Started by upstream project "BIOFORMATS-test-repo" build number 41
originally caused by:
 Started by upstream project "Trigger" build number 47
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins5170620739547338071.sh
+ '[' pcx = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_5713_merge_ci -v /uod/idr/repos/curated/pcx:/data -v /uod/idr-scratch/merge-ci/curated/pcx:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:21:48,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:48,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 01:21:48,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:48,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:48,156 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:48,156 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:48,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:48,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:48,157 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:48,157 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:48,157 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:48,157 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:48,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:48,379 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:48,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:48,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:48,414 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:48,414 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:48,414 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:48,415 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:48,415 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 01:21:48,416 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 01:21:48,416 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 259 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-22 01:21:48,425] [main] java.version = 1.8.0_342
   [testng] 01:21:48,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:48,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:48,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-22_01-21-48.log]
   [testng] 01:21:48,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-04-22 01:21:48,475] [main] testng.directory = /data
   [testng] [2024-04-22 01:21:48,476] [main] testng.configDirectory = /config
   [testng] [2024-04-22 01:21:48,487] [main] testng.multiplier = 1.0
   [testng] [2024-04-22 01:21:48,487] [main] testng.in-memory = false
   [testng] [2024-04-22 01:21:48,487] [main] testng.allow-missing = false
   [testng] [2024-04-22 01:21:48,487] [main] user.language = fr
   [testng] [2024-04-22 01:21:48,487] [main] user.country = FR
   [testng] [2024-04-22 01:21:48,487] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-04-22 01:21:48,974] [main] ----------------------------------------
   [testng] [2024-04-22 01:21:48,975] [main] Total files: 36
   [testng] [2024-04-22 01:21:48,975] [main] Scan time: 0.486 s (13 ms/file)
   [testng] [2024-04-22 01:21:48,975] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 35 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-22 01:21:50,898] [pool-1-thread-1] Initializing /data/generated/mri-stack13.pcx: 
   [testng] 01:21:50,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:21:50,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-22_01-21-50.log]
   [testng] 01:21:50,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@629c9faf - End of configuration.
   [testng] [2024-04-22 01:21:50,940] [pool-1-thread-12] Initializing /data/generated/mri-stack23.pcx: 
   [testng] 01:21:50,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:21:50,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-22_01-21-50.log]
   [testng] 01:21:50,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@172613d2 - End of configuration.
   [testng] [2024-04-22 01:21:50,946] [pool-1-thread-11] Initializing /data/josh/Screenshots/leica-lif.pcx: 
   [testng] 01:21:50,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:21:50,946 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-22_01-21-50.log]
   [testng] 01:21:50,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5efa6fcf - End of configuration.
   [testng] [2024-04-22 01:21:50,955] [pool-1-thread-10] Initializing /data/generated/mri-stack17.pcx: 
   [testng] 01:21:50,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:21:50,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,956 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-22_01-21-50.log]
   [testng] 01:21:50,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b0d3d5 - End of configuration.
   [testng] [2024-04-22 01:21:50,960] [pool-1-thread-9] Initializing /data/generated/mri-stack5.pcx: 
   [testng] 01:21:50,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:21:50,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,961 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-22_01-21-50.log]
   [testng] 01:21:50,961 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2129769 - End of configuration.
   [testng] [2024-04-22 01:21:50,965] [pool-1-thread-8] Initializing /data/generated/mri-stack7.pcx: 
   [testng] 01:21:50,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:21:50,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-22_01-21-50.log]
   [testng] 01:21:50,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e1b6e4b - End of configuration.
   [testng] [2024-04-22 01:21:50,970] [pool-1-thread-7] Initializing /data/generated/mri-stack11.pcx: 
   [testng] 01:21:50,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:21:50,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-22_01-21-50.log]
   [testng] 01:21:50,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bb9dc74 - End of configuration.
   [testng] [2024-04-22 01:21:50,974] [pool-1-thread-6] Initializing /data/generated/mri-stack4.pcx: 
   [testng] 01:21:50,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:21:50,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,975 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-22_01-21-50.log]
   [testng] 01:21:50,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47a9500a - End of configuration.
   [testng] [2024-04-22 01:21:50,978] [pool-1-thread-5] Initializing /data/generated/mri-stack15.pcx: 
   [testng] 01:21:50,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:21:50,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,979 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-22_01-21-50.log]
   [testng] 01:21:50,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cfa8e5f - End of configuration.
   [testng] [2024-04-22 01:21:50,983] [pool-1-thread-4] Initializing /data/generated/mri-stack2.pcx: 
   [testng] 01:21:50,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:21:50,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-22_01-21-50.log]
   [testng] 01:21:50,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47f3d9c0 - End of configuration.
   [testng] [2024-04-22 01:21:50,988] [pool-1-thread-3] Initializing /data/generated/mri-stack18.pcx: 
   [testng] 01:21:50,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:21:50,989 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,989 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-22_01-21-50.log]
   [testng] 01:21:50,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@450a18d5 - End of configuration.
   [testng] [2024-04-22 01:21:50,993] [pool-1-thread-2] Initializing /data/generated/mri-stack8.pcx: 
   [testng] 01:21:50,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:21:50,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:50,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-22_01-21-50.log]
   [testng] 01:21:50,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a5bbb20 - End of configuration.
   [testng] [2024-04-22 01:21:53,084] [pool-1-thread-5] Initializing /data/generated/mri-stack3.pcx: 
   [testng] [2024-04-22 01:21:53,087] [pool-1-thread-8] Initializing /data/generated/mri-stack22.pcx: 
   [testng] [2024-04-22 01:21:53,090] [pool-1-thread-10] Initializing /data/generated/mri-stack20.pcx: 
   [testng] [2024-04-22 01:21:53,094] [pool-1-thread-4] Initializing /data/generated/mri-stack19.pcx: 
   [testng] [2024-04-22 01:21:53,097] [pool-1-thread-6] Initializing /data/josh/Screenshots/nd2 color.pcx: 
   [testng] [2024-04-22 01:21:53,105] [pool-1-thread-12] Initializing /data/generated/mri-stack16.pcx: 
   [testng] [2024-04-22 01:21:53,108] [pool-1-thread-9] Initializing /data/josh/Screenshots/slidebooksamezposition.pcx: 
   [testng] [2024-04-22 01:21:53,117] [pool-1-thread-1] Initializing /data/generated/mri-stack1.pcx: 
   [testng] [2024-04-22 01:21:53,121] [pool-1-thread-3] Initializing /data/generated/mri-stack24.pcx: 
   [testng] [2024-04-22 01:21:53,123] [pool-1-thread-2] Initializing /data/generated/mri-stack21.pcx: 
   [testng] [2024-04-22 01:21:53,126] [pool-1-thread-7] Initializing /data/josh/Screenshots/biorad color off.pcx: 
   [testng] [2024-04-22 01:21:53,133] [pool-1-thread-11] Initializing /data/josh/Screenshots/Metamorph image-stack.pcx: 
   [testng] [2024-04-22 01:21:53,408] [pool-1-thread-2] Initializing /data/generated/mri-stack25.pcx: 
   [testng] [2024-04-22 01:21:53,411] [pool-1-thread-3] Initializing /data/generated/mri-stack9.pcx: 
   [testng] [2024-04-22 01:21:53,438] [pool-1-thread-1] Initializing /data/generated/mri-stack26.pcx: 
   [testng] [2024-04-22 01:21:53,441] [pool-1-thread-5] Initializing /data/generated/mri-stack14.pcx: 
   [testng] [2024-04-22 01:21:53,444] [pool-1-thread-10] Initializing /data/josh/Screenshots/deltavision.pcx: 
   [testng] [2024-04-22 01:21:53,449] [pool-1-thread-12] Initializing /data/generated/mri-stack6.pcx: 
   [testng] [2024-04-22 01:21:53,472] [pool-1-thread-8] Initializing /data/generated/mri-stack12.pcx: 
   [testng] [2024-04-22 01:21:53,475] [pool-1-thread-4] Initializing /data/josh/Screenshots/epscolor.pcx: 
   [testng] [2024-04-22 01:21:53,534] [pool-1-thread-2] Initializing /data/josh/Screenshots/fv1000color.pcx: 
   [testng] [2024-04-22 01:21:53,539] [pool-1-thread-3] Initializing /data/generated/mri-stack10.pcx: 
   [testng] [2024-04-22 01:21:53,579] [pool-1-thread-12] Initializing /data/generated/mri-stack0.pcx: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1855, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 8 seconds
Finished: SUCCESS