Started by upstream project "BIOFORMATS-test-repo" build number 309
originally caused by:
Started by upstream project "Trigger" build number 331
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins2032585325048231217.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_48925_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:45:38,984 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:45:38,985 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
[testng] 00:45:38,985 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:45:38,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:45:38,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:45:38,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:45:38,987 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:45:38,987 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:45:38,988 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:45:38,988 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:45:38,989 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:45:38,989 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:45:39,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:45:39,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:45:39,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:45:39,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:45:39,187 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:45:39,187 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:45:39,187 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:45:39,188 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:45:39,188 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
[testng] 00:45:39,189 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
[testng] 00:45:39,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 201 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-01-05 00:45:39,198] [main] java.version = 17.0.2
[testng] 00:45:39,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:45:39,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:45:39,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-05_00-45-39.log]
[testng] 00:45:39,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
[testng] [2025-01-05 00:45:39,246] [main] testng.directory = /data
[testng] [2025-01-05 00:45:39,246] [main] testng.configDirectory = /config
[testng] [2025-01-05 00:45:39,255] [main] testng.multiplier = 1.0
[testng] [2025-01-05 00:45:39,256] [main] testng.in-memory = false
[testng] [2025-01-05 00:45:39,256] [main] testng.allow-missing = false
[testng] [2025-01-05 00:45:39,256] [main] user.language = en
[testng] [2025-01-05 00:45:39,256] [main] user.country = ${user.country}
[testng] [2025-01-05 00:45:39,256] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-01-05 00:46:01,671] [main] ----------------------------------------
[testng] [2025-01-05 00:46:01,672] [main] Total files: 259
[testng] [2025-01-05 00:46:01,672] [main] Scan time: 22.415 s (86 ms/file)
[testng] [2025-01-05 00:46:01,672] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-01-05 00:53:00,326] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] 00:53:00,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:53:00,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:00,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-01-05_00-53-00.log]
[testng] 00:53:00,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49693d81 - End of configuration.
[testng] [2025-01-05 00:53:00,815] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib:
[testng] 00:53:00,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:53:00,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:00,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-01-05_00-53-00.log]
[testng] 00:53:00,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bf4835d - End of configuration.
[testng] [2025-01-05 00:53:01,645] [pool-1-thread-11] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] 00:53:01,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:53:01,645 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:01,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-01-05_00-53-01.log]
[testng] 00:53:01,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8863891 - End of configuration.
[testng] [2025-01-05 00:53:01,777] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib:
[testng] 00:53:01,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:53:01,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:01,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-05_00-53-01.log]
[testng] 00:53:01,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b54c21 - End of configuration.
[testng] [2025-01-05 00:53:02,052] [pool-1-thread-9] Initializing /data/qa-17748/Image0098.oib:
[testng] 00:53:02,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:53:02,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:02,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-01-05_00-53-02.log]
[testng] 00:53:02,053 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ed01331 - End of configuration.
[testng] [2025-01-05 00:53:02,403] [pool-1-thread-8] Initializing /data/christian/20min.oif:
[testng] 00:53:02,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:53:02,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:02,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-01-05_00-53-02.log]
[testng] 00:53:02,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642b808a - End of configuration.
[testng] [2025-01-05 00:53:02,526] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib:
[testng] 00:53:02,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:53:02,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:02,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-01-05_00-53-02.log]
[testng] 00:53:02,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bef57b1 - End of configuration.
[testng] [2025-01-05 00:53:03,126] [pool-1-thread-6] Initializing /data/simon/never_worked.oib:
[testng] 00:53:03,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:53:03,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:03,127 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-01-05_00-53-03.log]
[testng] 00:53:03,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@85ea298 - End of configuration.
[testng] [2025-01-05 00:53:03,332] [pool-1-thread-5] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] 00:53:03,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:53:03,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:03,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-01-05_00-53-03.log]
[testng] 00:53:03,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dc9e566 - End of configuration.
[testng] [2025-01-05 00:53:03,512] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] 00:53:03,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:53:03,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:03,513 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-01-05_00-53-03.log]
[testng] 00:53:03,513 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44b7b736 - End of configuration.
[testng] [2025-01-05 00:53:06,015] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] 00:53:06,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:53:06,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:06,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-01-05_00-53-06.log]
[testng] 00:53:06,017 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d87af9c - End of configuration.
[testng] [2025-01-05 00:53:06,195] [pool-1-thread-2] Initializing /data/glen/Image0002.oif:
[testng] 00:53:06,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:53:06,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:53:06,196 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-01-05_00-53-06.log]
[testng] 00:53:06,196 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ddf9bb6 - End of configuration.
[testng] [2025-01-05 00:53:09,864] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2025-01-05 00:53:10,292] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2025-01-05 00:53:10,742] [pool-1-thread-3] Initializing /data/molly/11OCT2.OIF:
[testng] [2025-01-05 00:53:17,997] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2025-01-05 00:53:18,253] [pool-1-thread-5] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2025-01-05 00:53:18,930] [pool-1-thread-6] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2025-01-05 00:53:20,553] [pool-1-thread-1] Initializing /data/aryeh/control_test.oib:
[testng] [2025-01-05 00:53:24,603] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2025-01-05 00:53:28,667] [pool-1-thread-10] Initializing /data/johannes/step4.bmp:
[testng] [2025-01-05 00:53:29,249] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2025-01-05 00:53:30,089] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2025-01-05 00:53:34,999] [pool-1-thread-11] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2025-01-05 00:53:36,938] [pool-1-thread-8] Initializing /data/glen/notsaturated.oib:
[testng] [2025-01-05 00:53:37,774] [pool-1-thread-10] Initializing /data/glen/111407.oif:
[testng] [2025-01-05 00:53:41,334] [pool-1-thread-12] Initializing /data/glen/singlesimul.oif:
[testng] [2025-01-05 00:53:42,736] [pool-1-thread-8] Initializing /data/brian/lambda02nm.oib:
[testng] [2025-01-05 00:53:46,522] [pool-1-thread-8] Initializing /data/yoshihito/XY.oib:
[testng] [2025-01-05 00:53:49,296] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2025-01-05 00:53:52,081] [pool-1-thread-1] Initializing /data/glen/simulstack.oif:
[testng] [2025-01-05 00:53:56,003] [pool-1-thread-8] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2025-01-05 00:54:02,868] [pool-1-thread-8] Initializing /data/qa-17748/Image0079.oib:
[testng] [2025-01-05 00:54:07,479] [pool-1-thread-8] Initializing /data/molly/11OCT7.OIF:
[testng] [2025-01-05 00:54:17,912] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2025-01-05 00:54:21,400] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2025-01-05 00:54:39,334] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif:
[testng] [2025-01-05 00:54:47,220] [pool-1-thread-9] Initializing /data/molly/11OCT5.OIF:
[testng] [2025-01-05 00:55:06,136] [pool-1-thread-12] Initializing /data/simon/used_to_work.oib:
[testng] [2025-01-05 00:55:11,029] [pool-1-thread-12] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2025-01-05 00:55:19,067] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF:
[testng] [2025-01-05 01:01:03,292] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2025-01-05 01:01:11,711] [pool-1-thread-5] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2025-01-05 01:01:18,905] [pool-1-thread-5] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2025-01-05 01:01:25,620] [pool-1-thread-5] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2025-01-05 01:01:32,395] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib:
[testng] [2025-01-05 01:01:38,746] [pool-1-thread-5] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2025-01-05 01:01:48,350] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2025-01-05 01:01:55,604] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2025-01-05 01:02:01,923] [pool-1-thread-5] Initializing /data/molly/11OCT11.OIF:
[testng] [2025-01-05 01:03:48,063] [pool-1-thread-11] Initializing /data/glen/seqlinestack.oib:
[testng] [2025-01-05 01:03:54,717] [pool-1-thread-11] Initializing /data/michael/CELL3.oib:
[testng] [2025-01-05 01:03:59,296] [pool-1-thread-7] Initializing /data/molly/11OCT3.OIF:
[testng] [2025-01-05 01:05:02,331] [pool-1-thread-11] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2025-01-05 01:05:35,411] [pool-1-thread-11] Initializing /data/chris/missegragation-15.oib:
[testng] [2025-01-05 01:05:41,926] [pool-1-thread-11] Initializing /data/glen/simulstack.oib:
[testng] [2025-01-05 01:05:48,034] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2025-01-05 01:05:56,851] [pool-1-thread-11] Initializing /data/aryeh/1h.oib:
[testng] [2025-01-05 01:06:08,830] [pool-1-thread-11] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2025-01-05 01:06:42,167] [pool-1-thread-11] Initializing /data/glen/singleseqline.oib:
[testng] [2025-01-05 01:06:47,643] [pool-1-thread-11] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2025-01-05 01:07:54,443] [pool-1-thread-6] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2025-01-05 01:08:00,174] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2025-01-05 01:08:04,840] [pool-1-thread-10] Initializing /data/jae/Image0001.oib:
[testng] [2025-01-05 01:08:11,604] [pool-1-thread-10] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2025-01-05 01:08:31,254] [pool-1-thread-1] Initializing /data/johannes/step1.bmp:
[testng] [2025-01-05 01:08:33,743] [pool-1-thread-1] Initializing /data/molly/11OCT4.OIF:
[testng] [2025-01-05 01:08:49,958] [pool-1-thread-10] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2025-01-05 01:08:51,143] [pool-1-thread-10] Initializing /data/brian/FLIP.oib:
[testng] [2025-01-05 01:08:57,112] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2025-01-05 01:09:00,284] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2025-01-05 01:09:10,776] [pool-1-thread-10] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2025-01-05 01:09:16,320] [pool-1-thread-10] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2025-01-05 01:09:24,344] [pool-1-thread-10] Initializing /data/david/Image0016.oib:
[testng] [2025-01-05 01:09:28,079] [pool-1-thread-10] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2025-01-05 01:11:04,283] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2025-01-05 01:11:18,619] [pool-1-thread-6] Initializing /data/marc/V0606L.oib:
[testng] [2025-01-05 01:11:39,760] [pool-1-thread-6] Initializing /data/glen/singleseqline.oif:
[testng] [2025-01-05 01:12:46,825] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oib:
[testng] [2025-01-05 01:12:52,686] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2025-01-05 01:12:58,404] [pool-1-thread-6] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2025-01-05 01:13:31,198] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2025-01-05 01:13:40,372] [pool-1-thread-8] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2025-01-05 01:13:45,363] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2025-01-05 01:13:52,076] [pool-1-thread-8] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2025-01-05 01:13:58,757] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2025-01-05 01:14:09,213] [pool-1-thread-8] Initializing /data/glen/notsaturated.oif:
[testng] [2025-01-05 01:15:28,227] [pool-1-thread-9] Initializing /data/johannes/step3.bmp:
[testng] [2025-01-05 01:15:30,954] [pool-1-thread-9] Initializing /data/molly/11OCT6.OIF:
[testng] [2025-01-05 01:17:29,259] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2025-01-05 01:17:37,261] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib:
[testng] [2025-01-05 01:17:45,496] [pool-1-thread-6] Initializing /data/sten/01.oib:
[testng] [2025-01-05 01:17:53,792] [pool-1-thread-6] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2025-01-05 01:18:04,641] [pool-1-thread-6] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2025-01-05 01:19:35,610] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2025-01-05 01:19:45,378] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2025-01-05 01:19:54,081] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif:
[testng] [2025-01-05 01:22:52,191] [pool-1-thread-4] Initializing /data/brian/Lambda10nm.oib:
[testng] [2025-01-05 01:22:57,747] [pool-1-thread-4] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2025-01-05 01:23:04,577] [pool-1-thread-4] Initializing /data/glen/Null file/test change.oif:
[testng] [2025-01-05 01:23:42,434] [pool-1-thread-11] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2025-01-05 01:23:47,501] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2025-01-05 01:23:49,952] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2025-01-05 01:24:01,136] [pool-1-thread-11] Initializing /data/david/Image0016.oif:
[testng] [2025-01-05 01:24:46,384] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2025-01-05 01:24:52,193] [pool-1-thread-8] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2025-01-05 01:24:59,936] [pool-1-thread-8] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2025-01-05 01:25:08,873] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2025-01-05 01:25:16,697] [pool-1-thread-8] Initializing /data/karl/Image0009.oib:
[testng] [2025-01-05 01:25:24,350] [pool-1-thread-8] Initializing /data/kay/IM2pg.oib:
[testng] [2025-01-05 01:25:34,844] [pool-1-thread-8] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2025-01-05 01:25:36,766] [pool-1-thread-11] Initializing /data/tom/RGB-1.avi:
[testng] [2025-01-05 01:25:42,031] [pool-1-thread-11] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2025-01-05 01:25:45,773] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2025-01-05 01:25:52,748] [pool-1-thread-11] Initializing /data/molly/11OCT10.OIF:
[testng] [2025-01-05 01:30:17,972] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif:
[testng] [2025-01-05 01:31:32,514] [pool-1-thread-5] Initializing /data/glen/singleseqframe.oif:
[testng] [2025-01-05 01:32:27,344] [pool-1-thread-5] Initializing /data/johannes/step5b.bmp:
[testng] [2025-01-05 01:32:29,872] [pool-1-thread-5] Initializing /data/tom/zseries-test.oib:
[testng] [2025-01-05 01:32:38,072] [pool-1-thread-5] Initializing /data/monica/Image0056.oif:
[testng] [2025-01-05 01:33:29,873] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2025-01-05 01:33:31,744] [pool-1-thread-5] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2025-01-05 01:33:35,808] [pool-1-thread-1] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2025-01-05 01:33:38,570] [pool-1-thread-5] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2025-01-05 01:33:44,119] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2025-01-05 01:33:49,785] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2025-01-05 01:33:57,805] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2025-01-05 01:34:05,226] [pool-1-thread-5] Initializing /data/johannes/step2.bmp:
[testng] [2025-01-05 01:34:08,018] [pool-1-thread-5] Initializing /data/marc/V0606J.oib:
[testng] [2025-01-05 01:34:27,941] [pool-1-thread-5] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2025-01-05 01:34:33,742] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2025-01-05 01:35:25,116] [pool-1-thread-3] Initializing /data/allan/62909#1.oib:
[testng] [2025-01-05 01:35:30,391] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2025-01-05 01:35:35,312] [pool-1-thread-3] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2025-01-05 01:36:05,367] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2025-01-05 01:36:12,386] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif:
[testng] [2025-01-05 01:36:55,494] [pool-1-thread-3] Initializing /data/johannes/step4b.bmp:
[testng] [2025-01-05 01:36:58,300] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2025-01-05 01:37:04,637] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2025-01-05 01:37:13,225] [pool-1-thread-3] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2025-01-05 01:38:10,247] [pool-1-thread-5] Initializing /data/molly/11OCT8.OIF:
[testng] [2025-01-05 01:38:26,718] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2025-01-05 01:38:35,013] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2025-01-05 01:38:42,335] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] 02:48:50,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:48:50,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:48:50,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-01-05_02-48-50.log]
[testng] 02:48:50,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33aadad2 - End of configuration.
[testng] 02:54:26,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:54:26,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:26,347 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-01-05_02-54-26.log]
[testng] 02:54:26,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ac3ceda - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 128 minutes 52 seconds
Finished: SUCCESS