Started by upstream project "BIOFORMATS-test-repo" build number 296
originally caused by:
Started by upstream project "Trigger" build number 315
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10
[BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins10179179445544167449.sh
+ '[' apng = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_46865_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 04:24:34,974 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 04:24:34,976 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 04:24:34,976 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 04:24:34,977 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 04:24:34,977 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 04:24:34,977 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 04:24:34,977 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 04:24:34,977 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 04:24:34,978 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 04:24:34,978 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 04:24:34,978 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 04:24:34,978 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 04:24:35,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 04:24:35,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 04:24:35,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 04:24:35,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 04:24:35,236 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 04:24:35,236 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 04:24:35,236 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 04:24:35,237 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 04:24:35,237 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 04:24:35,238 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 04:24:35,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 260 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-20 04:24:35,247] [main] java.version = 1.8.0_342
[testng] 04:24:35,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 04:24:35,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:35,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-20_04-24-35.log]
[testng] 04:24:35,297 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-12-20 04:24:35,298] [main] testng.directory = /data
[testng] [2024-12-20 04:24:35,299] [main] testng.configDirectory = /config
[testng] [2024-12-20 04:24:35,310] [main] testng.multiplier = 1.0
[testng] [2024-12-20 04:24:35,311] [main] testng.in-memory = false
[testng] [2024-12-20 04:24:35,311] [main] testng.allow-missing = false
[testng] [2024-12-20 04:24:35,311] [main] user.language = en
[testng] [2024-12-20 04:24:35,311] [main] user.country = ${user.country}
[testng] [2024-12-20 04:24:35,311] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-12-20 04:24:35,951] [main] ----------------------------------------
[testng] [2024-12-20 04:24:35,951] [main] Total files: 21
[testng] [2024-12-20 04:24:35,951] [main] Scan time: 0.64 s (30 ms/file)
[testng] [2024-12-20 04:24:35,951] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 21 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-20 04:24:42,947] [pool-1-thread-1] Initializing /data/samples/daniel_coltri_two.png:
[testng] 04:24:42,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 04:24:42,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:42,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-20_04-24-42.log]
[testng] 04:24:42,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2caa6df7 - End of configuration.
[testng] [2024-12-20 04:24:43,036] [pool-1-thread-12] Initializing /data/samples/chompy2.png:
[testng] 04:24:43,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 04:24:43,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-20_04-24-43.log]
[testng] 04:24:43,038 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d5bee4 - End of configuration.
[testng] [2024-12-20 04:24:43,073] [pool-1-thread-11] Initializing /data/samples/spinfox.png:
[testng] 04:24:43,073 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 04:24:43,073 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,074 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-20_04-24-43.log]
[testng] 04:24:43,074 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4331f654 - End of configuration.
[testng] [2024-12-20 04:24:43,113] [pool-1-thread-10] Initializing /data/samples/PhugAnimation3.png:
[testng] 04:24:43,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 04:24:43,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-20_04-24-43.log]
[testng] 04:24:43,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4863c78e - End of configuration.
[testng] [2024-12-20 04:24:43,157] [pool-1-thread-9] Initializing /data/samples/atom.png:
[testng] 04:24:43,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 04:24:43,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-20_04-24-43.log]
[testng] 04:24:43,159 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8ad204f - End of configuration.
[testng] [2024-12-20 04:24:43,196] [pool-1-thread-8] Initializing /data/samples/daniel_coltri_one.png:
[testng] 04:24:43,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 04:24:43,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-20_04-24-43.log]
[testng] 04:24:43,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@528d249b - End of configuration.
[testng] [2024-12-20 04:24:43,236] [pool-1-thread-7] Initializing /data/qa-7473/n.tif:
[testng] 04:24:43,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 04:24:43,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:43,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-20_04-24-43.log]
[testng] 04:24:43,237 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79a1f79f - End of configuration.
[testng] [2024-12-20 04:24:44,772] [pool-1-thread-6] Initializing /data/samples/Matrix.png:
[testng] 04:24:44,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 04:24:44,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:44,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-20_04-24-44.log]
[testng] 04:24:44,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18fd912e - End of configuration.
[testng] [2024-12-20 04:24:44,823] [pool-1-thread-5] Initializing /data/samples/william_wong02.png:
[testng] 04:24:44,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 04:24:44,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:44,824 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-20_04-24-44.log]
[testng] 04:24:44,825 |-INFO in ch.qos.logback.core.sift.SiftProcessor@561895fa - End of configuration.
[testng] [2024-12-20 04:24:44,884] [pool-1-thread-4] Initializing /data/samples/MoonPhases.png:
[testng] 04:24:44,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 04:24:44,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:44,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-20_04-24-44.log]
[testng] 04:24:44,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35367a55 - End of configuration.
[testng] [2024-12-20 04:24:44,926] [pool-1-thread-3] Initializing /data/qa-7473/x.png:
[testng] 04:24:44,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 04:24:44,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:44,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-20_04-24-44.log]
[testng] 04:24:44,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64b35cae - End of configuration.
[testng] [2024-12-20 04:24:44,968] [pool-1-thread-2] Initializing /data/colin/test.sfstdge.png:
[testng] 04:24:44,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 04:24:44,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 04:24:44,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-20_04-24-44.log]
[testng] 04:24:44,969 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b3e79ac - End of configuration.
[testng] [2024-12-20 04:24:48,063] [pool-1-thread-3] Initializing /data/samples/william_wong05.png:
[testng] [2024-12-20 04:24:48,115] [pool-1-thread-4] Initializing /data/samples/william_wong04.png:
[testng] [2024-12-20 04:24:48,160] [pool-1-thread-6] Initializing /data/samples/monkey_apng.png:
[testng] [2024-12-20 04:24:48,213] [pool-1-thread-12] Initializing /data/samples/joanna_viera01.png:
[testng] [2024-12-20 04:24:48,260] [pool-1-thread-5] Initializing /data/samples/phug_logo.png:
[testng] [2024-12-20 04:24:48,310] [pool-1-thread-8] Initializing /data/samples/william_wong01.png:
[testng] [2024-12-20 04:24:48,360] [pool-1-thread-9] Initializing /data/samples/StarV838.png:
[testng] [2024-12-20 04:24:48,409] [pool-1-thread-11] Initializing /data/samples/orbit.png:
[testng] [2024-12-20 04:24:48,457] [pool-1-thread-10] Initializing /data/samples/Sun.png:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1113, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 25 seconds
Finished: SUCCESS