Started by upstream project "BIOFORMATS-test-repo" build number 35 originally caused by: Started by upstream project "Trigger" build number 39 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins7053939458220690034.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_4740_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 12:06:39,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 12:06:39,396 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 12:06:39,396 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:39,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:39,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:06:39,398 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:06:39,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:06:39,398 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:39,399 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:39,399 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:06:39,400 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:06:39,400 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:06:39,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:06:39,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:06:39,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:06:39,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:06:39,709 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:06:39,709 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:06:39,709 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:06:39,710 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:06:39,710 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 12:06:39,711 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 12:06:39,712 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 313 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-15 12:06:39,727] [main] java.version = 1.8.0_342 [testng] 12:06:39,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:06:39,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:39,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_12-06-39.log] [testng] 12:06:39,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-15 12:06:39,804] [main] testng.directory = /data [testng] [2024-04-15 12:06:39,804] [main] testng.configDirectory = /config [testng] [2024-04-15 12:06:39,824] [main] testng.multiplier = 1.0 [testng] [2024-04-15 12:06:39,824] [main] testng.in-memory = false [testng] [2024-04-15 12:06:39,825] [main] testng.allow-missing = false [testng] [2024-04-15 12:06:39,825] [main] user.language = fr [testng] [2024-04-15 12:06:39,825] [main] user.country = FR [testng] [2024-04-15 12:06:39,825] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-15 12:06:55,727] [main] ---------------------------------------- [testng] [2024-04-15 12:06:55,727] [main] Total files: 4424 [testng] [2024-04-15 12:06:55,727] [main] Scan time: 15.902 s (3 ms/file) [testng] [2024-04-15 12:06:55,728] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-15 12:09:01,477] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] 12:09:01,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:09:01,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_12-09-01.log] [testng] 12:09:01,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a02a4e3 - End of configuration. [testng] [2024-04-15 12:09:01,515] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 12:09:01,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:09:01,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,516 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_12-09-01.log] [testng] 12:09:01,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ef981df - End of configuration. [testng] [2024-04-15 12:09:01,566] [pool-1-thread-11] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] 12:09:01,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:09:01,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_12-09-01.log] [testng] 12:09:01,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10dc80a6 - End of configuration. [testng] [2024-04-15 12:09:01,599] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] 12:09:01,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:09:01,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_12-09-01.log] [testng] 12:09:01,600 |-INFO in ch.qos.logback.core.sift.SiftProcessor@619122a7 - End of configuration. [testng] [2024-04-15 12:09:01,630] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] 12:09:01,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:09:01,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_12-09-01.log] [testng] 12:09:01,631 |-INFO in ch.qos.logback.core.sift.SiftProcessor@504788de - End of configuration. [testng] [2024-04-15 12:09:01,661] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 12:09:01,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:09:01,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_12-09-01.log] [testng] 12:09:01,662 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3314c78c - End of configuration. [testng] [2024-04-15 12:09:01,694] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] 12:09:01,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:09:01,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_12-09-01.log] [testng] 12:09:01,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@784bdc06 - End of configuration. [testng] [2024-04-15 12:09:01,726] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] 12:09:01,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:09:01,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_12-09-01.log] [testng] 12:09:01,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75ee6f06 - End of configuration. [testng] [2024-04-15 12:09:01,780] [pool-1-thread-5] Initializing /data/kevino/_BF_00005.tif: [testng] 12:09:01,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:09:01,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,781 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_12-09-01.log] [testng] 12:09:01,782 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f6a3410 - End of configuration. [testng] [2024-04-15 12:09:01,835] [pool-1-thread-4] Initializing /data/misc/9 h test.tif: [testng] 12:09:01,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:09:01,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,836 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_12-09-01.log] [testng] 12:09:01,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12746546 - End of configuration. [testng] [2024-04-15 12:09:01,861] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] 12:09:01,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:09:01,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,861 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_12-09-01.log] [testng] 12:09:01,862 |-INFO in ch.qos.logback.core.sift.SiftProcessor@283f5a17 - End of configuration. [testng] [2024-04-15 12:09:01,927] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 12:09:01,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:09:01,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:09:01,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_12-09-01.log] [testng] 12:09:01,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b0ee039 - End of configuration. [testng] [2024-04-15 12:09:04,442] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-04-15 12:09:04,470] [pool-1-thread-4] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-04-15 12:09:04,497] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-04-15 12:09:04,539] [pool-1-thread-11] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-04-15 12:09:04,563] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-04-15 12:09:04,609] [pool-1-thread-1] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-04-15 12:09:06,705] [pool-1-thread-6] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-04-15 12:09:06,774] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-04-15 12:09:06,793] [pool-1-thread-2] Initializing /data/stephane/d01&007.tif: [testng] [2024-04-15 12:09:06,814] [pool-1-thread-9] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-04-15 12:09:07,446] [pool-1-thread-10] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-04-15 12:09:07,491] [pool-1-thread-2] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-04-15 12:09:07,615] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-04-15 12:09:07,746] [pool-1-thread-4] Initializing /data/jeff/test36b.tif: [testng] [2024-04-15 12:09:07,771] [pool-1-thread-11] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-04-15 12:09:07,929] [pool-1-thread-6] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-04-15 12:09:08,106] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-04-15 12:09:08,312] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-04-15 12:09:08,337] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-04-15 12:09:08,974] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-04-15 12:09:09,511] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-04-15 12:09:09,733] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-04-15 12:09:09,800] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-04-15 12:09:09,877] [pool-1-thread-8] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-04-15 12:09:09,949] [pool-1-thread-7] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-04-15 12:09:10,034] [pool-1-thread-4] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-04-15 12:09:10,179] [pool-1-thread-10] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-04-15 12:09:10,593] [pool-1-thread-11] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-04-15 12:09:10,725] [pool-1-thread-2] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-04-15 12:09:10,759] [pool-1-thread-12] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-04-15 12:09:10,816] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-04-15 12:09:11,009] [pool-1-thread-7] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-04-15 12:09:11,118] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-04-15 12:09:11,225] [pool-1-thread-5] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-04-15 12:09:11,525] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-04-15 12:09:11,564] [pool-1-thread-11] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-04-15 12:09:11,623] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-04-15 12:09:11,681] [pool-1-thread-7] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-04-15 12:09:11,779] [pool-1-thread-5] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-04-15 12:09:11,941] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-04-15 12:09:12,276] [pool-1-thread-2] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-04-15 12:09:12,642] [pool-1-thread-5] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-04-15 12:09:12,665] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-04-15 12:09:12,727] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-04-15 12:09:13,083] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-04-15 12:09:13,171] [pool-1-thread-7] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-04-15 12:09:13,219] [pool-1-thread-8] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-04-15 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[2024-04-15 12:11:49,815] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-04-15 12:11:49,843] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-04-15 12:11:50,007] [pool-1-thread-1] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-04-15 12:11:50,386] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-04-15 12:11:50,457] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-04-15 12:11:50,564] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-04-15 12:11:50,923] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-04-15 12:11:51,135] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-04-15 12:11:51,162] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-04-15 12:11:51,660] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-04-15 12:11:51,883] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-04-15 12:11:51,995] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-04-15 12:11:52,285] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-04-15 12:11:52,413] [pool-1-thread-12] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] [2024-04-15 12:11:52,830] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-04-15 12:11:52,858] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-04-15 12:11:53,124] [pool-1-thread-6] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-04-15 12:11:53,169] [pool-1-thread-1] Initializing /data/stephane/001_z01.tif: [testng] [2024-04-15 12:11:53,218] [pool-1-thread-10] Initializing 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Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-04-15 12:11:54,510] [pool-1-thread-4] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-04-15 12:11:54,613] [pool-1-thread-12] Initializing /data/alexa/test4.tif: [testng] [2024-04-15 12:11:54,720] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] [2024-04-15 12:11:54,878] [pool-1-thread-7] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-04-15 12:11:54,977] [pool-1-thread-6] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-04-15 12:11:55,094] [pool-1-thread-1] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-04-15 12:11:55,165] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-04-15 12:11:55,237] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-04-15 12:11:55,532] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-04-15 12:11:55,574] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z004.tif: [testng] [2024-04-15 12:11:55,599] [pool-1-thread-5] Initializing /data/misc/mri.avi: [testng] [2024-04-15 12:11:55,646] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-04-15 12:11:55,746] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-04-15 12:11:55,810] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-04-15 12:11:55,925] [pool-1-thread-9] Initializing /data/josiah/cell-Z1.C1.tiff: [testng] [2024-04-15 12:11:56,099] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-04-15 12:11:56,161] [pool-1-thread-3] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-04-15 12:11:56,233] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-04-15 12:11:56,287] [pool-1-thread-12] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-04-15 12:11:56,365] [pool-1-thread-8] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-04-15 12:11:56,437] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-04-15 12:11:56,610] [pool-1-thread-6] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-04-15 12:11:56,647] [pool-1-thread-9] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-04-15 12:11:56,692] [pool-1-thread-1] Initializing /data/johan/Test1_12.tif: [testng] [2024-04-15 12:11:57,012] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-04-15 12:11:57,075] [pool-1-thread-8] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-04-15 12:11:57,114] [pool-1-thread-5] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-04-15 12:11:57,139] [pool-1-thread-12] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-04-15 12:11:57,182] [pool-1-thread-2] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-04-15 12:11:57,527] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-04-15 12:11:57,691] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-04-15 12:11:57,711] [pool-1-thread-3] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-04-15 12:11:58,040] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] [2024-04-15 12:11:58,090] [pool-1-thread-5] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-04-15 12:11:58,146] [pool-1-thread-9] Initializing /data/curtis/test2.tiff: [testng] [2024-04-15 12:11:58,176] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-04-15 12:11:58,251] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-04-15 12:11:58,427] [pool-1-thread-9] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-04-15 12:11:58,839] [pool-1-thread-4] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-04-15 12:12:00,928] [pool-1-thread-12] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-04-15 12:12:00,987] [pool-1-thread-5] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-04-15 12:12:01,040] [pool-1-thread-3] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-04-15 12:12:05,287] [pool-1-thread-6] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 57 seconds Finished: SUCCESS