Started by upstream project "BIOFORMATS-test-repo" build number 364
originally caused by:
Started by upstream project "Trigger" build number 390
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins16464398431309251859.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58005_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 00:44:19,619 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 00:44:19,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service.
[testng] 00:44:19,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:19,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:19,622 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:44:19,623 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:44:19,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:44:19,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:19,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:19,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:44:19,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:44:19,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:44:19,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:44:19,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:44:19,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:44:19,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:44:19,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:44:19,834 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:44:19,834 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:44:19,835 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:44:19,835 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration.
[testng] 00:44:19,836 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point
[testng] 00:44:19,836 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 213 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-04 00:44:19,845] [main] java.version = 11.0.16
[testng] 00:44:19,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:44:19,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:44:19,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-04_00-44-19.log]
[testng] 00:44:19,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration.
[testng] [2025-03-04 00:44:19,898] [main] testng.directory = /data
[testng] [2025-03-04 00:44:19,898] [main] testng.configDirectory = /config
[testng] [2025-03-04 00:44:19,909] [main] testng.multiplier = 1.0
[testng] [2025-03-04 00:44:19,910] [main] testng.in-memory = false
[testng] [2025-03-04 00:44:19,910] [main] testng.allow-missing = false
[testng] [2025-03-04 00:44:19,910] [main] user.language = en
[testng] [2025-03-04 00:44:19,911] [main] user.country = ${user.country}
[testng] [2025-03-04 00:44:19,911] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-04 00:44:44,969] [main] ----------------------------------------
[testng] [2025-03-04 00:44:44,969] [main] Total files: 259
[testng] [2025-03-04 00:44:44,969] [main] Scan time: 25.058 s (96 ms/file)
[testng] [2025-03-04 00:44:44,969] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-04 00:51:33,058] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] 00:51:33,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:51:33,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:33,061 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-04_00-51-33.log]
[testng] 00:51:33,061 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e7d663d - End of configuration.
[testng] [2025-03-04 00:51:33,497] [pool-1-thread-12] Initializing /data/satoshi/60x_5x_1.oif:
[testng] 00:51:33,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:51:33,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:33,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-04_00-51-33.log]
[testng] 00:51:33,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ab80b24 - End of configuration.
[testng] [2025-03-04 00:51:34,387] [pool-1-thread-11] Initializing /data/molly/11OCT5.OIF:
[testng] 00:51:34,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:51:34,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:34,388 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-04_00-51-34.log]
[testng] 00:51:34,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@adc0cbf - End of configuration.
[testng] [2025-03-04 00:51:40,462] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] 00:51:40,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:51:40,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:40,463 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-04_00-51-40.log]
[testng] 00:51:40,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32f8da07 - End of configuration.
[testng] [2025-03-04 00:51:40,936] [pool-1-thread-9] Initializing /data/michael/CELL3.oib:
[testng] 00:51:40,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:51:40,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:40,937 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-04_00-51-40.log]
[testng] 00:51:40,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c736ec3 - End of configuration.
[testng] [2025-03-04 00:51:41,233] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] 00:51:41,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:51:41,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:41,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-04_00-51-41.log]
[testng] 00:51:41,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@363b93d - End of configuration.
[testng] [2025-03-04 00:51:41,707] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] 00:51:41,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:51:41,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:41,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-04_00-51-41.log]
[testng] 00:51:41,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70ffce53 - End of configuration.
[testng] [2025-03-04 00:51:42,282] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] 00:51:42,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:51:42,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:42,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-04_00-51-42.log]
[testng] 00:51:42,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25860306 - End of configuration.
[testng] [2025-03-04 00:51:42,840] [pool-1-thread-5] Initializing /data/stefan/cytosol_08b.oif:
[testng] 00:51:42,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:51:42,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:42,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-04_00-51-42.log]
[testng] 00:51:42,841 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9e3b5b - End of configuration.
[testng] [2025-03-04 00:51:47,786] [pool-1-thread-4] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] 00:51:47,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:51:47,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:47,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-04_00-51-47.log]
[testng] 00:51:47,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@332a6078 - End of configuration.
[testng] [2025-03-04 00:51:48,474] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] 00:51:48,474 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:51:48,474 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:48,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-04_00-51-48.log]
[testng] 00:51:48,475 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ba3b94c - End of configuration.
[testng] [2025-03-04 00:51:48,977] [pool-1-thread-2] Initializing /data/christian/20min.oif:
[testng] 00:51:48,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:51:48,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:48,977 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-04_00-51-48.log]
[testng] 00:51:48,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@84d53c4 - End of configuration.
[testng] [2025-03-04 00:51:53,755] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2025-03-04 00:51:54,447] [pool-1-thread-8] Initializing /data/johannes/step1.bmp:
[testng] [2025-03-04 00:51:54,581] [pool-1-thread-1] Initializing /data/jae/Image0001.oib:
[testng] [2025-03-04 00:51:55,158] [pool-1-thread-10] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2025-03-04 00:51:55,662] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2025-03-04 00:51:56,134] [pool-1-thread-6] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2025-03-04 00:51:56,670] [pool-1-thread-7] Initializing /data/glen/singleseqline.oib:
[testng] [2025-03-04 00:51:58,444] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2025-03-04 00:52:00,664] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2025-03-04 00:52:05,012] [pool-1-thread-3] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2025-03-04 00:52:05,619] [pool-1-thread-10] Initializing /data/brian/Kaede15.oib:
[testng] [2025-03-04 00:52:06,347] [pool-1-thread-7] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] [2025-03-04 00:52:07,125] [pool-1-thread-1] Initializing /data/yoshihito/XY.oib:
[testng] [2025-03-04 00:52:07,556] [pool-1-thread-4] Initializing /data/simon/used_to_work.oib:
[testng] [2025-03-04 00:52:08,134] [pool-1-thread-9] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2025-03-04 00:52:08,597] [pool-1-thread-6] Initializing /data/yoshihito/XY.oif:
[testng] [2025-03-04 00:52:12,066] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2025-03-04 00:52:13,043] [pool-1-thread-1] Initializing /data/glen/111407.oif:
[testng] [2025-03-04 00:52:15,791] [pool-1-thread-3] Initializing /data/sten/01.oib:
[testng] [2025-03-04 00:52:16,695] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib:
[testng] [2025-03-04 00:52:17,192] [pool-1-thread-10] Initializing /data/marc/V0606L.oib:
[testng] [2025-03-04 00:52:18,628] [pool-1-thread-4] Initializing /data/johannes/step5b.bmp:
[testng] [2025-03-04 00:52:21,978] [pool-1-thread-4] Initializing /data/molly/11OCT8.OIF:
[testng] [2025-03-04 00:52:31,968] [pool-1-thread-3] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2025-03-04 00:52:34,172] [pool-1-thread-9] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2025-03-04 00:52:39,551] [pool-1-thread-6] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2025-03-04 00:52:42,965] [pool-1-thread-10] Initializing /data/johannes/step4.bmp:
[testng] [2025-03-04 00:52:45,265] [pool-1-thread-6] Initializing /data/simon/never_worked.oib:
[testng] [2025-03-04 00:52:45,782] [pool-1-thread-10] Initializing /data/monica/Image0056.oif:
[testng] [2025-03-04 00:52:48,609] [pool-1-thread-2] Initializing /data/qa-17748/Image0079.oib:
[testng] [2025-03-04 00:52:50,079] [pool-1-thread-6] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2025-03-04 00:52:53,612] [pool-1-thread-2] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2025-03-04 00:52:58,222] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2025-03-04 00:52:59,783] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2025-03-04 00:53:03,223] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib:
[testng] [2025-03-04 00:53:04,133] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2025-03-04 00:53:05,039] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] [2025-03-04 00:53:07,499] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2025-03-04 00:53:08,272] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2025-03-04 00:53:09,835] [pool-1-thread-7] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2025-03-04 00:53:12,698] [pool-1-thread-9] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2025-03-04 00:53:15,352] [pool-1-thread-2] Initializing /data/david/Image0016.oib:
[testng] [2025-03-04 00:53:18,555] [pool-1-thread-2] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2025-03-04 00:53:19,393] [pool-1-thread-10] Initializing /data/johannes/step2.bmp:
[testng] [2025-03-04 00:53:20,109] [pool-1-thread-9] Initializing /data/molly/11OCT7.OIF:
[testng] [2025-03-04 00:53:29,308] [pool-1-thread-10] Initializing /data/stefan/yc2_live-03.oib:
[testng] [2025-03-04 00:53:36,897] [pool-1-thread-10] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2025-03-04 00:53:43,477] [pool-1-thread-10] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2025-03-04 00:53:47,848] [pool-1-thread-10] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2025-03-04 00:54:44,884] [pool-1-thread-3] Initializing /data/glen/Image0002.oif:
[testng] [2025-03-04 00:54:59,648] [pool-1-thread-12] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2025-03-04 00:55:06,635] [pool-1-thread-12] Initializing /data/molly/11OCT3.OIF:
[testng] [2025-03-04 00:56:19,253] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF:
[testng] [2025-03-04 00:56:45,428] [pool-1-thread-7] Initializing /data/glen/Null file/test no change.oif:
[testng] [2025-03-04 00:57:10,248] [pool-1-thread-7] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2025-03-04 00:57:15,085] [pool-1-thread-7] Initializing /data/glen/simulstack.oif:
[testng] [2025-03-04 01:02:01,042] [pool-1-thread-10] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2025-03-04 01:03:48,994] [pool-1-thread-6] Initializing /data/johannes/step3.bmp:
[testng] [2025-03-04 01:03:52,354] [pool-1-thread-6] Initializing /data/glen/seqlinestack.oif:
[testng] [2025-03-04 01:05:56,539] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2025-03-04 01:06:22,830] [pool-1-thread-1] Initializing /data/qa-17748/Image0098.oib:
[testng] [2025-03-04 01:06:26,394] [pool-1-thread-1] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2025-03-04 01:06:29,352] [pool-1-thread-1] Initializing /data/allan/62909#1.oib:
[testng] [2025-03-04 01:06:31,921] [pool-1-thread-1] Initializing /data/brian/FLIP.oib:
[testng] [2025-03-04 01:06:36,527] [pool-1-thread-1] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2025-03-04 01:06:41,418] [pool-1-thread-1] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2025-03-04 01:08:48,676] [pool-1-thread-11] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2025-03-04 01:08:50,133] [pool-1-thread-11] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2025-03-04 01:09:48,775] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2025-03-04 01:09:58,248] [pool-1-thread-3] Initializing /data/molly/11OCT6.OIF:
[testng] [2025-03-04 01:10:19,180] [pool-1-thread-9] Initializing /data/molly/11OCT11.OIF:
[testng] [2025-03-04 01:11:01,528] [pool-1-thread-7] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2025-03-04 01:11:05,413] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib:
[testng] [2025-03-04 01:11:10,783] [pool-1-thread-8] Initializing /data/marc/V0606J.oib:
[testng] [2025-03-04 01:11:16,561] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2025-03-04 01:11:22,287] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2025-03-04 01:11:27,752] [pool-1-thread-7] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] [2025-03-04 01:11:33,179] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oif:
[testng] [2025-03-04 01:11:47,201] [pool-1-thread-4] Initializing /data/johannes/step4b.bmp:
[testng] [2025-03-04 01:11:49,591] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2025-03-04 01:11:58,496] [pool-1-thread-4] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2025-03-04 01:12:01,376] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2025-03-04 01:12:07,197] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2025-03-04 01:12:18,978] [pool-1-thread-8] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2025-03-04 01:12:25,032] [pool-1-thread-8] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2025-03-04 01:12:28,944] [pool-1-thread-8] Initializing /data/brian/Lambda10nm.oib:
[testng] [2025-03-04 01:12:34,936] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2025-03-04 01:12:43,178] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2025-03-04 01:12:45,652] [pool-1-thread-4] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] [2025-03-04 01:12:51,334] [pool-1-thread-8] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2025-03-04 01:12:59,176] [pool-1-thread-8] Initializing /data/molly/11OCT2.OIF:
[testng] [2025-03-04 01:13:56,084] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2025-03-04 01:14:04,170] [pool-1-thread-4] Initializing /data/glen/Null file/test change.oif:
[testng] [2025-03-04 01:14:19,974] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2025-03-04 01:14:27,552] [pool-1-thread-5] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2025-03-04 01:14:33,848] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2025-03-04 01:14:40,227] [pool-1-thread-5] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] [2025-03-04 01:14:53,145] [pool-1-thread-4] Initializing /data/glen/singlesimul.oif:
[testng] [2025-03-04 01:15:55,099] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi:
[testng] [2025-03-04 01:15:58,870] [pool-1-thread-4] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2025-03-04 01:16:05,880] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2025-03-04 01:16:13,271] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2025-03-04 01:16:22,690] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2025-03-04 01:16:30,367] [pool-1-thread-4] Initializing /data/glen/notsaturated.oib:
[testng] [2025-03-04 01:16:37,227] [pool-1-thread-4] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2025-03-04 01:16:39,569] [pool-1-thread-4] Initializing /data/david/Image0016.oif:
[testng] [2025-03-04 01:18:14,342] [pool-1-thread-4] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2025-03-04 01:18:20,535] [pool-1-thread-4] Initializing /data/yasunori/series_1.oib:
[testng] [2025-03-04 01:18:26,599] [pool-1-thread-4] Initializing /data/glen/4205basal106072.oif:
[testng] [2025-03-04 01:23:09,498] [pool-1-thread-1] Initializing /data/glen/singlesimul.oib:
[testng] [2025-03-04 01:23:14,439] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2025-03-04 01:23:19,324] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib:
[testng] [2025-03-04 01:23:24,953] [pool-1-thread-1] Initializing /data/tom/zseries-test.oib:
[testng] [2025-03-04 01:23:34,100] [pool-1-thread-1] Initializing /data/aryeh/1h.oib:
[testng] [2025-03-04 01:23:42,478] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] [2025-03-04 01:23:47,869] [pool-1-thread-1] Initializing /data/glen/simulstack.oib:
[testng] [2025-03-04 01:23:52,776] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2025-03-04 01:23:59,284] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2025-03-04 01:24:07,570] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2025-03-04 01:24:12,774] [pool-1-thread-1] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] [2025-03-04 01:24:19,147] [pool-1-thread-1] Initializing /data/glen/singleseqframe.oib:
[testng] [2025-03-04 01:24:24,487] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2025-03-04 01:24:30,475] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2025-03-04 01:24:39,686] [pool-1-thread-2] Initializing /data/glen/seqlinestack.oib:
[testng] [2025-03-04 01:24:47,573] [pool-1-thread-7] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2025-03-04 01:25:47,568] [pool-1-thread-2] Initializing /data/molly/11OCT9.OIF:
[testng] [2025-03-04 01:26:38,262] [pool-1-thread-11] Initializing /data/brian/lambda02nm.oib:
[testng] [2025-03-04 01:26:46,168] [pool-1-thread-11] Initializing /data/glen/singleseqline.oif:
[testng] [2025-03-04 01:27:58,507] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF:
[testng] [2025-03-04 01:28:44,068] [pool-1-thread-1] Initializing /data/karl/Image0009.oib:
[testng] [2025-03-04 01:28:49,133] [pool-1-thread-1] Initializing /data/aryeh/control_test.oib:
[testng] [2025-03-04 01:29:12,548] [pool-1-thread-1] Initializing /data/glen/notsaturated.oif:
[testng] 02:21:17,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:21:17,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:21:17,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-04_02-21-17.log]
[testng] 02:21:17,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4aa36baf - End of configuration.
[testng] 02:29:55,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:29:55,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:29:55,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-04_02-29-55.log]
[testng] 02:29:55,133 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54eaf69d - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 105 minutes 38 seconds
Finished: SUCCESS