Started by upstream project "BIOFORMATS-test-repo" build number 4
originally caused by:
Started by upstream project "Trigger" build number 5
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins12479680815042318670.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_473_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:20:10,963 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:20:10,965 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 00:20:10,965 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:10,966 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:20:10,966 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:20:10,967 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:20:10,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:20:10,967 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:10,968 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:20:10,969 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:20:10,969 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:20:10,969 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:20:11,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:20:11,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:20:11,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:20:11,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:20:11,198 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:20:11,199 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:20:11,199 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:20:11,199 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:20:11,200 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 00:20:11,200 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 00:20:11,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 232 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-17 00:20:11,210] [main] java.version = 17.0.2
[testng] 00:20:11,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:20:11,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:20:11,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-17_00-20-11.log]
[testng] 00:20:11,257 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-03-17 00:20:11,259] [main] testng.directory = /data
[testng] [2024-03-17 00:20:11,260] [main] testng.configDirectory = /config
[testng] [2024-03-17 00:20:11,271] [main] testng.multiplier = 1.0
[testng] [2024-03-17 00:20:11,272] [main] testng.in-memory = false
[testng] [2024-03-17 00:20:11,273] [main] testng.allow-missing = false
[testng] [2024-03-17 00:20:11,273] [main] user.language = en
[testng] [2024-03-17 00:20:11,273] [main] user.country = ${user.country}
[testng] [2024-03-17 00:20:11,273] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-03-17 00:20:28,511] [main] ----------------------------------------
[testng] [2024-03-17 00:20:28,511] [main] Total files: 283
[testng] [2024-03-17 00:20:28,511] [main] Scan time: 17.238 s (60 ms/file)
[testng] [2024-03-17 00:20:28,511] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-17 00:29:37,632] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 00:29:37,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:29:37,633 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:37,634 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-17_00-29-37.log]
[testng] 00:29:37,634 |-INFO in ch.qos.logback.core.sift.SiftProcessor@684d5229 - End of configuration.
[testng] [2024-03-17 00:29:37,746] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] 00:29:37,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:29:37,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:37,747 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-17_00-29-37.log]
[testng] 00:29:37,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d51d4c9 - End of configuration.
[testng] [2024-03-17 00:29:37,839] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 00:29:37,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:29:37,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:37,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-17_00-29-37.log]
[testng] 00:29:37,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62e48ca7 - End of configuration.
[testng] [2024-03-17 00:29:37,999] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 00:29:37,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:29:37,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:38,000 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-17_00-29-38.log]
[testng] 00:29:38,000 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cdaec6d - End of configuration.
[testng] [2024-03-17 00:29:38,190] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] 00:29:38,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:29:38,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:38,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-17_00-29-38.log]
[testng] 00:29:38,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c78043 - End of configuration.
[testng] [2024-03-17 00:29:39,034] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] 00:29:39,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:29:39,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:39,035 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-17_00-29-39.log]
[testng] 00:29:39,035 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f807767 - End of configuration.
[testng] [2024-03-17 00:29:39,114] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir:
[testng] 00:29:39,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:29:39,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:39,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-17_00-29-39.log]
[testng] 00:29:39,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d883a6f - End of configuration.
[testng] [2024-03-17 00:29:55,823] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] 00:29:55,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:29:55,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:55,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-17_00-29-55.log]
[testng] 00:29:55,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c4b851f - End of configuration.
[testng] [2024-03-17 00:29:56,091] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 00:29:56,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:29:56,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:56,093 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-17_00-29-56.log]
[testng] 00:29:56,094 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cdc06bc - End of configuration.
[testng] [2024-03-17 00:29:56,178] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] 00:29:56,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:29:56,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:56,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-17_00-29-56.log]
[testng] 00:29:56,179 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13718446 - End of configuration.
[testng] [2024-03-17 00:29:56,996] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] 00:29:56,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:29:56,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:56,997 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-17_00-29-56.log]
[testng] 00:29:56,997 |-INFO in ch.qos.logback.core.sift.SiftProcessor@332cc95 - End of configuration.
[testng] [2024-03-17 00:29:57,144] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] 00:29:57,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:29:57,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:29:57,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-17_00-29-57.log]
[testng] 00:29:57,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20984af4 - End of configuration.
[testng] [2024-03-17 00:29:59,820] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-03-17 00:30:00,370] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-03-17 00:30:00,691] [pool-1-thread-8] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-03-17 00:30:00,987] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-03-17 00:30:01,236] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-03-17 00:30:01,681] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-03-17 00:30:01,894] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-03-17 00:30:02,635] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-03-17 00:30:02,790] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-03-17 00:30:04,460] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-03-17 00:30:04,839] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-03-17 00:30:06,855] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-03-17 00:30:07,181] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-03-17 00:30:07,721] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-03-17 00:30:08,254] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-03-17 00:30:08,586] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-03-17 00:30:08,739] [pool-1-thread-11] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-03-17 00:31:40,659] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-03-17 00:31:40,878] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-03-17 00:31:43,106] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-03-17 00:31:43,338] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-03-17 00:31:43,619] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-03-17 00:31:43,820] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-03-17 00:31:43,972] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-03-17 00:31:44,134] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-03-17 00:31:44,322] [pool-1-thread-9] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-03-17 00:31:44,732] [pool-1-thread-9] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-03-17 00:31:50,222] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-03-17 00:31:52,227] [pool-1-thread-1] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-03-17 00:31:52,531] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-03-17 00:31:53,510] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-03-17 00:31:53,862] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-03-17 00:31:54,087] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-03-17 00:31:54,178] [pool-1-thread-5] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-03-17 00:31:57,286] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-03-17 00:31:57,873] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-03-17 00:31:58,053] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-03-17 00:31:58,257] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-03-17 00:31:58,698] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-03-17 00:31:59,111] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-03-17 00:32:00,541] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-03-17 00:32:00,802] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-03-17 00:32:02,204] [pool-1-thread-12] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-03-17 00:32:03,535] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-03-17 00:32:04,877] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-03-17 00:32:05,449] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-03-17 00:32:05,731] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-03-17 00:32:05,896] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-03-17 00:32:06,122] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-03-17 00:32:06,735] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-03-17 00:32:07,913] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-03-17 00:32:08,367] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-03-17 00:32:08,667] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-03-17 00:32:09,149] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-03-17 00:32:09,371] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-03-17 00:32:09,564] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-03-17 00:32:37,814] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-03-17 00:32:38,451] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-03-17 00:32:40,011] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-03-17 00:32:40,416] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-03-17 00:32:40,534] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-03-17 00:32:41,500] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-03-17 00:32:41,798] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-03-17 00:32:42,266] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-03-17 00:32:42,341] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-03-17 00:32:43,394] [pool-1-thread-12] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-03-17 00:32:44,049] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-03-17 00:32:44,624] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-03-17 00:32:44,811] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-03-17 00:32:44,949] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-03-17 00:32:45,135] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-03-17 00:32:45,220] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-03-17 00:32:45,919] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-03-17 00:32:46,567] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-03-17 00:32:47,637] [pool-1-thread-2] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-03-17 00:32:48,263] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-03-17 00:32:48,737] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-03-17 00:32:49,300] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-03-17 00:32:49,895] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-03-17 00:32:50,596] [pool-1-thread-1] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-03-17 00:32:50,878] [pool-1-thread-8] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-03-17 00:32:51,917] [pool-1-thread-10] Initializing /data/qa-17335/1.oir:
[testng] [2024-03-17 00:32:52,162] [pool-1-thread-12] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-03-17 00:32:52,955] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-03-17 00:32:53,103] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-03-17 00:32:53,382] [pool-1-thread-9] Initializing /data/olympus/XYZt.oir:
[testng] [2024-03-17 00:32:55,262] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-03-17 00:32:55,983] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-03-17 00:32:56,248] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-03-17 00:32:56,497] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-03-17 00:32:56,556] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-03-17 00:32:57,302] [pool-1-thread-6] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-03-17 00:33:19,367] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-03-17 00:33:28,837] [pool-1-thread-1] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-03-17 00:33:29,156] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-03-17 00:33:29,751] [pool-1-thread-10] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-03-17 00:33:30,080] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-03-17 00:33:30,282] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-03-17 00:33:30,766] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-03-17 00:33:31,309] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-03-17 00:33:32,498] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-03-17 00:33:32,855] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-03-17 00:33:33,485] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-03-17 00:33:33,682] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-03-17 00:33:34,091] [pool-1-thread-12] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-03-17 00:33:34,646] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-03-17 00:33:34,888] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-03-17 00:33:35,928] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-03-17 00:33:36,103] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-03-17 00:33:37,126] [pool-1-thread-12] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-03-17 00:33:37,650] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-03-17 00:33:38,288] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-03-17 00:33:38,537] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-03-17 00:33:39,082] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-03-17 00:33:39,327] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-03-17 00:33:39,646] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-03-17 00:33:40,339] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-03-17 00:33:40,694] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-03-17 00:33:40,937] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-03-17 00:33:41,414] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-03-17 00:33:41,506] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-03-17 00:33:42,094] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-03-17 00:33:42,437] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-03-17 00:33:42,972] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-03-17 00:33:43,657] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-03-17 00:33:44,154] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-03-17 00:33:44,338] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-03-17 00:33:44,563] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-03-17 00:33:44,950] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-03-17 00:33:45,285] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-03-17 00:33:46,218] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-03-17 00:33:49,143] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-03-17 00:33:49,455] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-03-17 00:33:49,929] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-03-17 00:33:50,968] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-03-17 00:33:51,074] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-03-17 00:33:51,661] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-03-17 00:33:52,212] [pool-1-thread-2] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-03-17 00:33:53,193] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-03-17 00:33:54,036] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-03-17 00:33:55,576] [pool-1-thread-12] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-03-17 00:33:55,872] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-03-17 00:33:56,312] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-03-17 00:34:43,765] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-03-17 00:34:43,988] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-03-17 00:34:44,228] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-03-17 00:34:46,348] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-03-17 00:34:46,728] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-03-17 00:34:47,848] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-03-17 00:34:48,388] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-03-17 00:34:48,723] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-03-17 00:34:49,168] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-03-17 00:35:12,098] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-03-17 00:35:13,070] [pool-1-thread-1] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-03-17 00:35:14,008] [pool-1-thread-5] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-03-17 00:35:14,586] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-03-17 00:35:18,567] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-03-17 00:35:19,464] [pool-1-thread-10] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-03-17 00:35:20,769] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-03-17 00:35:21,639] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-03-17 00:35:22,368] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-03-17 00:35:28,794] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-03-17 00:35:33,920] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-03-17 00:35:35,674] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-03-17 00:35:36,107] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-03-17 00:35:36,550] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-03-17 00:35:36,929] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-03-17 00:35:39,565] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-03-17 00:35:40,541] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-03-17 00:35:40,897] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-03-17 00:35:42,065] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-03-17 00:35:43,994] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-03-17 00:35:44,623] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-03-17 00:35:45,713] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 43 minutes 3 seconds
Finished: SUCCESS