Started by upstream project "BIOFORMATS-test-repo" build number 307
originally caused by:
Started by upstream project "Trigger" build number 329
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13905993393506500245.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_48568_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:25:13,134 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:25:13,135 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
[testng] 00:25:13,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:13,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:25:13,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:25:13,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:25:13,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:25:13,137 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:13,138 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:25:13,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:25:13,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:25:13,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:25:13,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:25:13,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:25:13,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:25:13,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:25:13,414 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:25:13,414 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:25:13,414 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:25:13,414 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:25:13,414 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
[testng] 00:25:13,415 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
[testng] 00:25:13,415 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 277 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-01-03 00:25:13,425] [main] java.version = 1.8.0_342
[testng] 00:25:13,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:25:13,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:13,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-03_00-25-13.log]
[testng] 00:25:13,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
[testng] [2025-01-03 00:25:13,479] [main] testng.directory = /data
[testng] [2025-01-03 00:25:13,479] [main] testng.configDirectory = /config
[testng] [2025-01-03 00:25:13,491] [main] testng.multiplier = 1.0
[testng] [2025-01-03 00:25:13,491] [main] testng.in-memory = false
[testng] [2025-01-03 00:25:13,491] [main] testng.allow-missing = false
[testng] [2025-01-03 00:25:13,491] [main] user.language = en
[testng] [2025-01-03 00:25:13,491] [main] user.country = ${user.country}
[testng] [2025-01-03 00:25:13,491] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2025-01-03 00:25:14,121] [main] ----------------------------------------
[testng] [2025-01-03 00:25:14,121] [main] Total files: 21
[testng] [2025-01-03 00:25:14,121] [main] Scan time: 0.63 s (30 ms/file)
[testng] [2025-01-03 00:25:14,121] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-01-03 00:25:21,760] [pool-1-thread-1] Initializing /data/venu/Kontrolle0001.lim:
[testng] 00:25:21,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:25:21,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:21,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-03_00-25-21.log]
[testng] 00:25:21,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21910d4c - End of configuration.
[testng] [2025-01-03 00:25:22,020] [pool-1-thread-12] Initializing /data/venu/Kontrolle0014.lim:
[testng] 00:25:22,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:25:22,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:22,022 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-03_00-25-22.log]
[testng] 00:25:22,022 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3344ee4d - End of configuration.
[testng] [2025-01-03 00:25:22,231] [pool-1-thread-11] Initializing /data/venu/Kontrolle0017.lim:
[testng] 00:25:22,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:25:22,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:22,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-03_00-25-22.log]
[testng] 00:25:22,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@330e82a4 - End of configuration.
[testng] [2025-01-03 00:25:22,459] [pool-1-thread-10] Initializing /data/venu/Kontrolle0008.lim:
[testng] 00:25:22,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:25:22,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:22,460 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-03_00-25-22.log]
[testng] 00:25:22,461 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4322e9ef - End of configuration.
[testng] [2025-01-03 00:25:22,947] [pool-1-thread-9] Initializing /data/venu/Kontrolle0004.lim:
[testng] 00:25:22,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:25:22,948 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:22,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-03_00-25-22.log]
[testng] 00:25:22,949 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e07308c - End of configuration.
[testng] [2025-01-03 00:25:23,631] [pool-1-thread-8] Initializing /data/venu/Kontrolle0016.lim:
[testng] 00:25:23,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:25:23,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:23,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-03_00-25-23.log]
[testng] 00:25:23,633 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6585d43c - End of configuration.
[testng] [2025-01-03 00:25:23,982] [pool-1-thread-7] Initializing /data/venu/Kontrolle0007.lim:
[testng] 00:25:23,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:25:23,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:23,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-03_00-25-23.log]
[testng] 00:25:23,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5249043a - End of configuration.
[testng] [2025-01-03 00:25:24,199] [pool-1-thread-6] Initializing /data/venu/Kontrolle0005.lim:
[testng] 00:25:24,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:25:24,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,200 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-03_00-25-24.log]
[testng] 00:25:24,201 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6188c4d3 - End of configuration.
[testng] [2025-01-03 00:25:24,401] [pool-1-thread-5] Initializing /data/venu/Kontrolle0003.lim:
[testng] 00:25:24,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:25:24,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-03_00-25-24.log]
[testng] 00:25:24,402 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3168b5ad - End of configuration.
[testng] [2025-01-03 00:25:24,596] [pool-1-thread-4] Initializing /data/venu/Kontrolle0002.lim:
[testng] 00:25:24,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:25:24,596 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,597 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-03_00-25-24.log]
[testng] 00:25:24,597 |-INFO in ch.qos.logback.core.sift.SiftProcessor@762b378b - End of configuration.
[testng] [2025-01-03 00:25:24,797] [pool-1-thread-3] Initializing /data/venu/Kontrolle0021.lim:
[testng] 00:25:24,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:25:24,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-03_00-25-24.log]
[testng] 00:25:24,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ea36d8 - End of configuration.
[testng] [2025-01-03 00:25:24,994] [pool-1-thread-2] Initializing /data/venu/Kontrolle0012.lim:
[testng] 00:25:24,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:25:24,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:25:24,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-03_00-25-24.log]
[testng] 00:25:24,995 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25c92fa2 - End of configuration.
[testng] [2025-01-03 00:25:29,705] [pool-1-thread-2] Initializing /data/venu/Kontrolle0020.lim:
[testng] [2025-01-03 00:25:29,909] [pool-1-thread-11] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2025-01-03 00:25:30,098] [pool-1-thread-9] Initializing /data/venu/Kontrolle0011.lim:
[testng] [2025-01-03 00:25:30,287] [pool-1-thread-3] Initializing /data/venu/Kontrolle0019.lim:
[testng] [2025-01-03 00:25:30,482] [pool-1-thread-5] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2025-01-03 00:25:30,689] [pool-1-thread-8] Initializing /data/venu/Kontrolle0009.lim:
[testng] [2025-01-03 00:25:30,883] [pool-1-thread-10] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2025-01-03 00:25:31,072] [pool-1-thread-7] Initializing /data/venu/Kontrolle0018.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 23 seconds
Finished: SUCCESS