Started by upstream project "BIOFORMATS-test-repo" build number 294
originally caused by:
Started by upstream project "Trigger" build number 313
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9447568818308138219.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_46409_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:25:02,597 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:25:02,598 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 00:25:02,598 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:02,599 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:02,599 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:25:02,600 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:25:02,600 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:25:02,600 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:02,600 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:02,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:25:02,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:25:02,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:25:02,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:25:02,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:25:02,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:25:02,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:25:02,787 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:25:02,787 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:25:02,787 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:25:02,788 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:25:02,788 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 00:25:02,789 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 00:25:02,789 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 189 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-18 00:25:02,797] [main] java.version = 17.0.2
[testng] 00:25:02,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:25:02,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:02,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-18_00-25-02.log]
[testng] 00:25:02,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2024-12-18 00:25:02,842] [main] testng.directory = /data
[testng] [2024-12-18 00:25:02,843] [main] testng.configDirectory = /config
[testng] [2024-12-18 00:25:02,851] [main] testng.multiplier = 1.0
[testng] [2024-12-18 00:25:02,851] [main] testng.in-memory = false
[testng] [2024-12-18 00:25:02,852] [main] testng.allow-missing = false
[testng] [2024-12-18 00:25:02,852] [main] user.language = en
[testng] [2024-12-18 00:25:02,852] [main] user.country = ${user.country}
[testng] [2024-12-18 00:25:02,852] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-12-18 00:25:37,980] [main] ----------------------------------------
[testng] [2024-12-18 00:25:37,980] [main] Total files: 103
[testng] [2024-12-18 00:25:37,980] [main] Scan time: 35.128 s (341 ms/file)
[testng] [2024-12-18 00:25:37,980] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-18 00:26:18,367] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] 00:26:18,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:26:18,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:18,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-18_00-26-18.log]
[testng] 00:26:18,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15dfb938 - End of configuration.
[testng] [2024-12-18 00:26:18,445] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] 00:26:18,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:26:18,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:18,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-18_00-26-18.log]
[testng] 00:26:18,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f97447d - End of configuration.
[testng] [2024-12-18 00:26:19,179] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] 00:26:19,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:26:19,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:19,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-18_00-26-19.log]
[testng] 00:26:19,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64a030c5 - End of configuration.
[testng] [2024-12-18 00:26:19,568] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] 00:26:19,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:26:19,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:19,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-18_00-26-19.log]
[testng] 00:26:19,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74cd3efb - End of configuration.
[testng] [2024-12-18 00:26:19,656] [pool-1-thread-9] Initializing /data/jay/ViewDMtest.dm3:
[testng] 00:26:19,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:26:19,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:19,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-18_00-26-19.log]
[testng] 00:26:19,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b9b5fc7 - End of configuration.
[testng] [2024-12-18 00:26:19,745] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] 00:26:19,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:26:19,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:19,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-18_00-26-19.log]
[testng] 00:26:19,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32334445 - End of configuration.
[testng] [2024-12-18 00:26:20,460] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] 00:26:20,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:26:20,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:20,461 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-18_00-26-20.log]
[testng] 00:26:20,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@acf3e66 - End of configuration.
[testng] [2024-12-18 00:26:21,810] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] 00:26:21,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:26:21,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:21,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-18_00-26-21.log]
[testng] 00:26:21,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c0e4c7f - End of configuration.
[testng] [2024-12-18 00:26:22,132] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] 00:26:22,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:26:22,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:22,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-18_00-26-22.log]
[testng] 00:26:22,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e8e019c - End of configuration.
[testng] [2024-12-18 00:26:22,326] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3:
[testng] 00:26:22,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:26:22,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:22,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-18_00-26-22.log]
[testng] 00:26:22,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@506f395b - End of configuration.
[testng] [2024-12-18 00:26:22,379] [pool-1-thread-3] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] 00:26:22,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:26:22,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:22,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-18_00-26-22.log]
[testng] 00:26:22,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4224b226 - End of configuration.
[testng] [2024-12-18 00:26:22,434] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] 00:26:22,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:26:22,434 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:22,435 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-18_00-26-22.log]
[testng] 00:26:22,435 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f07160b - End of configuration.
[testng] [2024-12-18 00:26:27,501] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-12-18 00:26:27,823] [pool-1-thread-5] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-12-18 00:26:30,249] [pool-1-thread-10] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-12-18 00:26:30,466] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-12-18 00:26:30,718] [pool-1-thread-9] Initializing /data/jay/camtest1.dm3:
[testng] [2024-12-18 00:26:30,892] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-12-18 00:26:32,624] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-12-18 00:26:33,577] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-12-18 00:26:33,760] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3:
[testng] [2024-12-18 00:26:35,633] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-12-18 00:26:35,970] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-12-18 00:26:36,534] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-12-18 00:26:36,716] [pool-1-thread-3] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-12-18 00:26:36,923] [pool-1-thread-10] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-12-18 00:26:37,501] [pool-1-thread-8] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-12-18 00:26:37,721] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-12-18 00:26:38,262] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-12-18 00:26:41,001] [pool-1-thread-4] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-12-18 00:26:42,016] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-12-18 00:26:43,643] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-12-18 00:26:45,756] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-12-18 00:26:46,909] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-12-18 00:26:47,217] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-12-18 00:26:47,427] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-12-18 00:26:49,116] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-12-18 00:26:50,266] [pool-1-thread-8] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-12-18 00:26:50,489] [pool-1-thread-10] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-12-18 00:26:50,648] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-12-18 00:26:51,694] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-12-18 00:26:53,997] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-12-18 00:26:55,317] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-12-18 00:26:55,438] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-12-18 00:26:56,846] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-12-18 00:26:57,648] [pool-1-thread-1] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-12-18 00:26:58,129] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-12-18 00:26:58,322] [pool-1-thread-9] Initializing /data/qa-7642/8.dm4:
[testng] [2024-12-18 00:26:59,371] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-12-18 00:27:01,208] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-12-18 00:27:01,705] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-12-18 00:27:01,974] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-12-18 00:27:02,204] [pool-1-thread-11] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-12-18 00:27:02,282] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-12-18 00:27:02,411] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-12-18 00:27:02,555] [pool-1-thread-2] Initializing /data/jay/dnasample.tif:
[testng] [2024-12-18 00:27:05,512] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-12-18 00:27:07,851] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-12-18 00:27:08,241] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-12-18 00:27:08,574] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-12-18 00:27:09,418] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-12-18 00:27:10,198] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-12-18 00:27:11,456] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-12-18 00:27:14,039] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-12-18 00:27:14,400] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-12-18 00:27:16,486] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-12-18 00:27:17,185] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2024-12-18 00:27:20,190] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-12-18 00:27:21,099] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-12-18 00:27:21,901] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-12-18 00:27:24,143] [pool-1-thread-4] Initializing /data/qa-21761/example.dm4:
[testng] [2024-12-18 00:27:24,791] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-12-18 00:27:25,705] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-12-18 00:27:28,472] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-12-18 00:27:32,636] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-12-18 00:27:36,228] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-12-18 00:27:36,894] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-12-18 00:27:40,906] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-12-18 00:27:41,261] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-12-18 00:27:41,729] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-12-18 00:27:42,977] [pool-1-thread-10] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-12-18 00:27:43,678] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-12-18 00:27:44,476] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-12-18 00:27:44,701] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-12-18 00:27:45,268] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-12-18 00:27:46,157] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-12-18 00:27:46,986] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-12-18 00:27:47,481] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-12-18 00:27:48,185] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-12-18 00:27:48,948] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-12-18 00:27:49,631] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-12-18 00:27:49,878] [pool-1-thread-11] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-12-18 00:27:50,883] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-12-18 00:27:51,251] [pool-1-thread-4] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-12-18 00:27:51,541] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-12-18 00:27:51,955] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-12-18 00:27:55,853] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-12-18 00:27:56,828] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 3 minutes 15 seconds
Finished: SUCCESS