Started by upstream project "BIOFORMATS-test-repo" build number 364 originally caused by: Started by upstream project "Trigger" build number 390 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11986283167351546298.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_58092_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:32:52,408 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 03:32:52,410 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 03:32:52,410 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:52,411 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:32:52,411 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:32:52,411 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:32:52,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:32:52,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:52,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:32:52,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:32:52,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:32:52,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:32:52,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:32:52,578 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:32:52,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:32:52,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:32:52,605 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:32:52,605 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:32:52,605 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:32:52,605 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:32:52,606 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 03:32:52,607 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 03:32:52,607 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-04 03:32:52,615] [main] java.version = 11.0.16 [testng] 03:32:52,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:32:52,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:32:52,660 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-04_03-32-52.log] [testng] 03:32:52,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-04 03:32:52,664] [main] testng.directory = /data [testng] [2025-03-04 03:32:52,664] [main] testng.configDirectory = /config [testng] [2025-03-04 03:32:52,673] [main] testng.multiplier = 1.0 [testng] [2025-03-04 03:32:52,675] [main] testng.in-memory = false [testng] [2025-03-04 03:32:52,675] [main] testng.allow-missing = false [testng] [2025-03-04 03:32:52,675] [main] user.language = en [testng] [2025-03-04 03:32:52,675] [main] user.country = ${user.country} [testng] [2025-03-04 03:32:52,675] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-04 03:33:49,723] [main] ---------------------------------------- [testng] [2025-03-04 03:33:49,724] [main] Total files: 15735 [testng] [2025-03-04 03:33:49,724] [main] Scan time: 57.048 s (3 ms/file) [testng] [2025-03-04 03:33:49,724] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-04 03:35:05,718] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] 03:35:05,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:35:05,719 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:05,721 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-04_03-35-05.log] [testng] 03:35:05,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@484e97e6 - End of configuration. [testng] [2025-03-04 03:35:06,535] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] 03:35:06,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:35:06,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:06,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-04_03-35-06.log] [testng] 03:35:06,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f5154c7 - End of configuration. [testng] [2025-03-04 03:35:07,339] [pool-1-thread-11] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] 03:35:07,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:35:07,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:07,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-04_03-35-07.log] [testng] 03:35:07,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@629e532e - End of configuration. [testng] [2025-03-04 03:35:07,738] [pool-1-thread-10] Initializing /data/converted/vladan/vladan.tif: [testng] 03:35:07,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:35:07,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:07,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-04_03-35-07.log] [testng] 03:35:07,739 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a6ae2fb - End of configuration. [testng] [2025-03-04 03:35:08,230] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:35:08,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:35:08,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:08,231 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-04_03-35-08.log] [testng] 03:35:08,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75c9fb02 - End of configuration. [testng] [2025-03-04 03:35:08,604] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 03:35:08,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:35:08,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:08,604 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-04_03-35-08.log] [testng] 03:35:08,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e29af3 - End of configuration. [testng] [2025-03-04 03:35:10,209] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] 03:35:10,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:35:10,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:10,210 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-04_03-35-10.log] [testng] 03:35:10,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b4f8bf1 - End of configuration. [testng] [2025-03-04 03:35:10,696] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] 03:35:10,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:35:10,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:10,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-04_03-35-10.log] [testng] 03:35:10,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fbffa9f - End of configuration. [testng] [2025-03-04 03:35:11,029] [pool-1-thread-5] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] 03:35:11,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:35:11,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:11,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-04_03-35-11.log] [testng] 03:35:11,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c2deafb - End of configuration. [testng] [2025-03-04 03:35:11,372] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] 03:35:11,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:35:11,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:11,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-04_03-35-11.log] [testng] 03:35:11,373 |-INFO in ch.qos.logback.core.sift.SiftProcessor@531b272f - End of configuration. [testng] [2025-03-04 03:35:11,728] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 03:35:11,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:35:11,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:11,729 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-04_03-35-11.log] [testng] 03:35:11,729 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3605706 - End of configuration. [testng] [2025-03-04 03:35:12,116] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] 03:35:12,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:35:12,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:35:12,117 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-04_03-35-12.log] [testng] 03:35:12,118 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47d1c76a - End of configuration. [testng] [2025-03-04 03:35:25,956] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-03-04 03:35:26,934] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-04 03:35:27,971] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-04 03:35:29,991] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-04 03:35:33,778] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-04 03:35:35,546] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-04 03:35:41,382] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-03-04 03:35:44,871] [pool-1-thread-6] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-04 03:35:49,820] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-04 03:36:04,773] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-03-04 03:36:10,720] [pool-1-thread-9] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-04 03:36:26,819] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-03-04 03:36:31,121] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-04 03:36:49,775] [pool-1-thread-9] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-03-04 03:37:41,496] [pool-1-thread-2] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-03-04 03:37:54,613] [pool-1-thread-2] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-04 03:38:07,792] [pool-1-thread-2] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-03-04 03:38:08,696] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-04 03:38:27,207] [pool-1-thread-2] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-03-04 03:38:29,357] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-04 03:38:40,368] [pool-1-thread-10] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-03-04 03:39:14,553] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-04 03:39:34,889] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-04 03:39:54,426] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-04 03:39:59,840] [pool-1-thread-2] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-04 03:40:22,980] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-04 03:40:25,724] [pool-1-thread-12] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-04 03:40:36,621] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-04 03:40:39,696] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-04 03:40:42,122] [pool-1-thread-6] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-04 03:40:43,089] [pool-1-thread-12] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-04 03:41:15,052] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-04 03:41:15,909] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-03-04 03:41:28,689] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-04 03:41:44,863] [pool-1-thread-5] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-04 03:41:54,290] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-03-04 03:42:00,998] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-04 03:42:35,214] [pool-1-thread-9] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-04 03:42:41,557] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-03-04 03:42:56,259] [pool-1-thread-9] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-04 03:43:12,438] [pool-1-thread-2] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-04 03:43:30,410] [pool-1-thread-2] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-04 03:43:52,081] [pool-1-thread-2] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-04 03:45:03,707] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-04 03:46:11,388] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-03-04 03:46:19,764] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-04 03:46:26,530] [pool-1-thread-5] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-04 03:46:37,564] [pool-1-thread-4] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-04 03:46:43,704] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-03-04 03:46:54,910] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-04 03:46:56,917] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-04 03:47:25,366] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-03-04 03:49:03,167] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-04 03:50:53,941] [pool-1-thread-3] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-03-04 03:51:42,335] [pool-1-thread-1] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-03-04 03:52:24,108] [pool-1-thread-12] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-04 03:52:51,448] [pool-1-thread-6] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-03-04 03:53:25,447] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-04 03:53:26,782] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-04 03:54:01,403] [pool-1-thread-5] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-03-04 03:54:09,303] [pool-1-thread-12] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-04 03:54:44,654] [pool-1-thread-2] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-04 03:54:57,146] [pool-1-thread-4] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-04 03:55:01,497] [pool-1-thread-1] Initializing /data/converted/converted/damian.tif: [testng] [2025-03-04 03:55:20,650] [pool-1-thread-1] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-03-04 03:55:47,656] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-04 03:55:58,644] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-03-04 03:56:36,172] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-04 03:57:05,827] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-04 03:57:40,649] [pool-1-thread-6] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-04 03:58:30,614] [pool-1-thread-6] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-04 03:58:34,853] [pool-1-thread-2] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-04 03:59:38,026] [pool-1-thread-2] Initializing /data/converted/dietmar/138.tif: [testng] [2025-03-04 04:00:30,247] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-04 04:03:08,028] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-04 04:04:13,328] [pool-1-thread-10] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-04 04:04:19,494] [pool-1-thread-4] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-04 04:04:42,052] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-04 04:04:52,180] [pool-1-thread-4] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-04 04:05:08,716] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-04 04:05:18,245] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-04 04:06:54,025] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-04 04:08:05,534] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-04 04:08:09,364] [pool-1-thread-6] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-03-04 04:08:56,134] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-04 04:09:33,780] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-03-04 04:09:44,883] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-04 04:12:43,788] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-04 04:12:55,215] [pool-1-thread-9] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-04 04:13:01,543] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-03-04 04:13:06,846] [pool-1-thread-10] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-03-04 04:13:29,080] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-04 04:13:59,977] [pool-1-thread-10] Initializing /data/converted/converted/2chz.tif: [testng] [2025-03-04 04:15:24,899] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-04 04:15:55,295] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-03-04 04:16:20,071] [pool-1-thread-3] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-04 04:16:43,295] [pool-1-thread-3] Initializing /data/converted/michel/d.tif: [testng] [2025-03-04 04:16:54,277] [pool-1-thread-10] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-03-04 04:17:14,441] [pool-1-thread-3] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-03-04 04:17:26,497] [pool-1-thread-11] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-04 04:17:42,185] [pool-1-thread-6] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-04 04:17:52,516] [pool-1-thread-2] Initializing /data/converted/michel/e.tif: [testng] [2025-03-04 04:17:58,185] [pool-1-thread-11] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-04 04:18:12,153] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-04 04:18:27,531] [pool-1-thread-8] Initializing /data/converted/michel/a.tif: [testng] [2025-03-04 04:18:29,979] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-04 04:19:00,550] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-04 04:19:02,466] [pool-1-thread-2] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-04 04:19:32,371] [pool-1-thread-8] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-03-04 04:19:39,231] [pool-1-thread-2] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-03-04 04:19:55,296] [pool-1-thread-4] Initializing /data/converted/michel/c.tif: [testng] [2025-03-04 04:20:08,359] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-04 04:20:30,531] [pool-1-thread-12] Initializing /data/othmar/mozaic.tif: [testng] 04:59:47,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:59:47,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:59:47,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-04_04-59-47.log] [testng] 04:59:47,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34454592 - End of configuration. [testng] 05:02:52,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:02:52,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:02:52,958 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-04_05-02-52.log] [testng] 05:02:52,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c92d694 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 90 minutes 6 seconds Finished: SUCCESS