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Started by upstream project "BIOFORMATS-test-repo" build number 300
originally caused by:
 Started by upstream project "Trigger" build number 322
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins10741953794677484916.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_47425_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 00:31:45,781 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 00:31:45,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 00:31:45,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:31:45,784 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 00:31:45,784 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 00:31:45,784 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 00:31:45,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 00:31:45,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:31:45,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 00:31:45,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 00:31:45,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 00:31:45,786 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 00:31:46,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 00:31:46,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 00:31:46,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 00:31:46,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 00:31:46,053 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 00:31:46,053 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 00:31:46,053 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 00:31:46,054 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 00:31:46,054 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 00:31:46,055 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 00:31:46,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 270 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-27 00:31:46,065] [main] java.version = 1.8.0_342
   [testng] 00:31:46,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 00:31:46,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:31:46,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-27_00-31-46.log]
   [testng] 00:31:46,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-12-27 00:31:46,118] [main] testng.directory = /data
   [testng] [2024-12-27 00:31:46,118] [main] testng.configDirectory = /config
   [testng] [2024-12-27 00:31:46,131] [main] testng.multiplier = 1.0
   [testng] [2024-12-27 00:31:46,131] [main] testng.in-memory = false
   [testng] [2024-12-27 00:31:46,131] [main] testng.allow-missing = false
   [testng] [2024-12-27 00:31:46,131] [main] user.language = en
   [testng] [2024-12-27 00:31:46,131] [main] user.country = ${user.country}
   [testng] [2024-12-27 00:31:46,131] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-12-27 00:35:56,014] [main] ----------------------------------------
   [testng] [2024-12-27 00:35:56,014] [main] Total files: 226
   [testng] [2024-12-27 00:35:56,014] [main] Scan time: 249.883 s (1105 ms/file)
   [testng] [2024-12-27 00:35:56,014] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-27 00:38:12,824] [pool-1-thread-1] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] 00:38:12,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 00:38:12,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:12,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-27_00-38-12.log]
   [testng] 00:38:12,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@586594d9 - End of configuration.
   [testng] [2024-12-27 00:38:12,881] [pool-1-thread-12] Initializing /data/iplab/Color Histology.IPL: 
   [testng] 00:38:12,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 00:38:12,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:12,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-27_00-38-12.log]
   [testng] 00:38:12,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d7b7717 - End of configuration.
   [testng] [2024-12-27 00:38:12,926] [pool-1-thread-11] Initializing /data/iplab/Color Image.IPL: 
   [testng] 00:38:12,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 00:38:12,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:12,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-27_00-38-12.log]
   [testng] 00:38:12,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61f711e8 - End of configuration.
   [testng] [2024-12-27 00:38:12,973] [pool-1-thread-10] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 00:38:12,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 00:38:12,973 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:12,974 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-27_00-38-12.log]
   [testng] 00:38:12,974 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c7c0cf7 - End of configuration.
   [testng] [2024-12-27 00:38:13,248] [pool-1-thread-9] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] 00:38:13,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 00:38:13,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:13,248 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-27_00-38-13.log]
   [testng] 00:38:13,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f5c18e7 - End of configuration.
   [testng] [2024-12-27 00:38:13,521] [pool-1-thread-8] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] 00:38:13,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 00:38:13,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:13,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-27_00-38-13.log]
   [testng] 00:38:13,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78ad00a4 - End of configuration.
   [testng] [2024-12-27 00:38:13,613] [pool-1-thread-7] Initializing /data/iplab/Actin.IPL: 
   [testng] 00:38:13,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 00:38:13,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:13,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-27_00-38-13.log]
   [testng] 00:38:13,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@704545cd - End of configuration.
   [testng] [2024-12-27 00:38:13,674] [pool-1-thread-6] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] 00:38:13,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 00:38:13,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:13,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-27_00-38-13.log]
   [testng] 00:38:13,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a2dfb04 - End of configuration.
   [testng] [2024-12-27 00:38:13,952] [pool-1-thread-5] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] 00:38:13,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 00:38:13,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:13,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-27_00-38-13.log]
   [testng] 00:38:13,954 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51ab7a0c - End of configuration.
   [testng] [2024-12-27 00:38:14,212] [pool-1-thread-4] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] 00:38:14,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 00:38:14,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:14,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-27_00-38-14.log]
   [testng] 00:38:14,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a1e4d8b - End of configuration.
   [testng] [2024-12-27 00:38:14,300] [pool-1-thread-3] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] 00:38:14,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 00:38:14,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:14,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-27_00-38-14.log]
   [testng] 00:38:14,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f12c07e - End of configuration.
   [testng] [2024-12-27 00:38:14,648] [pool-1-thread-2] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] 00:38:14,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 00:38:14,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 00:38:14,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-27_00-38-14.log]
   [testng] 00:38:14,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56a991ff - End of configuration.
   [testng] [2024-12-27 00:38:17,007] [pool-1-thread-7] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] [2024-12-27 00:38:17,893] [pool-1-thread-12] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] [2024-12-27 00:38:18,017] [pool-1-thread-2] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] [2024-12-27 00:38:19,019] [pool-1-thread-11] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] [2024-12-27 00:38:19,883] [pool-1-thread-1] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] [2024-12-27 00:38:19,945] [pool-1-thread-4] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] [2024-12-27 00:38:20,219] [pool-1-thread-8] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] [2024-12-27 00:38:21,584] [pool-1-thread-12] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] [2024-12-27 00:38:21,740] [pool-1-thread-8] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] [2024-12-27 00:38:22,580] [pool-1-thread-1] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] [2024-12-27 00:38:23,786] [pool-1-thread-6] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] [2024-12-27 00:38:23,961] [pool-1-thread-5] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] [2024-12-27 00:38:24,124] [pool-1-thread-10] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2024-12-27 00:38:24,344] [pool-1-thread-9] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] [2024-12-27 00:38:25,223] [pool-1-thread-3] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] [2024-12-27 00:38:26,577] [pool-1-thread-12] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 6 minutes 51 seconds
Finished: SUCCESS