Started by upstream project "BIOFORMATS-test-repo" build number 362
originally caused by:
Started by upstream project "Trigger" build number 388
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4569033424330923351.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_57635_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:21:36,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 00:21:36,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
[testng] 00:21:36,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:36,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:21:36,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:21:36,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:21:36,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:21:36,086 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:36,086 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:21:36,086 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:21:36,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:21:36,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:21:36,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:21:36,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:21:36,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:21:36,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:21:36,267 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:21:36,268 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:21:36,268 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:21:36,268 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:21:36,268 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
[testng] 00:21:36,269 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
[testng] 00:21:36,269 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 183 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-02 00:21:36,277] [main] java.version = 17.0.2
[testng] 00:21:36,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:21:36,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:21:36,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_00-21-36.log]
[testng] 00:21:36,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
[testng] [2025-03-02 00:21:36,322] [main] testng.directory = /data
[testng] [2025-03-02 00:21:36,323] [main] testng.configDirectory = /config
[testng] [2025-03-02 00:21:36,331] [main] testng.multiplier = 1.0
[testng] [2025-03-02 00:21:36,332] [main] testng.in-memory = false
[testng] [2025-03-02 00:21:36,332] [main] testng.allow-missing = false
[testng] [2025-03-02 00:21:36,332] [main] user.language = en
[testng] [2025-03-02 00:21:36,332] [main] user.country = ${user.country}
[testng] [2025-03-02 00:21:36,332] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-02 00:21:43,412] [main] ----------------------------------------
[testng] [2025-03-02 00:21:43,412] [main] Total files: 103
[testng] [2025-03-02 00:21:43,412] [main] Scan time: 7.079 s (68 ms/file)
[testng] [2025-03-02 00:21:43,412] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-02 00:22:02,807] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] 00:22:02,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:22:02,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:02,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-02_00-22-02.log]
[testng] 00:22:02,809 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1080a043 - End of configuration.
[testng] [2025-03-02 00:22:02,927] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] 00:22:02,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:22:02,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:02,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-02_00-22-02.log]
[testng] 00:22:02,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67253b6d - End of configuration.
[testng] [2025-03-02 00:22:03,041] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] 00:22:03,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:22:03,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:03,042 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-02_00-22-03.log]
[testng] 00:22:03,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@372fb45b - End of configuration.
[testng] [2025-03-02 00:22:04,177] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] 00:22:04,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:22:04,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:04,178 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-02_00-22-04.log]
[testng] 00:22:04,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@563f766a - End of configuration.
[testng] [2025-03-02 00:22:04,283] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] 00:22:04,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:22:04,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:04,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-02_00-22-04.log]
[testng] 00:22:04,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fc30979 - End of configuration.
[testng] [2025-03-02 00:22:04,498] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] 00:22:04,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:22:04,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:04,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-02_00-22-04.log]
[testng] 00:22:04,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1991c92e - End of configuration.
[testng] [2025-03-02 00:22:04,956] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] 00:22:04,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:22:04,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:04,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-02_00-22-04.log]
[testng] 00:22:04,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@637c9eff - End of configuration.
[testng] [2025-03-02 00:22:05,208] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] 00:22:05,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:22:05,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:05,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-02_00-22-05.log]
[testng] 00:22:05,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5305c501 - End of configuration.
[testng] [2025-03-02 00:22:06,080] [pool-1-thread-5] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] 00:22:06,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:22:06,081 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-02_00-22-06.log]
[testng] 00:22:06,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@789cbae1 - End of configuration.
[testng] [2025-03-02 00:22:06,192] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] 00:22:06,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:22:06,193 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:06,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-02_00-22-06.log]
[testng] 00:22:06,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ffcdda - End of configuration.
[testng] [2025-03-02 00:22:07,045] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] 00:22:07,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:22:07,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:07,046 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-02_00-22-07.log]
[testng] 00:22:07,047 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5858e507 - End of configuration.
[testng] [2025-03-02 00:22:07,190] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] 00:22:07,190 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:22:07,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:07,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-02_00-22-07.log]
[testng] 00:22:07,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration.
[testng] [2025-03-02 00:22:11,303] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2025-03-02 00:22:11,441] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2025-03-02 00:22:11,807] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2025-03-02 00:22:11,965] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2025-03-02 00:22:12,338] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2025-03-02 00:22:12,499] [pool-1-thread-8] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2025-03-02 00:22:13,950] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2025-03-02 00:22:15,121] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2025-03-02 00:22:15,436] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2025-03-02 00:22:15,940] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2025-03-02 00:22:16,314] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2025-03-02 00:22:17,952] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2025-03-02 00:22:18,109] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2025-03-02 00:22:19,082] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2025-03-02 00:22:19,196] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2025-03-02 00:22:19,321] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2025-03-02 00:22:19,446] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2025-03-02 00:22:20,074] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2025-03-02 00:22:21,911] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2025-03-02 00:22:22,843] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2025-03-02 00:22:23,240] [pool-1-thread-5] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2025-03-02 00:22:23,401] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2025-03-02 00:22:25,026] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3:
[testng] [2025-03-02 00:22:26,129] [pool-1-thread-8] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2025-03-02 00:22:27,077] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2025-03-02 00:22:27,243] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2025-03-02 00:22:27,388] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2025-03-02 00:22:29,043] [pool-1-thread-5] Initializing /data/jay/dnasample.tif:
[testng] [2025-03-02 00:22:29,986] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2025-03-02 00:22:30,479] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2025-03-02 00:22:30,857] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2025-03-02 00:22:31,065] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2025-03-02 00:22:32,499] [pool-1-thread-10] Initializing /data/jay/Carbon.34.dm3:
[testng] [2025-03-02 00:22:33,708] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2025-03-02 00:22:34,008] [pool-1-thread-6] Initializing /data/ofra/lowloss.dm3:
[testng] [2025-03-02 00:22:34,608] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2025-03-02 00:22:36,168] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2025-03-02 00:22:37,364] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2025-03-02 00:22:39,095] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2025-03-02 00:22:40,661] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2025-03-02 00:22:41,618] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2025-03-02 00:22:41,933] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3:
[testng] [2025-03-02 00:22:42,135] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2025-03-02 00:22:43,316] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2025-03-02 00:22:43,847] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2025-03-02 00:22:44,038] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2025-03-02 00:22:45,301] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2025-03-02 00:22:46,003] [pool-1-thread-2] Initializing /data/jay/dnasample1.dm3:
[testng] [2025-03-02 00:22:46,511] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2025-03-02 00:22:47,490] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2025-03-02 00:22:47,852] [pool-1-thread-10] Initializing /data/jay/DMtest2.dm3:
[testng] [2025-03-02 00:22:48,024] [pool-1-thread-3] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2025-03-02 00:22:48,382] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2025-03-02 00:22:48,922] [pool-1-thread-8] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2025-03-02 00:22:49,134] [pool-1-thread-4] Initializing /data/jay/DMtest.dm3:
[testng] [2025-03-02 00:22:49,322] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4:
[testng] [2025-03-02 00:22:50,242] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2025-03-02 00:22:50,671] [pool-1-thread-3] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2025-03-02 00:22:51,133] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2025-03-02 00:22:51,497] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3:
[testng] [2025-03-02 00:22:51,880] [pool-1-thread-12] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2025-03-02 00:22:52,028] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2025-03-02 00:22:52,970] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2025-03-02 00:22:53,285] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2025-03-02 00:22:53,479] [pool-1-thread-3] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2025-03-02 00:22:53,631] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2025-03-02 00:22:53,777] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2025-03-02 00:22:53,948] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2025-03-02 00:22:54,892] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2025-03-02 00:22:55,795] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2025-03-02 00:22:55,976] [pool-1-thread-4] Initializing /data/jay/smallerfile.dm3:
[testng] [2025-03-02 00:22:57,029] [pool-1-thread-9] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2025-03-02 00:22:58,506] [pool-1-thread-3] Initializing /data/melissa/annotation-test.tif:
[testng] [2025-03-02 00:22:59,857] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2025-03-02 00:23:00,824] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2025-03-02 00:23:00,967] [pool-1-thread-6] Initializing /data/qa-21761/example.dm4:
[testng] [2025-03-02 00:23:01,125] [pool-1-thread-10] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2025-03-02 00:23:01,308] [pool-1-thread-4] Initializing /data/jay/camtest1.dm3:
[testng] [2025-03-02 00:23:01,544] [pool-1-thread-1] Initializing /data/jay/graphitedm3.dm3:
[testng] [2025-03-02 00:23:01,981] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2025-03-02 00:23:04,971] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2025-03-02 00:23:05,757] [pool-1-thread-2] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2025-03-02 00:23:07,152] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2025-03-02 00:23:07,351] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2025-03-02 00:23:08,489] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2025-03-02 00:23:09,071] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 54 seconds
Finished: SUCCESS