Started by upstream project "BIOFORMATS-test-repo" build number 298 originally caused by: Started by upstream project "Trigger" build number 320 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins8766854084949331749.sh + '[' ome-tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47129_merge_ci -v /uod/idr/repos/curated/ome-tiff:/data -v /uod/idr-scratch/merge-ci/curated/ome-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:14:48,162 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:14:48,163 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 01:14:48,163 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:14:48,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:14:48,164 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:14:48,165 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:14:48,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:14:48,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:14:48,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:14:48,166 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:14:48,166 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:14:48,166 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:14:48,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:14:48,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:14:48,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:14:48,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:14:48,340 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:14:48,341 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:14:48,341 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:14:48,341 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:14:48,341 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 01:14:48,342 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 01:14:48,342 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 177 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-25 01:14:48,350] [main] java.version = 17.0.2 [testng] 01:14:48,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:14:48,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:14:48,390 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_01-14-48.log] [testng] 01:14:48,391 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-25 01:14:48,393] [main] testng.directory = /data [testng] [2024-12-25 01:14:48,393] [main] testng.configDirectory = /config [testng] [2024-12-25 01:14:48,401] [main] testng.multiplier = 1.0 [testng] [2024-12-25 01:14:48,402] [main] testng.in-memory = false [testng] [2024-12-25 01:14:48,402] [main] testng.allow-missing = false [testng] [2024-12-25 01:14:48,402] [main] user.language = en [testng] [2024-12-25 01:14:48,402] [main] user.country = ${user.country} [testng] [2024-12-25 01:14:48,402] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-25 01:21:54,650] [main] ---------------------------------------- [testng] [2024-12-25 01:21:54,650] [main] Total files: 4771 [testng] [2024-12-25 01:21:54,651] [main] Scan time: 426.248 s (89 ms/file) [testng] [2024-12-25 01:21:54,651] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 1455 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-25 02:17:55,975] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L02--S00--U00--V00--J00--X00--Y00--T02--Z00--C00.ome.tif: [testng] 02:17:55,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:17:55,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:17:55,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-25_02-17-55.log] [testng] 02:17:55,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f560131 - End of configuration. [testng] [2024-12-25 02:17:56,754] [pool-1-thread-12] Initializing /data/andor/iQMM_FURA_TIME177_WAVELENGTH1_0.ome.tif: [testng] 02:17:56,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:17:56,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:17:56,755 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-25_02-17-56.log] [testng] 02:17:56,755 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dbf430f - End of configuration. [testng] [2024-12-25 02:17:57,539] [pool-1-thread-11] Initializing /data/andor/iQMM_FURA_TIME101_WAVELENGTH1_0.ome.tif: [testng] 02:17:57,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:17:57,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:17:57,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-25_02-17-57.log] [testng] 02:17:57,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5141dd71 - End of configuration. [testng] [2024-12-25 02:17:58,388] [pool-1-thread-10] Initializing /data/tubhiswtTEST/tubhiswt4D.ome.tif: [testng] 02:17:58,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:17:58,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:17:58,388 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-25_02-17-58.log] [testng] 02:17:58,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e20ec8c - End of configuration. [testng] [2024-12-25 02:17:59,299] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y01/image--L05--S00--U00--V00--J00--X04--Y01--T05--Z00--C00.ome.tif: [testng] 02:17:59,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:17:59,299 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:17:59,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-25_02-17-59.log] [testng] 02:17:59,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ade342d - End of configuration. [testng] [2024-12-25 02:18:00,125] [pool-1-thread-8] Initializing /data/chris/Fig3/Fig 3B.ome.tiff: [testng] 02:18:00,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:18:00,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:00,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-25_02-18-00.log] [testng] 02:18:00,126 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6718c57 - End of configuration. [testng] [2024-12-25 02:18:00,909] [pool-1-thread-7] Initializing /data/peter/LA_ProtocolCombination_23.01.2012_16_29_52_1.ome.tif: [testng] 02:18:00,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:18:00,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:00,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-25_02-18-00.log] [testng] 02:18:00,911 |-INFO in ch.qos.logback.core.sift.SiftProcessor@288ff06f - End of configuration. [testng] [2024-12-25 02:18:02,004] [pool-1-thread-6] Initializing /data/martin/WTCFTR1-test.ome.tif: [testng] 02:18:02,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:18:02,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:02,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-25_02-18-02.log] [testng] 02:18:02,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ecca274 - End of configuration. [testng] [2024-12-25 02:18:02,834] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y02/image--L06--S00--U00--V00--J00--X01--Y02--T06--Z00--C00.ome.tif: [testng] 02:18:02,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:18:02,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:02,834 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-25_02-18-02.log] [testng] 02:18:02,835 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5374caab - End of configuration. [testng] [2024-12-25 02:18:03,555] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y06/image--L13--S00--U00--V00--J00--X04--Y06--T13--Z00--C00.ome.tif: [testng] 02:18:03,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:18:03,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:03,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-25_02-18-03.log] [testng] 02:18:03,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28560e30 - End of configuration. [testng] [2024-12-25 02:18:04,357] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y06/image--L04--S00--U00--V00--J00--X02--Y06--T04--Z00--C00.ome.tif: [testng] 02:18:04,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:18:04,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:04,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-25_02-18-04.log] [testng] 02:18:04,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2eb8bfbf - End of configuration. [testng] [2024-12-25 02:18:05,086] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y06/image--L11--S00--U00--V00--J00--X02--Y06--T11--Z00--C00.ome.tif: [testng] 02:18:05,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:18:05,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:05,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-25_02-18-05.log] [testng] 02:18:05,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19ede70e - End of configuration. [testng] [2024-12-25 02:18:13,754] [pool-1-thread-8] Initializing /data/oliver/LA_ProtocolCombination_12.10.2009_21_40_58_Marker_1__3 3.tif: [testng] [2024-12-25 02:18:18,455] [pool-1-thread-6] Initializing /data/andor/iQMM_FURA_TIME68_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:19,399] [pool-1-thread-10] Initializing /data/andor/iQMM_FURA_TIME189_WAVELENGTH1_0.ome.tif: [testng] [2024-12-25 02:18:20,458] [pool-1-thread-7] Initializing /data/public/2011-06/companion/multifile.companion.ome: [testng] [2024-12-25 02:18:24,883] [pool-1-thread-3] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.ome.tiff: [testng] [2024-12-25 02:18:26,061] [pool-1-thread-9] Initializing /data/ruben/Test_Ruben_001/Test_Ruben_001--W0001--P001--Z001--C01--T00001.ome.tif: [testng] [2024-12-25 02:18:34,160] [pool-1-thread-4] Initializing /data/andor/iQMM_FURA_TIME149_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:35,096] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y04/image--L06--S00--U00--V00--J00--X06--Y04--T06--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:35,928] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y03/image--L11--S00--U00--V00--J00--X06--Y03--T11--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:36,717] [pool-1-thread-1] Initializing /data/andor/iQMM_FURA_TIME155_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:37,661] [pool-1-thread-11] Initializing /data/andor/iQMM_FURA_TIME104_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:38,568] [pool-1-thread-12] Initializing /data/andor/iQMM_FURA_TIME182_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:48,043] [pool-1-thread-6] Initializing /data/andor/iQMM_FURA_TIME181_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:49,057] [pool-1-thread-10] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y02/image--L11--S00--U00--V00--J00--X03--Y02--T11--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:51,579] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y01/image--L10--S00--U00--V00--J00--X00--Y01--T10--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:52,693] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y04/image--L04--S00--U00--V00--J00--X05--Y04--T04--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:53,759] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y06/image--L08--S00--U00--V00--J00--X02--Y06--T08--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:55,108] [pool-1-thread-11] Initializing /data/andor/iQMM_FURA_TIME184_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:18:56,122] [pool-1-thread-1] Initializing /data/prairie/TSeries-12062007-1400-093/TSeries-12062007-1400-093.xml: [testng] [2024-12-25 02:18:57,243] [pool-1-thread-12] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y02/image--L08--S00--U00--V00--J00--X03--Y02--T08--Z00--C00.ome.tif: [testng] [2024-12-25 02:18:58,287] [pool-1-thread-7] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y06/image--L03--S00--U00--V00--J00--X02--Y06--T03--Z00--C00.ome.tif: [testng] [2024-12-25 02:19:05,007] [pool-1-thread-10] Initializing /data/andor/iQMM_FURA_TIME1_WAVELENGTH1_0.ome.tif: [testng] [2024-12-25 02:19:07,588] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y06/image--L12--S00--U00--V00--J00--X01--Y06--T12--Z00--C00.ome.tif: [testng] [2024-12-25 02:19:08,720] [pool-1-thread-6] Initializing 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Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y04/image--L08--S00--U00--V00--J00--X06--Y04--T08--Z00--C00.ome.tif: [testng] [2024-12-25 02:22:17,362] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y04/image--L11--S00--U00--V00--J00--X06--Y04--T11--Z00--C00.ome.tif: [testng] [2024-12-25 02:22:18,638] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y01/image--L14--S00--U00--V00--J00--X00--Y01--T14--Z00--C00.ome.tif: [testng] [2024-12-25 02:22:21,096] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y06/image--L11--S00--U00--V00--J00--X06--Y06--T11--Z00--C00.ome.tif: [testng] [2024-12-25 02:22:23,443] [pool-1-thread-6] Initializing /data/andor/iQMM_FURA_TIME167_WAVELENGTH1_0.ome.tif: [testng] [2024-12-25 02:22:27,605] [pool-1-thread-11] 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[testng] [2024-12-25 02:23:53,008] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y04/image--L14--S00--U00--V00--J00--X03--Y04--T14--Z00--C00.ome.tif: [testng] [2024-12-25 02:23:56,444] [pool-1-thread-8] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y04/image--L04--S00--U00--V00--J00--X04--Y04--T04--Z00--C00.ome.tif: [testng] [2024-12-25 02:23:58,806] [pool-1-thread-5] Initializing /data/oliver/LA_ProtocolCombination_12.10.2009_20_55_46_Marker__1 2.tif: [testng] [2024-12-25 02:24:00,325] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y02/image--L07--S00--U00--V00--J00--X01--Y02--T07--Z00--C00.ome.tif: [testng] [2024-12-25 02:24:03,461] [pool-1-thread-2] Initializing 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Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y05/image--L14--S00--U00--V00--J00--X01--Y05--T14--Z00--C00.ome.tif: [testng] [2024-12-25 02:24:47,676] [pool-1-thread-3] Initializing /data/andor/iQMM_FURA_TIME31_WAVELENGTH1_0.ome.tif: [testng] [2024-12-25 02:24:48,703] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y01/image--L09--S00--U00--V00--J00--X04--Y01--T09--Z00--C00.ome.tif: [testng] [2024-12-25 02:24:50,468] [pool-1-thread-2] Initializing /data/andor/iQMM_FURA_TIME33_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 02:24:53,097] [pool-1-thread-10] Initializing /data/public/2013-06/bioformats-artificial/multi-channel-z-series.ome.tif: [testng] [2024-12-25 02:24:57,021] [pool-1-thread-7] Initializing /data/andor/iQMM_FURA_TIME184_WAVELENGTH1_0.ome.tif: [testng] [2024-12-25 02:24:58,131] [pool-1-thread-11] Initializing 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/data/andor/iQMM_FURA_TIME126_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 03:38:02,572] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y02/image--L07--S00--U00--V00--J00--X03--Y02--T07--Z00--C00.ome.tif: [testng] [2024-12-25 03:38:03,667] [pool-1-thread-5] Initializing /data/andor/iQMM_FURA_TIME175_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 03:38:07,293] [pool-1-thread-4] Initializing /data/dominik/2009_09_11__14_26_33h__channel01.tif: [testng] [2024-12-25 03:38:08,700] [pool-1-thread-11] Initializing /data/chris/Fig1/Fig 1B-1min.ome.tiff: [testng] [2024-12-25 03:38:09,681] [pool-1-thread-10] Initializing /data/public/2016-06/tubhiswt-2D/tubhiswt_C0.ome.tif: [testng] [2024-12-25 03:38:15,357] [pool-1-thread-2] Initializing /data/andor/iQMM_FURA_TIME95_WAVELENGTH0_0.ome.tif: [testng] [2024-12-25 03:38:16,392] [pool-1-thread-1] Initializing /data/public/2008-09/z-series.ome.tiff: [testng] 04:35:25,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:35:25,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:35:25,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-25_04-35-25.log] [testng] 04:35:25,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12169655 - End of configuration. [testng] 05:21:30,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:21:30,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:21:30,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-25_05-21-30.log] [testng] 05:21:30,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ca6e73 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 77115, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 246 minutes 45 seconds Finished: SUCCESS