Started by upstream project "BIOFORMATS-test-repo" build number 308
originally caused by:
Started by upstream project "Trigger" build number 330
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14702037871648139689.sh
+ '[' naf = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_48781_merge_ci -v /uod/idr/repos/curated/naf:/data -v /uod/idr-scratch/merge-ci/curated/naf:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:16:17,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:16:17,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:16:17,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:16:17,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:16:17,287 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:16:17,288 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:16:17,288 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:16:17,288 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:16:17,288 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6340e5f0 - End of configuration.
[testng] 01:16:17,289 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1c7696c6 - Registering current configuration as safe fallback point
[testng] 01:16:17,289 |-INFO in ch.qos.logback.classic.util.ContextInitializer@60099951 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 397 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-01-04 01:16:17,299] [main] java.version = 11.0.16
[testng] 01:16:17,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:16:17,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:17,686 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-04_01-16-17.log]
[testng] 01:16:17,688 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
[testng] [2025-01-04 01:16:17,705] [main] testng.directory = /data
[testng] [2025-01-04 01:16:17,706] [main] testng.configDirectory = /config
[testng] [2025-01-04 01:16:17,761] [main] testng.multiplier = 1.0
[testng] [2025-01-04 01:16:17,763] [main] testng.in-memory = false
[testng] [2025-01-04 01:16:17,763] [main] testng.allow-missing = false
[testng] [2025-01-04 01:16:17,763] [main] user.language = en
[testng] [2025-01-04 01:16:17,763] [main] user.country = ${user.country}
[testng] [2025-01-04 01:16:17,763] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-01-04 01:16:18,734] [main] ----------------------------------------
[testng] [2025-01-04 01:16:18,735] [main] Total files: 9
[testng] [2025-01-04 01:16:18,735] [main] Scan time: 0.97 s (107 ms/file)
[testng] [2025-01-04 01:16:18,735] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 9 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-01-04 01:16:35,052] [pool-1-thread-1] Initializing /data/javier/1c.NAF:
[testng] 01:16:35,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:16:35,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:35,055 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-04_01-16-35.log]
[testng] 01:16:35,056 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f4c3124 - End of configuration.
[testng] [2025-01-04 01:16:36,481] [pool-1-thread-9] Initializing /data/javier/1b.TIF:
[testng] 01:16:36,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:16:36,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:36,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-04_01-16-36.log]
[testng] 01:16:36,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71a526ed - End of configuration.
[testng] [2025-01-04 01:16:39,179] [pool-1-thread-8] Initializing /data/cesare/Mscc7.NAF:
[testng] 01:16:39,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:16:39,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:39,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-04_01-16-39.log]
[testng] 01:16:39,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@453f54fc - End of configuration.
[testng] [2025-01-04 01:16:39,878] [pool-1-thread-7] Initializing /data/javier/1d.NAF:
[testng] 01:16:39,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:16:39,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:39,879 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-04_01-16-39.log]
[testng] 01:16:39,880 |-INFO in ch.qos.logback.core.sift.SiftProcessor@569bd599 - End of configuration.
[testng] [2025-01-04 01:16:43,479] [pool-1-thread-6] Initializing /data/javier/1d.TIF:
[testng] 01:16:43,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:16:43,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:43,481 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-04_01-16-43.log]
[testng] 01:16:43,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e920845 - End of configuration.
[testng] [2025-01-04 01:16:45,730] [pool-1-thread-5] Initializing /data/javier/1b.NAF:
[testng] 01:16:45,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:16:45,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:45,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-04_01-16-45.log]
[testng] 01:16:45,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e265a72 - End of configuration.
[testng] [2025-01-04 01:16:46,316] [pool-1-thread-4] Initializing /data/javier/1a.NAF:
[testng] 01:16:46,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:16:46,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:46,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-04_01-16-46.log]
[testng] 01:16:46,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@413d4520 - End of configuration.
[testng] [2025-01-04 01:16:47,001] [pool-1-thread-3] Initializing /data/javier/1a.TIF:
[testng] 01:16:47,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:16:47,002 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:47,003 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-04_01-16-47.log]
[testng] 01:16:47,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55088175 - End of configuration.
[testng] [2025-01-04 01:16:49,313] [pool-1-thread-2] Initializing /data/javier/1c.TIF:
[testng] 01:16:49,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:16:49,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:16:49,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-04_01-16-49.log]
[testng] 01:16:49,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b2973d2 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 477, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 3 seconds
Finished: SUCCESS