Started by upstream project "BIOFORMATS-test-repo" build number 306
originally caused by:
Started by upstream project "Trigger" build number 328
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins2082537258931414033.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_48399_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:36:09,091 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:36:09,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
[testng] 00:36:09,092 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:36:09,093 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:36:09,094 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:36:09,094 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:36:09,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:36:09,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:36:09,095 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:36:09,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:36:09,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:36:09,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:36:09,256 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:36:09,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:36:09,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:36:09,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:36:09,289 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:36:09,289 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:36:09,289 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:36:09,290 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:36:09,290 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
[testng] 00:36:09,291 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
[testng] 00:36:09,291 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 196 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-01-02 00:36:09,299] [main] java.version = 21
[testng] 00:36:09,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:36:09,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:36:09,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-02_00-36-09.log]
[testng] 00:36:09,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
[testng] [2025-01-02 00:36:09,348] [main] testng.directory = /data
[testng] [2025-01-02 00:36:09,348] [main] testng.configDirectory = /config
[testng] [2025-01-02 00:36:09,357] [main] testng.multiplier = 1.0
[testng] [2025-01-02 00:36:09,357] [main] testng.in-memory = false
[testng] [2025-01-02 00:36:09,357] [main] testng.allow-missing = false
[testng] [2025-01-02 00:36:09,358] [main] user.language = en
[testng] [2025-01-02 00:36:09,358] [main] user.country = ${user.country}
[testng] [2025-01-02 00:36:09,358] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-01-02 00:36:37,461] [main] ----------------------------------------
[testng] [2025-01-02 00:36:37,461] [main] Total files: 320
[testng] [2025-01-02 00:36:37,461] [main] Scan time: 28.103 s (87 ms/file)
[testng] [2025-01-02 00:36:37,462] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 196 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-01-02 00:48:11,191] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 00:48:11,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:48:11,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:11,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-02_00-48-11.log]
[testng] 00:48:11,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@187a75f2 - End of configuration.
[testng] [2025-01-02 00:48:12,092] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] 00:48:12,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:48:12,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:12,093 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-02_00-48-12.log]
[testng] 00:48:12,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e91e91a - End of configuration.
[testng] [2025-01-02 00:48:12,295] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] 00:48:12,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:48:12,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:12,296 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-02_00-48-12.log]
[testng] 00:48:12,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17eb491c - End of configuration.
[testng] [2025-01-02 00:48:12,594] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] 00:48:12,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:48:12,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:12,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-02_00-48-12.log]
[testng] 00:48:12,596 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32059388 - End of configuration.
[testng] [2025-01-02 00:48:12,870] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] 00:48:12,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:48:12,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:12,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-02_00-48-12.log]
[testng] 00:48:12,871 |-INFO in ch.qos.logback.core.sift.SiftProcessor@653a7f68 - End of configuration.
[testng] [2025-01-02 00:48:15,197] [pool-1-thread-8] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] 00:48:15,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:48:15,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:15,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-02_00-48-15.log]
[testng] 00:48:15,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50792669 - End of configuration.
[testng] [2025-01-02 00:48:15,496] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] 00:48:15,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:48:15,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:15,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-02_00-48-15.log]
[testng] 00:48:15,497 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5879f041 - End of configuration.
[testng] [2025-01-02 00:48:15,767] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] 00:48:15,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:48:15,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:15,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-02_00-48-15.log]
[testng] 00:48:15,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b586253 - End of configuration.
[testng] [2025-01-02 00:48:16,113] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] 00:48:16,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:48:16,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:16,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-02_00-48-16.log]
[testng] 00:48:16,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31f49706 - End of configuration.
[testng] [2025-01-02 00:48:16,663] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 00:48:16,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:48:16,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:16,665 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-02_00-48-16.log]
[testng] 00:48:16,665 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44308be5 - End of configuration.
[testng] [2025-01-02 00:48:17,554] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] 00:48:17,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:48:17,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:17,555 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-02_00-48-17.log]
[testng] 00:48:17,555 |-INFO in ch.qos.logback.core.sift.SiftProcessor@315951f6 - End of configuration.
[testng] [2025-01-02 00:48:18,135] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 00:48:18,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:48:18,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:18,136 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-02_00-48-18.log]
[testng] 00:48:18,136 |-INFO in ch.qos.logback.core.sift.SiftProcessor@adc44e0 - End of configuration.
[testng] [2025-01-02 00:48:23,807] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2025-01-02 00:48:24,285] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2025-01-02 00:48:24,659] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2025-01-02 00:48:24,998] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2025-01-02 00:48:25,542] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2025-01-02 00:48:25,961] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2025-01-02 00:48:26,238] [pool-1-thread-1] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2025-01-02 00:48:26,818] [pool-1-thread-7] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2025-01-02 00:48:27,750] [pool-1-thread-8] Initializing /data/olympus/XYZt.vsi:
[testng] [2025-01-02 00:48:28,009] [pool-1-thread-12] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2025-01-02 00:48:31,307] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2025-01-02 00:48:32,155] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2025-01-02 00:48:32,973] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2025-01-02 00:48:35,551] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2025-01-02 00:48:36,167] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2025-01-02 00:48:36,525] [pool-1-thread-4] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2025-01-02 00:48:59,910] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2025-01-02 00:49:00,609] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2025-01-02 00:49:01,134] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2025-01-02 00:49:02,301] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2025-01-02 00:49:05,064] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2025-01-02 00:49:06,441] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2025-01-02 00:49:11,644] [pool-1-thread-10] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2025-01-02 00:49:12,871] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2025-01-02 00:49:13,354] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2025-01-02 00:49:14,419] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2025-01-02 00:49:15,288] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2025-01-02 00:49:15,794] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2025-01-02 00:49:19,891] [pool-1-thread-10] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] [2025-01-02 00:49:20,798] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2025-01-02 00:49:21,199] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2025-01-02 00:49:23,639] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2025-01-02 00:49:24,106] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2025-01-02 00:49:28,504] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2025-01-02 00:49:29,729] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2025-01-02 00:49:30,943] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2025-01-02 00:49:31,610] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
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[testng] [2025-01-02 00:50:06,543] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2025-01-02 00:50:07,111] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2025-01-02 00:50:10,269] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2025-01-02 00:50:10,796] [pool-1-thread-10] Initializing /data/qa-17409/Clipboard.tif:
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[testng] [2025-01-02 00:50:17,244] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.vsi:
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[testng] [2025-01-02 00:50:19,786] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2025-01-02 00:50:22,831] [pool-1-thread-6] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir:
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[testng] [2025-01-02 00:50:25,861] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2025-01-02 00:50:27,305] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2025-01-02 00:50:31,861] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir:
[testng] [2025-01-02 00:50:33,893] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
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[testng] [2025-01-02 00:50:37,431] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2025-01-02 00:50:39,821] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2025-01-02 00:50:41,333] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2025-01-02 00:50:41,717] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2025-01-02 00:50:43,993] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2025-01-02 00:50:48,738] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir:
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[testng] [2025-01-02 00:50:52,531] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2025-01-02 00:50:53,214] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2025-01-02 00:50:53,665] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
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[testng] [2025-01-02 00:50:57,419] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2025-01-02 00:50:58,192] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2025-01-02 00:50:58,623] [pool-1-thread-1] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir:
[testng] [2025-01-02 00:50:58,995] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2025-01-02 00:50:59,711] [pool-1-thread-7] Initializing /data/qa-17335/1.ome.tif:
[testng] [2025-01-02 00:51:02,448] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2025-01-02 00:51:04,876] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2025-01-02 00:51:06,954] [pool-1-thread-11] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir:
[testng] [2025-01-02 00:51:07,491] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2025-01-02 00:51:09,081] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
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[testng] [2025-01-02 00:51:13,318] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2025-01-02 00:51:17,499] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2025-01-02 00:51:18,805] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2025-01-02 00:51:19,282] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2025-01-02 00:51:19,866] [pool-1-thread-10] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2025-01-02 00:51:20,735] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2025-01-02 00:51:22,291] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir:
[testng] [2025-01-02 00:51:26,432] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2025-01-02 00:51:26,991] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2025-01-02 00:51:29,377] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2025-01-02 00:51:29,845] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2025-01-02 00:51:30,513] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2025-01-02 00:51:30,966] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2025-01-02 00:51:32,765] [pool-1-thread-10] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2025-01-02 00:51:34,053] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2025-01-02 00:51:36,884] [pool-1-thread-11] Initializing /data/qa-17270/stack1.oir:
[testng] [2025-01-02 00:51:39,262] [pool-1-thread-5] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2025-01-02 00:52:33,751] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2025-01-02 00:52:34,379] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2025-01-02 00:52:36,358] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir:
[testng] [2025-01-02 00:52:37,191] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2025-01-02 00:52:38,813] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2025-01-02 00:52:42,869] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2025-01-02 00:52:44,056] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2025-01-02 00:52:47,928] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2025-01-02 00:52:51,317] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2025-01-02 00:52:53,448] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2025-01-02 00:52:56,615] [pool-1-thread-12] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2025-01-02 00:52:59,775] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2025-01-02 00:53:00,982] [pool-1-thread-1] Initializing /data/qa-17919/f10187.oir:
[testng] [2025-01-02 00:53:24,834] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2025-01-02 00:53:25,476] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2025-01-02 00:53:26,252] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
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[testng] [2025-01-02 00:53:32,209] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2025-01-02 00:53:32,849] [pool-1-thread-12] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2025-01-02 00:53:34,683] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2025-01-02 00:53:38,411] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2025-01-02 00:53:44,994] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2025-01-02 00:53:46,261] [pool-1-thread-4] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2025-01-02 00:53:47,040] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir:
[testng] [2025-01-02 00:53:48,287] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2025-01-02 00:53:54,390] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2025-01-02 00:53:58,887] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2025-01-02 00:54:00,396] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2025-01-02 00:54:05,301] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2025-01-02 00:54:07,620] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2025-01-02 00:54:08,348] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2025-01-02 00:54:11,279] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2025-01-02 00:54:14,082] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2025-01-02 00:54:16,387] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2025-01-02 00:54:17,651] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info:
[testng] [2025-01-02 00:54:27,422] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2025-01-02 00:54:31,188] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2025-01-02 00:54:32,465] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2025-01-02 00:54:33,631] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2025-01-02 00:54:37,204] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2025-01-02 00:54:41,322] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2025-01-02 00:54:41,860] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2025-01-02 00:54:44,025] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2025-01-02 00:54:45,596] [pool-1-thread-4] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2025-01-02 00:54:54,348] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2025-01-02 00:54:55,608] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2025-01-02 00:54:57,576] [pool-1-thread-7] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2025-01-02 00:55:02,331] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2025-01-02 00:55:04,688] [pool-1-thread-7] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2025-01-02 00:55:10,092] [pool-1-thread-12] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir:
[testng] [2025-01-02 00:55:20,939] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2025-01-02 00:55:24,881] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2025-01-02 00:55:26,474] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2025-01-02 00:55:31,730] [pool-1-thread-11] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2025-01-02 00:55:35,401] [pool-1-thread-12] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2025-01-02 00:55:38,234] [pool-1-thread-4] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2025-01-02 00:55:39,100] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2025-01-02 00:55:51,568] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2025-01-02 00:55:54,720] [pool-1-thread-4] Initializing /data/qa-17917/f10010.oir:
[testng] [2025-01-02 00:56:24,495] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2025-01-02 00:56:26,063] [pool-1-thread-1] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2025-01-02 00:56:26,933] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2025-01-02 00:56:27,742] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2025-01-02 00:56:34,208] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2025-01-02 00:56:35,200] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2025-01-02 00:56:35,940] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2025-01-02 00:56:39,085] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2025-01-02 00:56:41,768] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2025-01-02 00:56:43,313] [pool-1-thread-11] Initializing /data/qa-17331/Clipboard.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 10388, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 53 minutes 31 seconds
Finished: SUCCESS