Started by upstream project "BIOFORMATS-test-repo" build number 356 originally caused by: Started by upstream project "Trigger" build number 382 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins2676223434706618229.sh + '[' canon = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_56687_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:44:41,117 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:44:41,119 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 00:44:41,119 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:44:41,120 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:44:41,120 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:44:41,120 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:44:41,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:44:41,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:44:41,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:44:41,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:44:41,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:44:41,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:44:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:44:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:44:41,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:44:41,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:44:41,390 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:44:41,390 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:44:41,391 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:44:41,391 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:44:41,391 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 00:44:41,392 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 00:44:41,392 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 271 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-02-24 00:44:41,402] [main] java.version = 1.8.0_342 [testng] 00:44:41,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:44:41,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:41,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-02-24_00-44-41.log] [testng] 00:44:41,467 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-02-24 00:44:41,469] [main] testng.directory = /data [testng] [2025-02-24 00:44:41,469] [main] testng.configDirectory = /config [testng] [2025-02-24 00:44:41,485] [main] testng.multiplier = 1.0 [testng] [2025-02-24 00:44:41,486] [main] testng.in-memory = false [testng] [2025-02-24 00:44:41,486] [main] testng.allow-missing = false [testng] [2025-02-24 00:44:41,486] [main] user.language = fr [testng] [2025-02-24 00:44:41,486] [main] user.country = FR [testng] [2025-02-24 00:44:41,486] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-02-24 00:44:44,834] [main] ---------------------------------------- [testng] [2025-02-24 00:44:44,834] [main] Total files: 13 [testng] [2025-02-24 00:44:44,834] [main] Scan time: 3.348 s (257 ms/file) [testng] [2025-02-24 00:44:44,834] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 13 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-02-24 00:44:50,382] [pool-1-thread-1] Initializing /data/pete/DNG-WAV.WAV: [testng] 00:44:50,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:44:50,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:50,383 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-02-24_00-44-50.log] [testng] 00:44:50,384 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13af6b46 - End of configuration. [testng] [2025-02-24 00:44:50,568] [pool-1-thread-12] Initializing /data/kinor/2013_03_08_0808.CR2: [testng] 00:44:50,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:44:50,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:50,570 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-02-24_00-44-50.log] [testng] 00:44:50,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67c523b4 - End of configuration. [testng] [2025-02-24 00:44:50,921] [pool-1-thread-11] Initializing /data/pete/DNG-CRW.CRW: [testng] 00:44:50,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:44:50,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:50,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-02-24_00-44-50.log] [testng] 00:44:50,923 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c865dac - End of configuration. [testng] [2025-02-24 00:44:51,122] [pool-1-thread-10] Initializing /data/pete/Raw-THM.THM: [testng] 00:44:51,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:44:51,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:51,123 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-02-24_00-44-51.log] [testng] 00:44:51,123 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c462d5c - End of configuration. [testng] [2025-02-24 00:44:51,808] [pool-1-thread-9] Initializing /data/pete/Raw-WAV.WAV: [testng] 00:44:51,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:44:51,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:51,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-02-24_00-44-51.log] [testng] 00:44:51,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c89280 - End of configuration. [testng] [2025-02-24 00:44:52,317] [pool-1-thread-8] Initializing /data/pete/Raw-CRW.CRW: [testng] 00:44:52,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:44:52,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:52,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-02-24_00-44-52.log] [testng] 00:44:52,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a31ed48 - End of configuration. [testng] [2025-02-24 00:44:53,232] [pool-1-thread-7] Initializing /data/pete/Learning to Fly.JPG: [testng] 00:44:53,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:44:53,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:53,233 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-02-24_00-44-53.log] [testng] 00:44:53,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ddefe57 - End of configuration. [testng] [2025-02-24 00:44:53,975] [pool-1-thread-6] Initializing /data/pete/DNG-JPG.JPG: [testng] 00:44:53,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:44:53,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:53,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-02-24_00-44-53.log] [testng] 00:44:53,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c0258bb - End of configuration. [testng] [2025-02-24 00:44:54,592] [pool-1-thread-5] Initializing /data/pete/DNG-THM.THM: [testng] 00:44:54,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:44:54,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:54,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-02-24_00-44-54.log] [testng] 00:44:54,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@247296b6 - End of configuration. [testng] [2025-02-24 00:44:54,773] [pool-1-thread-4] Initializing /data/pete/Raw-CR2.CR2: [testng] 00:44:54,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:44:54,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:54,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-02-24_00-44-54.log] [testng] 00:44:54,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@466f2514 - End of configuration. [testng] [2025-02-24 00:44:55,359] [pool-1-thread-3] Initializing /data/pete/DNG-CR2.CR2: [testng] 00:44:55,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:44:55,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:55,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-02-24_00-44-55.log] [testng] 00:44:55,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@389d2bf6 - End of configuration. [testng] [2025-02-24 00:44:55,910] [pool-1-thread-2] Initializing /data/cls/_N5Y0001.CR2: [testng] 00:44:55,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:44:55,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:44:55,911 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-02-24_00-44-55.log] [testng] 00:44:55,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36ff572f - End of configuration. [testng] [2025-02-24 00:45:05,820] [pool-1-thread-2] Initializing /data/pete/Raw-JPG.JPG: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 689, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 40 seconds Finished: SUCCESS