Started by upstream project "BIOFORMATS-test-repo" build number 294
originally caused by:
 Started by upstream project "Trigger" build number 313
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins9389994477020762849.sh
+ '[' imaris = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_46524_merge_ci -v /uod/idr/repos/curated/imaris:/data -v /uod/idr-scratch/merge-ci/curated/imaris:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 10:59:31,834 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 10:59:31,836 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 10:59:31,836 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 10:59:31,836 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 10:59:31,837 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 10:59:31,837 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 10:59:31,837 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 10:59:31,837 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 10:59:31,838 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 10:59:31,838 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 10:59:31,839 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 10:59:31,839 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 10:59:31,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 10:59:31,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 10:59:32,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 10:59:32,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 10:59:32,022 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 10:59:32,022 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 10:59:32,022 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 10:59:32,022 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 10:59:32,023 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 10:59:32,024 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 10:59:32,024 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 186 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-18 10:59:32,032] [main] java.version = 17.0.2
   [testng] 10:59:32,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 10:59:32,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:59:32,074 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-18_10-59-32.log]
   [testng] 10:59:32,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-12-18 10:59:32,077] [main] testng.directory = /data
   [testng] [2024-12-18 10:59:32,078] [main] testng.configDirectory = /config
   [testng] [2024-12-18 10:59:32,086] [main] testng.multiplier = 1.0
   [testng] [2024-12-18 10:59:32,086] [main] testng.in-memory = false
   [testng] [2024-12-18 10:59:32,087] [main] testng.allow-missing = false
   [testng] [2024-12-18 10:59:32,087] [main] user.language = en
   [testng] [2024-12-18 10:59:32,087] [main] user.country = ${user.country}
   [testng] [2024-12-18 10:59:32,087] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-12-18 11:01:14,830] [main] ----------------------------------------
   [testng] [2024-12-18 11:01:14,830] [main] Total files: 73
   [testng] [2024-12-18 11:01:14,831] [main] Scan time: 102.743 s (1407 ms/file)
   [testng] [2024-12-18 11:01:14,831] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 63 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-18 11:03:01,737] [pool-1-thread-1] Initializing /data/generated/mri-stack-original.ims: 
   [testng] 11:03:01,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 11:03:01,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:01,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-18_11-03-01.log]
   [testng] 11:03:01,739 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e875d9a - End of configuration.
   [testng] [2024-12-18 11:03:02,250] [pool-1-thread-12] Initializing /data/jason/imaris_5_5_demoimages/SwimmingAlgae.ims: 
   [testng] 11:03:02,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 11:03:02,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:02,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-18_11-03-02.log]
   [testng] 11:03:02,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ef381ae - End of configuration.
   [testng] [2024-12-18 11:03:03,224] [pool-1-thread-11] Initializing /data/jason/imaris_5_5_demoimages/PlantCell.ims: 
   [testng] 11:03:03,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 11:03:03,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:03,225 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-18_11-03-03.log]
   [testng] 11:03:03,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79c94a75 - End of configuration.
   [testng] [2024-12-18 11:03:04,309] [pool-1-thread-10] Initializing /data/jake/p75Cherry M2 010-3~B.ims: 
   [testng] 11:03:04,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 11:03:04,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:04,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-18_11-03-04.log]
   [testng] 11:03:04,310 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2118b06e - End of configuration.
   [testng] [2024-12-18 11:03:05,393] [pool-1-thread-9] Initializing /data/qa-17522/2016-12-14_08.43.34_Sample Prefix_WAINWRIGHT James_Protocol.ims: 
   [testng] 11:03:05,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 11:03:05,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:05,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-18_11-03-05.log]
   [testng] 11:03:05,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18a2fb10 - End of configuration.
   [testng] [2024-12-18 11:03:12,208] [pool-1-thread-8] Initializing /data/niko/imaris-testfile_5x5x5.ims: 
   [testng] 11:03:12,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 11:03:12,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:12,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-18_11-03-12.log]
   [testng] 11:03:12,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34f231d - End of configuration.
   [testng] [2024-12-18 11:03:13,677] [pool-1-thread-7] Initializing /data/generated/10-31_E_t0004.ims: 
   [testng] 11:03:13,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 11:03:13,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:13,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-18_11-03-13.log]
   [testng] 11:03:13,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c66d647 - End of configuration.
   [testng] [2024-12-18 11:03:14,271] [pool-1-thread-6] Initializing /data/generated/10-31_E_t0013.ims: 
   [testng] 11:03:14,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 11:03:14,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:14,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-18_11-03-14.log]
   [testng] 11:03:14,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b785b07 - End of configuration.
   [testng] [2024-12-18 11:03:14,901] [pool-1-thread-5] Initializing /data/public/davemason/Convallaria_3C_3T_2x2grid_confocal.ims: 
   [testng] 11:03:14,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 11:03:14,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:14,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-18_11-03-14.log]
   [testng] 11:03:14,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f5290be - End of configuration.
   [testng] [2024-12-18 11:03:16,215] [pool-1-thread-4] Initializing /data/public/davemason/Convallaria_3C_3T_35Z_confocal_deconvolved_IMS3.ims: 
   [testng] 11:03:16,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 11:03:16,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:16,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-18_11-03-16.log]
   [testng] 11:03:16,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bcda2e5 - End of configuration.
   [testng] [2024-12-18 11:03:17,973] [pool-1-thread-3] Initializing /data/public/eliana/retina_large.ims: 
   [testng] 11:03:17,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 11:03:17,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:17,974 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-18_11-03-17.log]
   [testng] 11:03:17,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3269198b - End of configuration.
   [testng] [2024-12-18 11:03:19,443] [pool-1-thread-2] Initializing /data/public/davemason/TransFactors_2C_SRRF.ims: 
   [testng] 11:03:19,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 11:03:19,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 11:03:19,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-18_11-03-19.log]
   [testng] 11:03:19,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8e29a80 - End of configuration.

BUILD SUCCESSFUL
Total time: 5 minutes 34 seconds
Finished: SUCCESS