Started by upstream project "BIOFORMATS-test-repo" build number 34
originally caused by:
Started by upstream project "Trigger" build number 38
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins18034158747876165318.sh
+ '[' hitachi = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_4580_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:22:15,635 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:22:15,637 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 01:22:15,637 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:15,638 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:22:15,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:22:15,638 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:22:15,638 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:22:15,638 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:15,639 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:22:15,639 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:22:15,639 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:22:15,639 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:22:15,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:22:15,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:22:15,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:22:15,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:22:15,994 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:22:15,994 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:22:15,995 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:22:15,995 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:22:15,995 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 01:22:15,997 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 01:22:15,997 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 358 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-15 01:22:16,012] [main] java.version = 1.8.0_342
[testng] 01:22:16,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:22:16,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:16,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_01-22-16.log]
[testng] 01:22:16,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-04-15 01:22:16,096] [main] testng.directory = /data
[testng] [2024-04-15 01:22:16,097] [main] testng.configDirectory = /config
[testng] [2024-04-15 01:22:16,117] [main] testng.multiplier = 1.0
[testng] [2024-04-15 01:22:16,117] [main] testng.in-memory = false
[testng] [2024-04-15 01:22:16,117] [main] testng.allow-missing = false
[testng] [2024-04-15 01:22:16,117] [main] user.language = fr
[testng] [2024-04-15 01:22:16,117] [main] user.country = FR
[testng] [2024-04-15 01:22:16,118] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-04-15 01:22:17,490] [main] ----------------------------------------
[testng] [2024-04-15 01:22:17,490] [main] Total files: 21
[testng] [2024-04-15 01:22:17,490] [main] Scan time: 1.372 s (65 ms/file)
[testng] [2024-04-15 01:22:17,490] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-15 01:22:19,862] [pool-1-thread-1] Initializing /data/stefan/001_q16.txt:
[testng] 01:22:19,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:22:19,863 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:19,864 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_01-22-19.log]
[testng] 01:22:19,864 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b31ec6f - End of configuration.
[testng] [2024-04-15 01:22:19,916] [pool-1-thread-12] Initializing /data/stefan/001_q10.txt:
[testng] 01:22:19,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:22:19,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:19,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_01-22-19.log]
[testng] 01:22:19,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3464e7e7 - End of configuration.
[testng] [2024-04-15 01:22:19,990] [pool-1-thread-11] Initializing /data/stefan/001_q11.txt:
[testng] 01:22:19,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:22:19,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:19,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_01-22-19.log]
[testng] 01:22:19,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@459d8a1a - End of configuration.
[testng] [2024-04-15 01:22:20,057] [pool-1-thread-10] Initializing /data/stefan/001_q15.txt:
[testng] 01:22:20,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:22:20,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_01-22-20.log]
[testng] 01:22:20,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66edaaf3 - End of configuration.
[testng] [2024-04-15 01:22:20,104] [pool-1-thread-9] Initializing /data/stefan/001_q12.txt:
[testng] 01:22:20,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:22:20,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_01-22-20.log]
[testng] 01:22:20,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f5cb62b - End of configuration.
[testng] [2024-04-15 01:22:20,177] [pool-1-thread-8] Initializing /data/stefan/001_q02.txt:
[testng] 01:22:20,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:22:20,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_01-22-20.log]
[testng] 01:22:20,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@515494b6 - End of configuration.
[testng] [2024-04-15 01:22:20,205] [pool-1-thread-7] Initializing /data/stefan/001_q04.txt:
[testng] 01:22:20,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:22:20,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_01-22-20.log]
[testng] 01:22:20,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d0bf3b6 - End of configuration.
[testng] [2024-04-15 01:22:20,232] [pool-1-thread-6] Initializing /data/stefan/001_q09.txt:
[testng] 01:22:20,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:22:20,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_01-22-20.log]
[testng] 01:22:20,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19190bd2 - End of configuration.
[testng] [2024-04-15 01:22:20,325] [pool-1-thread-5] Initializing /data/stefan/001_q05.txt:
[testng] 01:22:20,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:22:20,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_01-22-20.log]
[testng] 01:22:20,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2eb7a35b - End of configuration.
[testng] [2024-04-15 01:22:20,355] [pool-1-thread-4] Initializing /data/stefan/001_q14.txt:
[testng] 01:22:20,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:22:20,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_01-22-20.log]
[testng] 01:22:20,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d7528da - End of configuration.
[testng] [2024-04-15 01:22:20,392] [pool-1-thread-3] Initializing /data/stefan/001_q07.txt:
[testng] 01:22:20,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:22:20,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,393 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_01-22-20.log]
[testng] 01:22:20,393 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74d69bc1 - End of configuration.
[testng] [2024-04-15 01:22:20,468] [pool-1-thread-2] Initializing /data/stefan/001_q03.txt:
[testng] 01:22:20,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:22:20,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:22:20,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_01-22-20.log]
[testng] 01:22:20,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@481a2aa9 - End of configuration.
[testng] [2024-04-15 01:22:22,786] [pool-1-thread-10] Initializing /data/stefan/001_q17.txt:
[testng] [2024-04-15 01:22:22,862] [pool-1-thread-7] Initializing /data/stefan/001_q18.txt:
[testng] [2024-04-15 01:22:22,930] [pool-1-thread-1] Initializing /data/stefan/001_q13.txt:
[testng] [2024-04-15 01:22:22,969] [pool-1-thread-3] Initializing /data/stefan/001_q08.txt:
[testng] [2024-04-15 01:22:23,031] [pool-1-thread-12] Initializing /data/stefan/001_q06.txt:
[testng] [2024-04-15 01:22:23,053] [pool-1-thread-6] Initializing /data/stefan/001_q01.txt:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 15 seconds
Finished: SUCCESS