Started by upstream project "BIOFORMATS-test-repo" build number 290
originally caused by:
Started by upstream project "Trigger" build number 309
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins1327402417734671073.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_45838_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 03:16:11,278 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 03:16:11,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 03:16:11,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 03:16:11,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 03:16:11,421 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 03:16:11,421 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 03:16:11,421 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 03:16:11,422 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 03:16:11,422 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6340e5f0 - End of configuration.
[testng] 03:16:11,423 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1c7696c6 - Registering current configuration as safe fallback point
[testng] 03:16:11,423 |-INFO in ch.qos.logback.classic.util.ContextInitializer@60099951 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 459 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-14 03:16:11,432] [main] java.version = 11.0.16
[testng] 03:16:11,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 03:16:11,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:16:11,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-14_03-16-11.log]
[testng] 03:16:11,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2024-12-14 03:16:11,518] [main] testng.directory = /data
[testng] [2024-12-14 03:16:11,518] [main] testng.configDirectory = /config
[testng] [2024-12-14 03:16:11,530] [main] testng.multiplier = 1.0
[testng] [2024-12-14 03:16:11,532] [main] testng.in-memory = false
[testng] [2024-12-14 03:16:11,532] [main] testng.allow-missing = false
[testng] [2024-12-14 03:16:11,532] [main] user.language = en
[testng] [2024-12-14 03:16:11,532] [main] user.country = ${user.country}
[testng] [2024-12-14 03:16:11,532] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-12-14 03:22:18,538] [main] ----------------------------------------
[testng] [2024-12-14 03:22:18,538] [main] Total files: 268
[testng] [2024-12-14 03:22:18,538] [main] Scan time: 367.006 s (1369 ms/file)
[testng] [2024-12-14 03:22:18,538] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-14 03:32:58,635] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] 03:32:58,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:32:58,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:32:58,638 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-14_03-32-58.log]
[testng] 03:32:58,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45595aa9 - End of configuration.
[testng] [2024-12-14 03:33:00,269] [pool-1-thread-12] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] 03:33:00,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 03:33:00,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:00,271 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-14_03-33-00.log]
[testng] 03:33:00,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16463d5c - End of configuration.
[testng] [2024-12-14 03:33:01,207] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] 03:33:01,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 03:33:01,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:01,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-14_03-33-01.log]
[testng] 03:33:01,208 |-INFO in ch.qos.logback.core.sift.SiftProcessor@940f2a4 - End of configuration.
[testng] [2024-12-14 03:33:04,784] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] 03:33:04,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 03:33:04,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:04,785 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-14_03-33-04.log]
[testng] 03:33:04,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29246b14 - End of configuration.
[testng] [2024-12-14 03:33:05,756] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] 03:33:05,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 03:33:05,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:05,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-14_03-33-05.log]
[testng] 03:33:05,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@753072a9 - End of configuration.
[testng] [2024-12-14 03:33:07,086] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] 03:33:07,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 03:33:07,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:07,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-14_03-33-07.log]
[testng] 03:33:07,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35888df0 - End of configuration.
[testng] [2024-12-14 03:33:08,220] [pool-1-thread-7] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] 03:33:08,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 03:33:08,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:08,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-14_03-33-08.log]
[testng] 03:33:08,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2898d8ff - End of configuration.
[testng] [2024-12-14 03:33:12,203] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] 03:33:12,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 03:33:12,203 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:12,204 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-14_03-33-12.log]
[testng] 03:33:12,204 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b074e8 - End of configuration.
[testng] [2024-12-14 03:33:13,137] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] 03:33:13,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:33:13,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:13,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-14_03-33-13.log]
[testng] 03:33:13,139 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41e01734 - End of configuration.
[testng] [2024-12-14 03:33:14,143] [pool-1-thread-4] Initializing /data/steve/FITS/M13.fits:
[testng] 03:33:14,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 03:33:14,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:14,143 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-14_03-33-14.log]
[testng] 03:33:14,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63f6170 - End of configuration.
[testng] [2024-12-14 03:33:14,473] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] 03:33:14,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:33:14,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:14,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-14_03-33-14.log]
[testng] 03:33:14,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6017a6cb - End of configuration.
[testng] [2024-12-14 03:33:18,470] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] 03:33:18,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:33:18,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:33:18,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-14_03-33-18.log]
[testng] 03:33:18,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@90076a9 - End of configuration.
[testng] [2024-12-14 03:33:27,743] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-12-14 03:33:32,450] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-12-14 03:33:34,672] [pool-1-thread-10] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-12-14 03:33:38,319] [pool-1-thread-9] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-12-14 03:33:41,676] [pool-1-thread-5] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-12-14 03:33:45,450] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-12-14 03:33:49,093] [pool-1-thread-12] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] [2024-12-14 03:34:00,222] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-12-14 03:34:01,613] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-12-14 03:34:03,462] [pool-1-thread-8] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-12-14 03:34:07,441] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-12-14 03:34:08,112] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-12-14 03:34:09,888] [pool-1-thread-3] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-12-14 03:34:10,893] [pool-1-thread-2] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-12-14 03:34:14,521] [pool-1-thread-11] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2024-12-14 03:34:21,370] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-12-14 03:34:24,997] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-12-14 03:34:27,169] [pool-1-thread-5] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-12-14 03:34:28,897] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-12-14 03:34:32,958] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-12-14 03:34:34,126] [pool-1-thread-10] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-12-14 03:34:37,782] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-12-14 03:34:39,636] [pool-1-thread-7] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-12-14 03:34:44,368] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-12-14 03:34:45,148] [pool-1-thread-4] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-12-14 03:34:47,301] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-12-14 03:34:49,092] [pool-1-thread-12] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-12-14 03:34:51,041] [pool-1-thread-9] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-12-14 03:34:52,161] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2024-12-14 03:34:53,249] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-12-14 03:34:54,397] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-12-14 03:34:59,260] [pool-1-thread-7] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-12-14 03:35:02,607] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-12-14 03:35:04,774] [pool-1-thread-5] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-12-14 03:35:08,508] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-12-14 03:35:12,074] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-12-14 03:35:13,000] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-12-14 03:35:13,750] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-12-14 03:35:14,802] [pool-1-thread-8] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2024-12-14 03:35:20,030] [pool-1-thread-3] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-12-14 03:35:21,450] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-12-14 03:35:26,125] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-12-14 03:35:31,301] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-12-14 03:35:31,932] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-12-14 03:35:33,097] [pool-1-thread-10] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-12-14 03:35:36,274] [pool-1-thread-2] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-12-14 03:35:36,588] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-12-14 03:35:40,012] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-12-14 03:35:45,501] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-12-14 03:35:49,577] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-12-14 03:35:53,111] [pool-1-thread-5] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-12-14 03:35:54,709] [pool-1-thread-6] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-12-14 03:35:55,552] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-12-14 03:35:59,439] [pool-1-thread-11] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-12-14 03:36:00,960] [pool-1-thread-8] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-12-14 03:36:04,182] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-12-14 03:36:05,264] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-12-14 03:36:12,743] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-12-14 03:36:16,667] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-12-14 03:36:17,856] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-12-14 03:36:18,960] [pool-1-thread-7] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2024-12-14 03:36:23,274] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-12-14 03:36:24,825] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-12-14 03:36:25,535] [pool-1-thread-5] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-12-14 03:36:29,767] [pool-1-thread-12] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-12-14 03:36:32,425] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-12-14 03:36:37,905] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-12-14 03:36:39,181] [pool-1-thread-10] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-12-14 03:36:39,924] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-12-14 03:36:41,218] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-12-14 03:36:42,262] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-12-14 03:36:43,261] [pool-1-thread-3] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-12-14 03:36:45,255] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-12-14 03:36:45,592] [pool-1-thread-9] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-12-14 03:36:51,411] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-12-14 03:36:58,795] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2024-12-14 03:37:04,666] [pool-1-thread-6] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-12-14 03:37:08,623] [pool-1-thread-10] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-12-14 03:37:13,635] [pool-1-thread-7] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-12-14 03:37:15,797] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-12-14 03:37:16,439] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-12-14 03:37:17,300] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-12-14 03:37:18,862] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] [2024-12-14 03:37:20,249] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-12-14 03:37:25,339] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2024-12-14 03:37:33,044] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-12-14 03:37:33,860] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-12-14 03:37:35,236] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-12-14 03:37:40,280] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2024-12-14 03:37:40,951] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-12-14 03:37:42,953] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-12-14 03:37:44,354] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-12-14 03:37:48,064] [pool-1-thread-3] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-12-14 03:37:48,483] [pool-1-thread-8] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-12-14 03:37:51,308] [pool-1-thread-10] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-12-14 03:37:54,860] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-12-14 03:37:56,323] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-12-14 03:37:57,833] [pool-1-thread-4] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-12-14 03:37:58,872] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-12-14 03:38:03,564] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2024-12-14 03:38:04,907] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-12-14 03:38:06,278] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-12-14 03:38:07,911] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-12-14 03:38:14,238] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-12-14 03:38:18,643] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-12-14 03:38:20,575] [pool-1-thread-2] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-12-14 03:38:21,780] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-12-14 03:38:23,355] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-12-14 03:38:24,434] [pool-1-thread-1] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-12-14 03:38:27,715] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-12-14 03:38:31,646] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-12-14 03:38:33,540] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-12-14 03:38:34,844] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-12-14 03:38:35,591] [pool-1-thread-9] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-12-14 03:38:40,472] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-12-14 03:38:42,261] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-12-14 03:38:44,077] [pool-1-thread-3] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2024-12-14 03:38:48,544] [pool-1-thread-6] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-12-14 03:38:49,688] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-12-14 03:38:51,222] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-12-14 03:38:53,427] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-12-14 03:38:56,136] [pool-1-thread-4] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-12-14 03:38:57,695] [pool-1-thread-5] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-12-14 03:39:02,029] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-12-14 03:39:02,997] [pool-1-thread-12] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-12-14 03:39:09,483] [pool-1-thread-6] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-12-14 03:39:13,595] [pool-1-thread-8] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-12-14 03:39:15,889] [pool-1-thread-2] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-12-14 03:39:17,805] [pool-1-thread-11] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-12-14 03:39:19,188] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-12-14 03:39:21,567] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] [2024-12-14 03:39:22,294] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-12-14 03:39:23,643] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-12-14 03:39:24,883] [pool-1-thread-1] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-12-14 03:39:26,133] [pool-1-thread-3] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-12-14 03:39:35,886] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-12-14 03:39:38,834] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-12-14 03:39:41,017] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-12-14 03:39:44,017] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-12-14 03:39:45,671] [pool-1-thread-7] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-12-14 03:39:47,105] [pool-1-thread-1] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-12-14 03:39:49,580] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-12-14 03:39:52,321] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-12-14 03:39:53,734] [pool-1-thread-4] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-12-14 03:39:58,280] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-12-14 03:39:59,737] [pool-1-thread-12] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-12-14 03:40:02,247] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-12-14 03:40:04,441] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 24 minutes 14 seconds
Finished: SUCCESS