Started by upstream project "BIOFORMATS-test-repo" build number 362
originally caused by:
 Started by upstream project "Trigger" build number 388
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins10199888767909337281.sh
+ '[' jpeg2000 = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_57789_merge_ci -v /uod/idr/repos/curated/jpeg2000:/data -v /uod/idr-scratch/merge-ci/curated/jpeg2000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 04:26:15,260 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 04:26:15,262 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 04:26:15,262 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 04:26:15,263 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 04:26:15,263 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 04:26:15,263 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 04:26:15,264 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 04:26:15,264 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 04:26:15,264 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 04:26:15,265 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 04:26:15,265 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 04:26:15,265 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 04:26:15,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 04:26:15,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 04:26:15,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 04:26:15,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 04:26:15,449 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 04:26:15,450 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 04:26:15,450 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 04:26:15,450 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 04:26:15,450 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 04:26:15,451 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 04:26:15,451 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 187 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-02 04:26:15,459] [main] java.version = 17.0.2
   [testng] 04:26:15,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 04:26:15,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:26:15,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_04-26-15.log]
   [testng] 04:26:15,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-03-02 04:26:15,505] [main] testng.directory = /data
   [testng] [2025-03-02 04:26:15,505] [main] testng.configDirectory = /config
   [testng] [2025-03-02 04:26:15,513] [main] testng.multiplier = 1.0
   [testng] [2025-03-02 04:26:15,514] [main] testng.in-memory = false
   [testng] [2025-03-02 04:26:15,514] [main] testng.allow-missing = false
   [testng] [2025-03-02 04:26:15,514] [main] user.language = en
   [testng] [2025-03-02 04:26:15,514] [main] user.country = ${user.country}
   [testng] [2025-03-02 04:26:15,515] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-03-02 04:26:36,584] [main] ----------------------------------------
   [testng] [2025-03-02 04:26:36,584] [main] Total files: 31
   [testng] [2025-03-02 04:26:36,584] [main] Scan time: 21.069 s (679 ms/file)
   [testng] [2025-03-02 04:26:36,584] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 30 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-02 04:26:59,926] [pool-1-thread-1] Initializing /data/venu/Multichannel 3a.jpg: 
   [testng] 04:26:59,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 04:26:59,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:26:59,928 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-02_04-26-59.log]
   [testng] 04:26:59,928 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54a21458 - End of configuration.
   [testng] [2025-03-02 04:27:00,080] [pool-1-thread-12] Initializing /data/venu/Multichannel 3.jp2: 
   [testng] 04:27:00,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 04:27:00,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:00,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-02_04-27-00.log]
   [testng] 04:27:00,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27b4520 - End of configuration.
   [testng] [2025-03-02 04:27:00,977] [pool-1-thread-11] Initializing /data/david/000000_000001.jpx: 
   [testng] 04:27:00,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 04:27:00,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:00,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-02_04-27-00.log]
   [testng] 04:27:00,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a614686 - End of configuration.
   [testng] [2025-03-02 04:27:01,664] [pool-1-thread-10] Initializing /data/vikram/Captured 3.jp2: 
   [testng] 04:27:01,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 04:27:01,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:01,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-02_04-27-01.log]
   [testng] 04:27:01,667 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f360f71 - End of configuration.
   [testng] [2025-03-02 04:27:02,204] [pool-1-thread-9] Initializing /data/david/C1R1_FOS.jp2: 
   [testng] 04:27:02,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 04:27:02,204 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:02,205 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-02_04-27-02.log]
   [testng] 04:27:02,205 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4762f9be - End of configuration.
   [testng] [2025-03-02 04:27:02,932] [pool-1-thread-8] Initializing /data/angel/002_L050071_32_01_09_x2.jp2: 
   [testng] 04:27:02,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 04:27:02,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:02,933 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-02_04-27-02.log]
   [testng] 04:27:02,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@499ff7e9 - End of configuration.
   [testng] [2025-03-02 04:27:03,571] [pool-1-thread-7] Initializing /data/mike/LCM-4-3-color-cleaned-LOCI.tiff: 
   [testng] 04:27:03,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 04:27:03,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:03,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-02_04-27-03.log]
   [testng] 04:27:03,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30760d38 - End of configuration.
   [testng] [2025-03-02 04:27:04,790] [pool-1-thread-6] Initializing /data/david/multichannel-3d-MBF-type.jpx: 
   [testng] 04:27:04,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 04:27:04,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:04,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-02_04-27-04.log]
   [testng] 04:27:04,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@651198ec - End of configuration.
   [testng] [2025-03-02 04:27:05,659] [pool-1-thread-5] Initializing /data/david/multichannel-2d test-non MBF-type.jp2: 
   [testng] 04:27:05,659 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 04:27:05,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:05,660 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-02_04-27-05.log]
   [testng] 04:27:05,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c02297c - End of configuration.
   [testng] [2025-03-02 04:27:06,375] [pool-1-thread-4] Initializing /data/vikram/Captured 2.jp2: 
   [testng] 04:27:06,375 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 04:27:06,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:06,376 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-02_04-27-06.log]
   [testng] 04:27:06,377 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18685293 - End of configuration.
   [testng] [2025-03-02 04:27:07,168] [pool-1-thread-3] Initializing /data/david/cy5-tph.jp2: 
   [testng] 04:27:07,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 04:27:07,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:07,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-02_04-27-07.log]
   [testng] 04:27:07,169 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6732033b - End of configuration.
   [testng] [2025-03-02 04:27:08,276] [pool-1-thread-2] Initializing /data/vikram/Captured 1.jp2: 
   [testng] 04:27:08,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 04:27:08,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:27:08,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-02_04-27-08.log]
   [testng] 04:27:08,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ec80086 - End of configuration.
   [testng] [2025-03-02 04:27:13,164] [pool-1-thread-1] Initializing /data/vikram/Captured 5.jp2: 
   [testng] [2025-03-02 04:27:14,820] [pool-1-thread-10] Initializing /data/angel/052_L050071_56_x2hv.jp2: 
   [testng] [2025-03-02 04:27:15,648] [pool-1-thread-2] Initializing /data/big-images/2kx2k.jpf: 
   [testng] [2025-03-02 04:27:16,896] [pool-1-thread-4] Initializing /data/misc/clown-rgb.jbig: 
   [testng] [2025-03-02 04:27:20,662] [pool-1-thread-7] Initializing /data/david/multichannel-2d test.jp2: 
   [testng] [2025-03-02 04:27:22,474] [pool-1-thread-1] Initializing /data/mike/LCM-4-3-color-cleaned.tiff: 
   [testng] [2025-03-02 04:27:24,373] [pool-1-thread-11] Initializing /data/frans/flower.jp2: 
   [testng] [2025-03-02 04:27:28,783] [pool-1-thread-12] Initializing /data/big-images/8kx8k.jpf: 
   [testng] [2025-03-02 04:27:29,444] [pool-1-thread-4] Initializing /data/aryeh/flour 12.jp2: 
   [testng] [2025-03-02 04:27:30,282] [pool-1-thread-8] Initializing /data/misc/clown-rgb.jpc: 
   [testng] [2025-03-02 04:27:35,015] [pool-1-thread-2] Initializing /data/misc/clown-rgb.jp2: 
   [testng] [2025-03-02 04:27:35,955] [pool-1-thread-1] Initializing /data/david/multichannel-3d-non-MBF-trial-2.jpx: 
   [testng] [2025-03-02 04:27:37,219] [pool-1-thread-8] Initializing /data/mario/b0bCDME-0007_wB05_s1_z1_t1_cGFP_u001.jp2: 
   [testng] [2025-03-02 04:27:37,833] [pool-1-thread-10] Initializing /data/kraig/head.jp2: 
   [testng] [2025-03-02 04:27:38,411] [pool-1-thread-4] Initializing /data/mike/LCM4-1-cr10-cleaned.jp2: 
   [testng] [2025-03-02 04:27:41,730] [pool-1-thread-2] Initializing /data/vikram/Captured 4.jp2: 
   [testng] [2025-03-02 04:27:44,271] [pool-1-thread-10] Initializing /data/mike/LCM-4-3-color-cleaned.jp2: 
   [testng] [2025-03-02 04:27:46,934] [pool-1-thread-2] Initializing /data/big-images/4kx4k.jpf: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1590, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 6 minutes 40 seconds
Finished: SUCCESS