Started by upstream project "BIOFORMATS-test-repo" build number 308
originally caused by:
Started by upstream project "Trigger" build number 330
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins3123748626123842335.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_48760_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 00:48:11,295 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:48:11,296 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
[testng] 00:48:11,296 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:48:11,297 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:48:11,298 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:48:11,298 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:48:11,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:48:11,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:48:11,299 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:48:11,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:48:11,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:48:11,300 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:48:11,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:48:11,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:48:11,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:48:11,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:48:11,510 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:48:11,510 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:48:11,510 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:48:11,511 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:48:11,511 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
[testng] 00:48:11,512 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
[testng] 00:48:11,512 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 213 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-01-04 00:48:11,521] [main] java.version = 11.0.16
[testng] 00:48:11,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:48:11,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:48:11,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-04_00-48-11.log]
[testng] 00:48:11,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2025-01-04 00:48:11,571] [main] testng.directory = /data
[testng] [2025-01-04 00:48:11,571] [main] testng.configDirectory = /config
[testng] [2025-01-04 00:48:11,581] [main] testng.multiplier = 1.0
[testng] [2025-01-04 00:48:11,582] [main] testng.in-memory = false
[testng] [2025-01-04 00:48:11,582] [main] testng.allow-missing = false
[testng] [2025-01-04 00:48:11,582] [main] user.language = en
[testng] [2025-01-04 00:48:11,582] [main] user.country = ${user.country}
[testng] [2025-01-04 00:48:11,582] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-01-04 00:48:30,381] [main] ----------------------------------------
[testng] [2025-01-04 00:48:30,381] [main] Total files: 259
[testng] [2025-01-04 00:48:30,381] [main] Scan time: 18.798 s (72 ms/file)
[testng] [2025-01-04 00:48:30,381] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-01-04 00:55:40,863] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] 00:55:40,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:55:40,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:40,866 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-04_00-55-40.log]
[testng] 00:55:40,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26866773 - End of configuration.
[testng] [2025-01-04 00:55:41,446] [pool-1-thread-12] Initializing /data/glen/singleseqline.oif:
[testng] 00:55:41,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:55:41,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:41,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-04_00-55-41.log]
[testng] 00:55:41,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3afaa2c9 - End of configuration.
[testng] [2025-01-04 00:55:42,478] [pool-1-thread-11] Initializing /data/molly/11OCT5.OIF:
[testng] 00:55:42,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:55:42,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:42,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-04_00-55-42.log]
[testng] 00:55:42,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d06f9d1 - End of configuration.
[testng] [2025-01-04 00:55:53,515] [pool-1-thread-10] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] 00:55:53,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:55:53,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:53,515 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-04_00-55-53.log]
[testng] 00:55:53,516 |-INFO in ch.qos.logback.core.sift.SiftProcessor@709c66fd - End of configuration.
[testng] [2025-01-04 00:55:55,575] [pool-1-thread-9] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] 00:55:55,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:55:55,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:55,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-04_00-55-55.log]
[testng] 00:55:55,576 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6953eb0c - End of configuration.
[testng] [2025-01-04 00:55:55,709] [pool-1-thread-8] Initializing /data/johannes/step2.bmp:
[testng] 00:55:55,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:55:55,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:55,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-04_00-55-55.log]
[testng] 00:55:55,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f65fe36 - End of configuration.
[testng] [2025-01-04 00:55:55,821] [pool-1-thread-7] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] 00:55:55,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:55:55,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:55,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-04_00-55-55.log]
[testng] 00:55:55,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19d03014 - End of configuration.
[testng] [2025-01-04 00:55:58,697] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] 00:55:58,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:55:58,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:58,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-04_00-55-58.log]
[testng] 00:55:58,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e16f3af - End of configuration.
[testng] [2025-01-04 00:55:59,740] [pool-1-thread-5] Initializing /data/marc/V0606J.oib:
[testng] 00:55:59,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:55:59,741 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:55:59,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-04_00-55-59.log]
[testng] 00:55:59,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71e46881 - End of configuration.
[testng] [2025-01-04 00:56:01,207] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] 00:56:01,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:56:01,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:56:01,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-04_00-56-01.log]
[testng] 00:56:01,208 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bdf0671 - End of configuration.
[testng] [2025-01-04 00:56:01,797] [pool-1-thread-3] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] 00:56:01,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:56:01,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:56:01,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-04_00-56-01.log]
[testng] 00:56:01,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f173377 - End of configuration.
[testng] [2025-01-04 00:56:05,162] [pool-1-thread-2] Initializing /data/brian/FLIP.oib:
[testng] 00:56:05,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:56:05,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:56:05,163 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-04_00-56-05.log]
[testng] 00:56:05,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30ef02f - End of configuration.
[testng] [2025-01-04 00:56:09,140] [pool-1-thread-9] Initializing /data/glen/notsaturated.oib:
[testng] [2025-01-04 00:56:10,433] [pool-1-thread-8] Initializing /data/michael/CELL3.oib:
[testng] [2025-01-04 00:56:12,498] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2025-01-04 00:56:13,207] [pool-1-thread-4] Initializing /data/glen/Null file/test change.oif:
[testng] [2025-01-04 00:56:14,038] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2025-01-04 00:56:15,103] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2025-01-04 00:56:19,304] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2025-01-04 00:56:19,956] [pool-1-thread-9] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2025-01-04 00:56:21,928] [pool-1-thread-1] Initializing /data/christian/20min.oif:
[testng] [2025-01-04 00:56:23,330] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib:
[testng] [2025-01-04 00:56:25,487] [pool-1-thread-8] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2025-01-04 00:56:26,174] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2025-01-04 00:56:26,847] [pool-1-thread-5] Initializing /data/qa-17748/Image0079.oib:
[testng] [2025-01-04 00:56:28,701] [pool-1-thread-7] Initializing /data/monica/Image0056.oif:
[testng] [2025-01-04 00:56:31,515] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2025-01-04 00:56:32,994] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2025-01-04 00:56:33,954] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2025-01-04 00:56:35,603] [pool-1-thread-9] Initializing /data/johannes/step1.bmp:
[testng] [2025-01-04 00:56:37,184] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2025-01-04 00:56:38,344] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2025-01-04 00:56:39,108] [pool-1-thread-5] Initializing /data/molly/11OCT4.OIF:
[testng] [2025-01-04 00:56:50,947] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2025-01-04 00:56:52,069] [pool-1-thread-8] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2025-01-04 00:56:55,590] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2025-01-04 00:56:56,210] [pool-1-thread-1] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2025-01-04 00:57:00,045] [pool-1-thread-4] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2025-01-04 00:57:00,627] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF:
[testng] [2025-01-04 00:57:23,152] [pool-1-thread-9] Initializing /data/marc/V0606L.oib:
[testng] [2025-01-04 00:57:26,587] [pool-1-thread-6] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2025-01-04 00:57:28,892] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2025-01-04 00:57:29,620] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF:
[testng] [2025-01-04 00:57:46,729] [pool-1-thread-4] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2025-01-04 00:57:48,210] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2025-01-04 00:57:51,099] [pool-1-thread-8] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2025-01-04 00:58:02,369] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib:
[testng] [2025-01-04 00:58:03,674] [pool-1-thread-4] Initializing /data/glen/singleseqline.oib:
[testng] [2025-01-04 00:58:06,342] [pool-1-thread-6] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2025-01-04 00:58:06,843] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2025-01-04 00:58:09,336] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oib:
[testng] [2025-01-04 00:58:10,735] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib:
[testng] [2025-01-04 00:58:11,257] [pool-1-thread-6] Initializing /data/kay/IM2pg.oib:
[testng] [2025-01-04 00:58:13,896] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2025-01-04 00:58:14,457] [pool-1-thread-9] Initializing /data/aryeh/1h.oib:
[testng] [2025-01-04 00:58:16,953] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2025-01-04 00:58:18,515] [pool-1-thread-6] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2025-01-04 00:58:21,362] [pool-1-thread-4] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2025-01-04 00:58:24,407] [pool-1-thread-3] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2025-01-04 00:58:25,067] [pool-1-thread-9] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2025-01-04 00:58:29,157] [pool-1-thread-6] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2025-01-04 00:58:30,446] [pool-1-thread-3] Initializing /data/johannes/step5b.bmp:
[testng] [2025-01-04 00:58:30,887] [pool-1-thread-9] Initializing /data/johannes/step3.bmp:
[testng] [2025-01-04 00:58:32,550] [pool-1-thread-3] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2025-01-04 00:58:33,562] [pool-1-thread-9] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2025-01-04 00:58:36,805] [pool-1-thread-6] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2025-01-04 00:58:44,253] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2025-01-04 00:58:46,405] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif:
[testng] [2025-01-04 00:59:31,724] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif:
[testng] [2025-01-04 01:00:37,934] [pool-1-thread-4] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2025-01-04 01:00:41,702] [pool-1-thread-4] Initializing /data/molly/11OCT3.OIF:
[testng] [2025-01-04 01:01:52,535] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF:
[testng] [2025-01-04 01:05:46,189] [pool-1-thread-10] Initializing /data/aryeh/control_test.oib:
[testng] [2025-01-04 01:06:10,093] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF:
[testng] [2025-01-04 01:06:48,899] [pool-1-thread-2] Initializing /data/yoshihito/XY.oib:
[testng] [2025-01-04 01:06:52,465] [pool-1-thread-2] Initializing /data/glen/simulstack.oif:
[testng] [2025-01-04 01:11:32,036] [pool-1-thread-6] Initializing /data/brian/lambda02nm.oib:
[testng] [2025-01-04 01:11:36,919] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2025-01-04 01:11:43,754] [pool-1-thread-6] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2025-01-04 01:14:01,708] [pool-1-thread-11] Initializing /data/johannes/step4.bmp:
[testng] [2025-01-04 01:14:07,258] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2025-01-04 01:14:13,048] [pool-1-thread-11] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2025-01-04 01:14:38,836] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2025-01-04 01:14:51,337] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2025-01-04 01:15:00,946] [pool-1-thread-5] Initializing /data/brian/Kaede15.oib:
[testng] [2025-01-04 01:15:11,113] [pool-1-thread-5] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2025-01-04 01:17:02,159] [pool-1-thread-5] Initializing /data/jae/Image0001.oib:
[testng] [2025-01-04 01:17:12,097] [pool-1-thread-5] Initializing /data/chris/missegragation-15.oib:
[testng] [2025-01-04 01:17:22,011] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF:
[testng] [2025-01-04 01:19:20,692] [pool-1-thread-1] Initializing /data/david/Image0016.oif:
[testng] [2025-01-04 01:20:40,171] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2025-01-04 01:20:49,872] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2025-01-04 01:21:03,162] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2025-01-04 01:21:11,252] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2025-01-04 01:21:17,620] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2025-01-04 01:21:20,022] [pool-1-thread-11] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2025-01-04 01:21:31,362] [pool-1-thread-1] Initializing /data/pedro/plv-test.oib:
[testng] [2025-01-04 01:21:38,171] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2025-01-04 01:21:47,228] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp:
[testng] [2025-01-04 01:21:51,965] [pool-1-thread-1] Initializing /data/tom/RGB-1.avi:
[testng] [2025-01-04 01:21:55,543] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2025-01-04 01:23:15,211] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2025-01-04 01:23:18,173] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2025-01-04 01:23:22,424] [pool-1-thread-3] Initializing /data/david/Image0016.oib:
[testng] [2025-01-04 01:23:28,492] [pool-1-thread-6] Initializing /data/tom/zseries-test.oib:
[testng] [2025-01-04 01:23:29,553] [pool-1-thread-2] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2025-01-04 01:24:21,057] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2025-01-04 01:24:29,635] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2025-01-04 01:24:31,007] [pool-1-thread-3] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2025-01-04 01:24:35,187] [pool-1-thread-11] Initializing /data/glen/notsaturated.oif:
[testng] [2025-01-04 01:24:41,635] [pool-1-thread-6] Initializing /data/yasunori/series_1.oib:
[testng] [2025-01-04 01:24:48,583] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif:
[testng] [2025-01-04 01:24:55,617] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF:
[testng] [2025-01-04 01:25:25,360] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2025-01-04 01:25:29,863] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oif:
[testng] [2025-01-04 01:25:32,035] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib:
[testng] [2025-01-04 01:25:37,354] [pool-1-thread-6] Initializing /data/sten/01.oib:
[testng] [2025-01-04 01:25:43,357] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2025-01-04 01:26:20,430] [pool-1-thread-3] Initializing /data/simon/never_worked.oib:
[testng] [2025-01-04 01:26:26,632] [pool-1-thread-3] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2025-01-04 01:26:31,222] [pool-1-thread-9] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2025-01-04 01:26:33,890] [pool-1-thread-3] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2025-01-04 01:27:36,225] [pool-1-thread-9] Initializing /data/molly/11OCT9.OIF:
[testng] [2025-01-04 01:28:32,263] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2025-01-04 01:28:35,377] [pool-1-thread-7] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2025-01-04 01:29:36,918] [pool-1-thread-6] Initializing /data/allan/62909#1.oib:
[testng] [2025-01-04 01:29:39,125] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] [2025-01-04 01:30:00,408] [pool-1-thread-6] Initializing /data/glen/Image0002.oif:
[testng] [2025-01-04 01:33:45,694] [pool-1-thread-10] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2025-01-04 01:33:52,705] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2025-01-04 01:34:01,927] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif:
[testng] [2025-01-04 01:36:13,330] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib:
[testng] [2025-01-04 01:36:18,603] [pool-1-thread-11] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2025-01-04 01:37:03,884] [pool-1-thread-11] Initializing /data/glen/simulstack.oib:
[testng] [2025-01-04 01:37:10,205] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2025-01-04 01:37:15,814] [pool-1-thread-11] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2025-01-04 01:37:20,138] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2025-01-04 01:37:25,878] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2025-01-04 01:37:31,663] [pool-1-thread-11] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2025-01-04 01:37:48,957] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif:
[testng] [2025-01-04 01:38:07,523] [pool-1-thread-12] Initializing /data/karl/Image0009.oib:
[testng] [2025-01-04 01:38:11,671] [pool-1-thread-12] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2025-01-04 01:38:18,073] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2025-01-04 01:38:20,690] [pool-1-thread-11] Initializing /data/glen/111407.oif:
[testng] 02:25:37,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:25:37,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:25:37,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-04_02-25-37.log]
[testng] 02:25:37,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c46248b - End of configuration.
[testng] 02:50:57,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:50:57,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:50:57,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-04_02-50-57.log]
[testng] 02:50:57,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5705c8fb - End of configuration.
[testng] 02:56:15,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:56:15,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:56:15,622 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-04_02-56-15.log]
[testng] 02:56:15,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@326471ab - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 128 minutes 7 seconds
Finished: SUCCESS