Started by upstream project "BIOFORMATS-test-repo" build number 300
originally caused by:
Started by upstream project "Trigger" build number 322
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins6152315003572313272.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_47413_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:25:46,093 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:25:46,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:25:46,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:46,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:46,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:25:46,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:25:46,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:25:46,096 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:46,097 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:46,097 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:25:46,097 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:25:46,097 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:25:46,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:25:46,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:25:46,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:25:46,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:25:46,370 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:25:46,371 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:25:46,371 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:25:46,371 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:25:46,371 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:25:46,372 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:25:46,372 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 275 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-27 00:25:46,382] [main] java.version = 1.8.0_342
[testng] 00:25:46,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:25:46,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:46,432 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-27_00-25-46.log]
[testng] 00:25:46,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-12-27 00:25:46,436] [main] testng.directory = /data
[testng] [2024-12-27 00:25:46,436] [main] testng.configDirectory = /config
[testng] [2024-12-27 00:25:46,448] [main] testng.multiplier = 1.0
[testng] [2024-12-27 00:25:46,448] [main] testng.in-memory = false
[testng] [2024-12-27 00:25:46,448] [main] testng.allow-missing = false
[testng] [2024-12-27 00:25:46,448] [main] user.language = en
[testng] [2024-12-27 00:25:46,448] [main] user.country = ${user.country}
[testng] [2024-12-27 00:25:46,448] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-12-27 00:25:47,002] [main] ----------------------------------------
[testng] [2024-12-27 00:25:47,003] [main] Total files: 21
[testng] [2024-12-27 00:25:47,003] [main] Scan time: 0.553 s (26 ms/file)
[testng] [2024-12-27 00:25:47,003] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-27 00:25:56,970] [pool-1-thread-1] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:25:56,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:25:56,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:56,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-27_00-25-56.log]
[testng] 00:25:56,972 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11d7f6b7 - End of configuration.
[testng] [2024-12-27 00:25:57,635] [pool-1-thread-12] Initializing /data/venu/Kontrolle0014.lim:
[testng] 00:25:57,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:25:57,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:57,636 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-27_00-25-57.log]
[testng] 00:25:57,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@448551a5 - End of configuration.
[testng] [2024-12-27 00:25:58,198] [pool-1-thread-11] Initializing /data/venu/Kontrolle0017.lim:
[testng] 00:25:58,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:25:58,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:58,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-27_00-25-58.log]
[testng] 00:25:58,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56f78f24 - End of configuration.
[testng] [2024-12-27 00:25:58,788] [pool-1-thread-10] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:25:58,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:25:58,788 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:58,789 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-27_00-25-58.log]
[testng] 00:25:58,789 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a586d6a - End of configuration.
[testng] [2024-12-27 00:25:59,340] [pool-1-thread-9] Initializing /data/venu/Kontrolle0004.lim:
[testng] 00:25:59,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:25:59,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:59,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-27_00-25-59.log]
[testng] 00:25:59,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12133707 - End of configuration.
[testng] [2024-12-27 00:25:59,901] [pool-1-thread-8] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:25:59,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:25:59,901 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:59,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-27_00-25-59.log]
[testng] 00:25:59,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77056988 - End of configuration.
[testng] [2024-12-27 00:26:00,319] [pool-1-thread-7] Initializing /data/venu/Kontrolle0007.lim:
[testng] 00:26:00,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:26:00,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:00,320 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-27_00-26-00.log]
[testng] 00:26:00,321 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ea36d8 - End of configuration.
[testng] [2024-12-27 00:26:00,588] [pool-1-thread-6] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:26:00,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:26:00,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:00,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-27_00-26-00.log]
[testng] 00:26:00,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@620644a8 - End of configuration.
[testng] [2024-12-27 00:26:00,847] [pool-1-thread-5] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:26:00,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:26:00,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:00,848 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-27_00-26-00.log]
[testng] 00:26:00,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25c92fa2 - End of configuration.
[testng] [2024-12-27 00:26:01,131] [pool-1-thread-4] Initializing /data/venu/Kontrolle0002.lim:
[testng] 00:26:01,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:26:01,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:01,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-27_00-26-01.log]
[testng] 00:26:01,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7eae0383 - End of configuration.
[testng] [2024-12-27 00:26:01,427] [pool-1-thread-3] Initializing /data/venu/Kontrolle0021.lim:
[testng] 00:26:01,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:26:01,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:01,428 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-27_00-26-01.log]
[testng] 00:26:01,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20d20114 - End of configuration.
[testng] [2024-12-27 00:26:01,691] [pool-1-thread-2] Initializing /data/venu/Kontrolle0012.lim:
[testng] 00:26:01,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:26:01,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:26:01,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-27_00-26-01.log]
[testng] 00:26:01,693 |-INFO in ch.qos.logback.core.sift.SiftProcessor@402a87d0 - End of configuration.
[testng] [2024-12-27 00:26:07,461] [pool-1-thread-6] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2024-12-27 00:26:07,721] [pool-1-thread-1] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2024-12-27 00:26:07,986] [pool-1-thread-11] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2024-12-27 00:26:08,278] [pool-1-thread-8] Initializing /data/venu/Kontrolle0019.lim:
[testng] [2024-12-27 00:26:08,548] [pool-1-thread-3] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2024-12-27 00:26:08,806] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim:
[testng] [2024-12-27 00:26:09,069] [pool-1-thread-2] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2024-12-27 00:26:09,352] [pool-1-thread-10] Initializing /data/venu/Kontrolle0018.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 29 seconds
Finished: SUCCESS