![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 300 originally caused by: Started by upstream project "Trigger" build number 322 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15450778124175810895.sh + '[' pict = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47449_merge_ci -v /uod/idr/repos/curated/pict:/data -v /uod/idr-scratch/merge-ci/curated/pict:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:56:18,036 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:56:18,038 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 00:56:18,038 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:56:18,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:56:18,039 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:56:18,039 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:56:18,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:56:18,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:56:18,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:56:18,040 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:56:18,041 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:56:18,041 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:56:18,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:56:18,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:56:18,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:56:18,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:56:18,300 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:56:18,301 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:56:18,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:56:18,301 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:56:18,301 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 00:56:18,302 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 00:56:18,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 262 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-27 00:56:18,312] [main] java.version = 1.8.0_342 [testng] 00:56:18,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:56:18,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:18,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-27_00-56-18.log] [testng] 00:56:18,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-12-27 00:56:18,365] [main] testng.directory = /data [testng] [2024-12-27 00:56:18,365] [main] testng.configDirectory = /config [testng] [2024-12-27 00:56:18,377] [main] testng.multiplier = 1.0 [testng] [2024-12-27 00:56:18,377] [main] testng.in-memory = false [testng] [2024-12-27 00:56:18,377] [main] testng.allow-missing = false [testng] [2024-12-27 00:56:18,377] [main] user.language = en [testng] [2024-12-27 00:56:18,377] [main] user.country = ${user.country} [testng] [2024-12-27 00:56:18,377] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-12-27 00:56:18,992] [main] ---------------------------------------- [testng] [2024-12-27 00:56:18,993] [main] Total files: 25 [testng] [2024-12-27 00:56:18,993] [main] Scan time: 0.615 s (24 ms/file) [testng] [2024-12-27 00:56:18,993] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 25 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-27 00:56:22,439] [pool-1-thread-1] Initializing /data/jqd/mireSixteen.pict: [testng] 00:56:22,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:56:22,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-27_00-56-22.log] [testng] 00:56:22,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20e23072 - End of configuration. [testng] [2024-12-27 00:56:22,558] [pool-1-thread-12] Initializing /data/brian/images/MARBLES_RGB.pct: [testng] 00:56:22,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:56:22,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-27_00-56-22.log] [testng] 00:56:22,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33aa113c - End of configuration. [testng] [2024-12-27 00:56:22,672] [pool-1-thread-11] Initializing /data/brian/images/FLAG_B32.pct: [testng] 00:56:22,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:56:22,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,673 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-27_00-56-22.log] [testng] 00:56:22,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@462bf57d - End of configuration. [testng] [2024-12-27 00:56:22,775] [pool-1-thread-10] Initializing /data/brian/images/WHT.PCT: [testng] 00:56:22,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:56:22,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-27_00-56-22.log] [testng] 00:56:22,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67687d2e - End of configuration. [testng] [2024-12-27 00:56:22,881] [pool-1-thread-9] Initializing /data/brian/images/GRN.PCT: [testng] 00:56:22,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:56:22,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-27_00-56-22.log] [testng] 00:56:22,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b790134 - End of configuration. [testng] [2024-12-27 00:56:22,975] [pool-1-thread-8] Initializing /data/brian/images/FLAG_B32_COMPRESSED.pct: [testng] 00:56:22,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:56:22,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:22,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-27_00-56-22.log] [testng] 00:56:22,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@adf987f - End of configuration. [testng] [2024-12-27 00:56:23,053] [pool-1-thread-7] Initializing /data/misc/planet.png: [testng] 00:56:23,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:56:23,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-27_00-56-23.log] [testng] 00:56:23,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a1bfe1c - End of configuration. [testng] [2024-12-27 00:56:23,065] [pool-1-thread-6] Initializing /data/jqd/sixteenBit.pict: [testng] 00:56:23,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:56:23,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,065 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-27_00-56-23.log] [testng] 00:56:23,066 |-INFO in ch.qos.logback.core.sift.SiftProcessor@360cea15 - End of configuration. [testng] [2024-12-27 00:56:23,148] [pool-1-thread-5] Initializing /data/brian/images/FLAG_RGB.pct: [testng] 00:56:23,148 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:56:23,148 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,149 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-27_00-56-23.log] [testng] 00:56:23,149 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d5f67ba - End of configuration. [testng] [2024-12-27 00:56:23,232] [pool-1-thread-4] Initializing /data/brian/images/RED.PCT: [testng] 00:56:23,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:56:23,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-27_00-56-23.log] [testng] 00:56:23,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1136815e - End of configuration. [testng] [2024-12-27 00:56:23,340] [pool-1-thread-3] Initializing /data/brian/images/FLAG_B24.PCT: [testng] 00:56:23,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:56:23,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-27_00-56-23.log] [testng] 00:56:23,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d144697 - End of configuration. [testng] [2024-12-27 00:56:23,446] [pool-1-thread-2] Initializing /data/wayne/PotatoMeristem.pict: [testng] 00:56:23,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:56:23,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:56:23,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-27_00-56-23.log] [testng] 00:56:23,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@553c8196 - End of configuration. [testng] [2024-12-27 00:56:25,413] [pool-1-thread-7] Initializing /data/brian/images/MARBLES_B32.pct: [testng] [2024-12-27 00:56:26,713] [pool-1-thread-8] Initializing /data/brian/images/BLK.PCT: [testng] [2024-12-27 00:56:26,821] [pool-1-thread-1] Initializing /data/brian/images/MARBLES_B24.PCT: [testng] [2024-12-27 00:56:27,004] [pool-1-thread-5] Initializing /data/brian/images/YEL.PCT: [testng] [2024-12-27 00:56:27,109] [pool-1-thread-6] Initializing /data/misc/planet.pict: [testng] [2024-12-27 00:56:27,213] [pool-1-thread-11] Initializing /data/brian/images/VENUS.pct: [testng] [2024-12-27 00:56:27,300] [pool-1-thread-3] Initializing /data/misc/planet2.pict: [testng] [2024-12-27 00:56:27,391] [pool-1-thread-4] Initializing /data/jqd/32bit.pict: [testng] [2024-12-27 00:56:27,482] [pool-1-thread-9] Initializing /data/misc/swlogo.pict: [testng] [2024-12-27 00:56:27,584] [pool-1-thread-10] Initializing /data/jqd/mire32.pict: [testng] [2024-12-27 00:56:27,740] [pool-1-thread-12] Initializing /data/brian/images/MARBLES_B32_COMPRESSED.pct: [testng] [2024-12-27 00:56:28,086] [pool-1-thread-2] Initializing /data/brian/images/BLU.PCT: [testng] [2024-12-27 00:56:29,824] [pool-1-thread-9] Initializing /data/brian/images/TRU256.PCT: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1325, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 15 seconds Finished: SUCCESS