Started by upstream project "BIOFORMATS-test-repo" build number 303
originally caused by:
Started by upstream project "Trigger" build number 325
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins6092294614614368185.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_47982_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:22:36,858 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:22:36,860 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 02:22:36,860 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:22:36,861 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:22:36,861 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:22:36,861 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:22:36,861 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:22:36,861 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:22:36,862 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:22:36,862 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:22:36,862 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:22:36,862 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:22:37,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:22:37,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:22:37,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:22:37,116 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:22:37,129 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:22:37,129 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:22:37,129 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:22:37,130 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:22:37,130 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 02:22:37,132 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 02:22:37,132 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 270 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-12-30 02:22:37,146] [main] java.version = 1.8.0_342
[testng] 02:22:37,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:22:37,152 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:22:37,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-30_02-22-37.log]
[testng] 02:22:37,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2024-12-30 02:22:37,202] [main] testng.directory = /data
[testng] [2024-12-30 02:22:37,202] [main] testng.configDirectory = /config
[testng] [2024-12-30 02:22:37,214] [main] testng.multiplier = 1.0
[testng] [2024-12-30 02:22:37,215] [main] testng.in-memory = false
[testng] [2024-12-30 02:22:37,215] [main] testng.allow-missing = false
[testng] [2024-12-30 02:22:37,215] [main] user.language = fr
[testng] [2024-12-30 02:22:37,215] [main] user.country = FR
[testng] [2024-12-30 02:22:37,215] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-12-30 02:25:21,926] [main] ----------------------------------------
[testng] [2024-12-30 02:25:21,926] [main] Total files: 268
[testng] [2024-12-30 02:25:21,926] [main] Scan time: 164.711 s (614 ms/file)
[testng] [2024-12-30 02:25:21,926] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-12-30 02:29:48,721] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] 02:29:48,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:29:48,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:48,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-30_02-29-48.log]
[testng] 02:29:48,724 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49d6a034 - End of configuration.
[testng] [2024-12-30 02:29:48,988] [pool-1-thread-12] Initializing /data/steve/TIFF/HAFF SEM:
[testng] 02:29:48,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:29:48,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:48,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-30_02-29-48.log]
[testng] 02:29:48,990 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fe0ed3c - End of configuration.
[testng] [2024-12-30 02:29:50,150] [pool-1-thread-11] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] 02:29:50,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:29:50,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:50,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-30_02-29-50.log]
[testng] 02:29:50,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50cb7332 - End of configuration.
[testng] [2024-12-30 02:29:51,254] [pool-1-thread-10] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] 02:29:51,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:29:51,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:51,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-30_02-29-51.log]
[testng] 02:29:51,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1411a712 - End of configuration.
[testng] [2024-12-30 02:29:52,561] [pool-1-thread-9] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] 02:29:52,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:29:52,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:52,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-30_02-29-52.log]
[testng] 02:29:52,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8ac62ad - End of configuration.
[testng] [2024-12-30 02:29:53,114] [pool-1-thread-8] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] 02:29:53,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:29:53,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:53,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-30_02-29-53.log]
[testng] 02:29:53,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d2316cd - End of configuration.
[testng] [2024-12-30 02:29:54,669] [pool-1-thread-7] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] 02:29:54,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:29:54,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:54,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-30_02-29-54.log]
[testng] 02:29:54,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c3dccb - End of configuration.
[testng] [2024-12-30 02:29:55,198] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] 02:29:55,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:29:55,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:55,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-30_02-29-55.log]
[testng] 02:29:55,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fbc1ecc - End of configuration.
[testng] [2024-12-30 02:29:55,403] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] 02:29:55,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:29:55,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:55,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-30_02-29-55.log]
[testng] 02:29:55,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@103a2b4d - End of configuration.
[testng] [2024-12-30 02:29:55,742] [pool-1-thread-4] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] 02:29:55,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:29:55,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:55,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-30_02-29-55.log]
[testng] 02:29:55,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41ad04e2 - End of configuration.
[testng] [2024-12-30 02:29:57,418] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] 02:29:57,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:29:57,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:57,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-30_02-29-57.log]
[testng] 02:29:57,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@93c20f2 - End of configuration.
[testng] [2024-12-30 02:29:57,728] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] 02:29:57,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:29:57,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:57,729 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-30_02-29-57.log]
[testng] 02:29:57,729 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a0cfc14 - End of configuration.
[testng] [2024-12-30 02:30:03,094] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2024-12-30 02:30:03,683] [pool-1-thread-1] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] [2024-12-30 02:30:05,452] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2024-12-30 02:30:06,261] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2024-12-30 02:30:06,860] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2024-12-30 02:30:07,412] [pool-1-thread-7] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2024-12-30 02:30:10,789] [pool-1-thread-6] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2024-12-30 02:30:13,991] [pool-1-thread-5] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2024-12-30 02:30:15,313] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2024-12-30 02:30:15,495] [pool-1-thread-2] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2024-12-30 02:30:15,909] [pool-1-thread-10] Initializing /data/steve/FITS/M13.fits:
[testng] [2024-12-30 02:30:16,063] [pool-1-thread-11] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2024-12-30 02:30:16,874] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2024-12-30 02:30:17,476] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2024-12-30 02:30:18,310] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2024-12-30 02:30:19,810] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2024-12-30 02:30:21,301] [pool-1-thread-8] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2024-12-30 02:30:25,300] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2024-12-30 02:30:26,810] [pool-1-thread-3] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2024-12-30 02:30:28,189] [pool-1-thread-2] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2024-12-30 02:30:30,084] [pool-1-thread-4] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2024-12-30 02:30:31,617] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2024-12-30 02:30:33,569] [pool-1-thread-7] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2024-12-30 02:30:35,258] [pool-1-thread-6] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2024-12-30 02:30:37,221] [pool-1-thread-3] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2024-12-30 02:30:37,749] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2024-12-30 02:30:38,984] [pool-1-thread-1] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2024-12-30 02:30:39,341] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] [2024-12-30 02:30:39,670] [pool-1-thread-9] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2024-12-30 02:30:41,024] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2024-12-30 02:30:42,495] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2024-12-30 02:30:43,263] [pool-1-thread-10] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2024-12-30 02:30:44,843] [pool-1-thread-3] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2024-12-30 02:30:46,527] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2024-12-30 02:30:47,022] [pool-1-thread-9] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2024-12-30 02:30:49,292] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2024-12-30 02:30:50,041] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] [2024-12-30 02:30:50,894] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2024-12-30 02:30:52,894] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2024-12-30 02:30:53,500] [pool-1-thread-6] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2024-12-30 02:30:54,358] [pool-1-thread-4] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2024-12-30 02:30:55,115] [pool-1-thread-7] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2024-12-30 02:30:55,666] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2024-12-30 02:30:57,200] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2024-12-30 02:30:59,190] [pool-1-thread-12] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2024-12-30 02:31:00,584] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2024-12-30 02:31:02,066] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2024-12-30 02:31:02,369] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2024-12-30 02:31:02,990] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2024-12-30 02:31:04,191] [pool-1-thread-6] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2024-12-30 02:31:04,704] [pool-1-thread-5] Initializing /data/steve/FITS/M104.fits:
[testng] [2024-12-30 02:31:04,862] [pool-1-thread-3] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2024-12-30 02:31:07,801] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2024-12-30 02:31:08,581] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2024-12-30 02:31:09,516] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2024-12-30 02:31:10,938] [pool-1-thread-8] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2024-12-30 02:31:12,268] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] [2024-12-30 02:31:15,062] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2024-12-30 02:31:17,165] [pool-1-thread-4] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] [2024-12-30 02:31:17,748] [pool-1-thread-11] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] [2024-12-30 02:31:19,064] [pool-1-thread-9] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2024-12-30 02:31:20,262] [pool-1-thread-12] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2024-12-30 02:31:20,746] [pool-1-thread-1] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng] [2024-12-30 02:31:21,121] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2024-12-30 02:31:21,475] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2024-12-30 02:31:22,672] [pool-1-thread-3] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2024-12-30 02:31:24,868] [pool-1-thread-5] Initializing /data/steve/FITS/M51.fits:
[testng] [2024-12-30 02:31:25,041] [pool-1-thread-8] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2024-12-30 02:31:26,076] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] [2024-12-30 02:31:26,590] [pool-1-thread-7] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2024-12-30 02:31:27,811] [pool-1-thread-5] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2024-12-30 02:31:29,088] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2024-12-30 02:31:30,620] [pool-1-thread-10] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2024-12-30 02:31:31,221] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2024-12-30 02:31:31,611] [pool-1-thread-6] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2024-12-30 02:31:32,750] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] [2024-12-30 02:31:33,114] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2024-12-30 02:31:33,453] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2024-12-30 02:31:35,199] [pool-1-thread-4] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2024-12-30 02:31:36,074] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2024-12-30 02:31:37,614] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2024-12-30 02:31:38,309] [pool-1-thread-1] Initializing /data/steve/Targa/Test.TGA:
[testng] [2024-12-30 02:31:38,687] [pool-1-thread-3] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2024-12-30 02:31:39,506] [pool-1-thread-7] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2024-12-30 02:31:40,909] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2024-12-30 02:31:41,642] [pool-1-thread-5] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2024-12-30 02:31:43,060] [pool-1-thread-2] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] [2024-12-30 02:31:43,760] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2024-12-30 02:31:44,313] [pool-1-thread-9] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2024-12-30 02:31:46,683] [pool-1-thread-4] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2024-12-30 02:31:49,129] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2024-12-30 02:31:50,404] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2024-12-30 02:31:50,970] [pool-1-thread-6] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2024-12-30 02:31:51,526] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2024-12-30 02:31:52,427] [pool-1-thread-2] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2024-12-30 02:31:53,528] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2024-12-30 02:31:54,243] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2024-12-30 02:31:54,583] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2024-12-30 02:31:55,068] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2024-12-30 02:31:56,187] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] [2024-12-30 02:31:56,827] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2024-12-30 02:31:57,978] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2024-12-30 02:32:00,041] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2024-12-30 02:32:00,569] [pool-1-thread-1] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2024-12-30 02:32:01,435] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2024-12-30 02:32:02,185] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2024-12-30 02:32:03,635] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2024-12-30 02:32:04,389] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] [2024-12-30 02:32:05,260] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2024-12-30 02:32:06,059] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] [2024-12-30 02:32:08,115] [pool-1-thread-7] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] [2024-12-30 02:32:09,509] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2024-12-30 02:32:09,659] [pool-1-thread-6] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2024-12-30 02:32:12,579] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2024-12-30 02:32:13,690] [pool-1-thread-10] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2024-12-30 02:32:16,255] [pool-1-thread-1] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2024-12-30 02:32:16,757] [pool-1-thread-2] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2024-12-30 02:32:18,175] [pool-1-thread-4] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2024-12-30 02:32:21,590] [pool-1-thread-5] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2024-12-30 02:32:22,251] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] [2024-12-30 02:32:24,337] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2024-12-30 02:32:24,826] [pool-1-thread-3] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2024-12-30 02:32:25,585] [pool-1-thread-9] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2024-12-30 02:32:26,654] [pool-1-thread-7] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2024-12-30 02:32:27,056] [pool-1-thread-1] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2024-12-30 02:32:27,374] [pool-1-thread-2] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2024-12-30 02:32:27,990] [pool-1-thread-5] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2024-12-30 02:32:28,374] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2024-12-30 02:32:28,744] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2024-12-30 02:32:29,920] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2024-12-30 02:32:33,356] [pool-1-thread-8] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2024-12-30 02:32:34,824] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2024-12-30 02:32:36,689] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2024-12-30 02:32:37,270] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2024-12-30 02:32:37,750] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2024-12-30 02:32:37,925] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2024-12-30 02:32:38,953] [pool-1-thread-11] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2024-12-30 02:32:40,668] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2024-12-30 02:32:42,149] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2024-12-30 02:32:43,711] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2024-12-30 02:32:45,036] [pool-1-thread-2] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2024-12-30 02:32:46,928] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2024-12-30 02:32:47,240] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2024-12-30 02:32:47,934] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] [2024-12-30 02:32:48,313] [pool-1-thread-10] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2024-12-30 02:32:49,125] [pool-1-thread-9] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2024-12-30 02:32:49,749] [pool-1-thread-8] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2024-12-30 02:32:50,459] [pool-1-thread-1] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 10 minutes 27 seconds
Finished: SUCCESS