Started by upstream project "BIOFORMATS-test-repo" build number 35
originally caused by:
 Started by upstream project "Trigger" build number 39
 originally caused by:
  Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins3052893579754768909.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_4809_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 12:37:55,809 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 12:37:55,811 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 12:37:55,811 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:37:55,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:37:55,813 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 12:37:55,813 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 12:37:55,814 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 12:37:55,814 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:37:55,814 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:37:55,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 12:37:55,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 12:37:55,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 12:37:56,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 12:37:56,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 12:37:56,169 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 12:37:56,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 12:37:56,206 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 12:37:56,206 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 12:37:56,207 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 12:37:56,207 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 12:37:56,207 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 12:37:56,208 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 12:37:56,208 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 394 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-15 12:37:56,218] [main] java.version = 1.8.0_342
   [testng] 12:37:56,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 12:37:56,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:37:56,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-15_12-37-56.log]
   [testng] 12:37:56,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-04-15 12:37:56,291] [main] testng.directory = /data
   [testng] [2024-04-15 12:37:56,291] [main] testng.configDirectory = /config
   [testng] [2024-04-15 12:37:56,306] [main] testng.multiplier = 1.0
   [testng] [2024-04-15 12:37:56,306] [main] testng.in-memory = false
   [testng] [2024-04-15 12:37:56,307] [main] testng.allow-missing = false
   [testng] [2024-04-15 12:37:56,307] [main] user.language = fr
   [testng] [2024-04-15 12:37:56,307] [main] user.country = FR
   [testng] [2024-04-15 12:37:56,307] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-04-15 12:37:57,391] [main] ----------------------------------------
   [testng] [2024-04-15 12:37:57,391] [main] Total files: 16
   [testng] [2024-04-15 12:37:57,392] [main] Scan time: 1.084 s (67 ms/file)
   [testng] [2024-04-15 12:37:57,392] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-15 12:38:09,687] [pool-1-thread-1] Initializing /data/samples/5400.afi: 
   [testng] 12:38:09,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 12:38:09,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:09,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-15_12-38-09.log]
   [testng] 12:38:09,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@794bf655 - End of configuration.
   [testng] [2024-04-15 12:38:09,872] [pool-1-thread-12] Initializing /data/samples/5351.afi: 
   [testng] 12:38:09,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 12:38:09,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:09,873 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-15_12-38-09.log]
   [testng] 12:38:09,873 |-INFO in ch.qos.logback.core.sift.SiftProcessor@131611bc - End of configuration.
   [testng] [2024-04-15 12:38:10,076] [pool-1-thread-11] Initializing /data/samples/5306.afi: 
   [testng] 12:38:10,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 12:38:10,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-15_12-38-10.log]
   [testng] 12:38:10,078 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4101a52d - End of configuration.
   [testng] [2024-04-15 12:38:10,147] [pool-1-thread-10] Initializing /data/samples/5383.afi: 
   [testng] 12:38:10,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 12:38:10,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-15_12-38-10.log]
   [testng] 12:38:10,149 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fe80a71 - End of configuration.
   [testng] [2024-04-15 12:38:10,215] [pool-1-thread-9] Initializing /data/samples/5365.afi: 
   [testng] 12:38:10,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 12:38:10,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-15_12-38-10.log]
   [testng] 12:38:10,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea4082c - End of configuration.
   [testng] [2024-04-15 12:38:10,310] [pool-1-thread-8] Initializing /data/samples/5440.afi: 
   [testng] 12:38:10,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 12:38:10,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-15_12-38-10.log]
   [testng] 12:38:10,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ada7c71 - End of configuration.
   [testng] [2024-04-15 12:38:10,548] [pool-1-thread-7] Initializing /data/samples/5446.afi: 
   [testng] 12:38:10,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 12:38:10,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,550 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-15_12-38-10.log]
   [testng] 12:38:10,551 |-INFO in ch.qos.logback.core.sift.SiftProcessor@189819b8 - End of configuration.
   [testng] [2024-04-15 12:38:10,637] [pool-1-thread-6] Initializing /data/samples/5339.afi: 
   [testng] 12:38:10,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 12:38:10,638 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,638 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-15_12-38-10.log]
   [testng] 12:38:10,639 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d7e4d8e - End of configuration.
   [testng] [2024-04-15 12:38:10,690] [pool-1-thread-5] Initializing /data/samples/5387.afi: 
   [testng] 12:38:10,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 12:38:10,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-15_12-38-10.log]
   [testng] 12:38:10,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@478c4d90 - End of configuration.
   [testng] [2024-04-15 12:38:10,790] [pool-1-thread-4] Initializing /data/samples/5407.afi: 
   [testng] 12:38:10,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 12:38:10,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-15_12-38-10.log]
   [testng] 12:38:10,792 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4761d6e8 - End of configuration.
   [testng] [2024-04-15 12:38:10,859] [pool-1-thread-3] Initializing /data/samples/5347.afi: 
   [testng] 12:38:10,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 12:38:10,860 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:10,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-15_12-38-10.log]
   [testng] 12:38:10,861 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5eeeb843 - End of configuration.
   [testng] [2024-04-15 12:38:11,043] [pool-1-thread-2] Initializing /data/samples/5358.afi: 
   [testng] 12:38:11,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 12:38:11,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:38:11,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-15_12-38-11.log]
   [testng] 12:38:11,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26141900 - End of configuration.
   [testng] [2024-04-15 12:38:54,325] [pool-1-thread-1] Initializing /data/samples/5414.afi: 
   [testng] [2024-04-15 12:38:55,774] [pool-1-thread-8] Initializing /data/samples/5343.afi: 
   [testng] [2024-04-15 12:38:56,573] [pool-1-thread-3] Initializing /data/samples/5371.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 56 seconds
Finished: SUCCESS