Started by upstream project "BIOFORMATS-test-repo" build number 365
originally caused by:
Started by upstream project "Trigger" build number 391
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins5974627168614844577.sh
+ '[' fv1000 = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58170_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:44:45,524 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 00:44:45,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
[testng] 00:44:45,525 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:45,526 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:44:45,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:44:45,527 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:44:45,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:44:45,527 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:45,528 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:44:45,528 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:44:45,529 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:44:45,529 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:44:45,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:44:45,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:44:45,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:44:45,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:44:45,749 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:44:45,749 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:44:45,749 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:44:45,750 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:44:45,750 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
[testng] 00:44:45,751 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
[testng] 00:44:45,751 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 223 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-05 00:44:45,760] [main] java.version = 17.0.2
[testng] 00:44:45,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:44:45,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:44:45,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-05_00-44-45.log]
[testng] 00:44:45,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
[testng] [2025-03-05 00:44:45,813] [main] testng.directory = /data
[testng] [2025-03-05 00:44:45,813] [main] testng.configDirectory = /config
[testng] [2025-03-05 00:44:45,821] [main] testng.multiplier = 1.0
[testng] [2025-03-05 00:44:45,822] [main] testng.in-memory = false
[testng] [2025-03-05 00:44:45,822] [main] testng.allow-missing = false
[testng] [2025-03-05 00:44:45,822] [main] user.language = en
[testng] [2025-03-05 00:44:45,822] [main] user.country = ${user.country}
[testng] [2025-03-05 00:44:45,822] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-05 00:45:03,480] [main] ----------------------------------------
[testng] [2025-03-05 00:45:03,481] [main] Total files: 259
[testng] [2025-03-05 00:45:03,481] [main] Scan time: 17.658 s (68 ms/file)
[testng] [2025-03-05 00:45:03,481] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 144 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-05 00:51:10,160] [pool-1-thread-1] Initializing /data/bojana/XYT_FirstBolus.oib:
[testng] 00:51:10,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:51:10,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:10,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-05_00-51-10.log]
[testng] 00:51:10,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19b09a97 - End of configuration.
[testng] [2025-03-05 00:51:10,571] [pool-1-thread-12] Initializing /data/stefan/yc2_live-03.oib:
[testng] 00:51:10,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:51:10,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:10,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-05_00-51-10.log]
[testng] 00:51:10,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66b107cd - End of configuration.
[testng] [2025-03-05 00:51:11,479] [pool-1-thread-11] Initializing /data/shane/Data Subset/NESTIN_control2.oif:
[testng] 00:51:11,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:51:11,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:11,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-05_00-51-11.log]
[testng] 00:51:11,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7914afa9 - End of configuration.
[testng] [2025-03-05 00:51:12,072] [pool-1-thread-10] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib:
[testng] 00:51:12,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:51:12,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:12,073 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-05_00-51-12.log]
[testng] 00:51:12,073 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7aa4b958 - End of configuration.
[testng] [2025-03-05 00:51:12,535] [pool-1-thread-9] Initializing /data/glen/LUT issue/UVgreenredfarred.oif:
[testng] 00:51:12,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:51:12,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:12,536 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-05_00-51-12.log]
[testng] 00:51:12,536 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a002f1 - End of configuration.
[testng] [2025-03-05 00:51:13,142] [pool-1-thread-8] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib:
[testng] 00:51:13,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:51:13,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:13,143 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-05_00-51-13.log]
[testng] 00:51:13,143 |-INFO in ch.qos.logback.core.sift.SiftProcessor@524de17f - End of configuration.
[testng] [2025-03-05 00:51:17,079] [pool-1-thread-7] Initializing /data/yasunori/series_1.oib:
[testng] 00:51:17,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:51:17,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:17,080 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-05_00-51-17.log]
[testng] 00:51:17,080 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f07fc19 - End of configuration.
[testng] [2025-03-05 00:51:17,529] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp:
[testng] 00:51:17,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:51:17,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:17,530 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-05_00-51-17.log]
[testng] 00:51:17,531 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b40e4ec - End of configuration.
[testng] [2025-03-05 00:51:17,620] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib:
[testng] 00:51:17,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:51:17,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:17,621 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-05_00-51-17.log]
[testng] 00:51:17,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bbd8a9e - End of configuration.
[testng] [2025-03-05 00:51:18,114] [pool-1-thread-4] Initializing /data/aryeh/030408 2 1.oib:
[testng] 00:51:18,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:51:18,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:18,114 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-05_00-51-18.log]
[testng] 00:51:18,115 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a87b0b0 - End of configuration.
[testng] [2025-03-05 00:51:18,575] [pool-1-thread-3] Initializing /data/glen/singlesimul.oif:
[testng] 00:51:18,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:51:18,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:18,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-05_00-51-18.log]
[testng] 00:51:18,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b92663 - End of configuration.
[testng] [2025-03-05 00:51:19,125] [pool-1-thread-2] Initializing /data/glen/simulstack.oib:
[testng] 00:51:19,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:51:19,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:51:19,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-05_00-51-19.log]
[testng] 00:51:19,126 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10033bd5 - End of configuration.
[testng] [2025-03-05 00:51:22,158] [pool-1-thread-6] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib:
[testng] [2025-03-05 00:51:24,097] [pool-1-thread-1] Initializing /data/brian/PA-GFPv-2.oib:
[testng] [2025-03-05 00:51:24,797] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF:
[testng] [2025-03-05 00:51:34,781] [pool-1-thread-5] Initializing /data/alex/31h_pea3_fgf10_01_1.oif:
[testng] [2025-03-05 00:51:36,749] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib:
[testng] [2025-03-05 00:51:37,090] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif:
[testng] [2025-03-05 00:51:37,574] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib:
[testng] [2025-03-05 00:51:39,125] [pool-1-thread-12] Initializing /data/brian/FLIP.oib:
[testng] [2025-03-05 00:51:41,896] [pool-1-thread-4] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif:
[testng] [2025-03-05 00:51:45,383] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF:
[testng] [2025-03-05 00:51:57,524] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib:
[testng] [2025-03-05 00:51:58,342] [pool-1-thread-7] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib:
[testng] [2025-03-05 00:52:00,354] [pool-1-thread-12] Initializing /data/molly/11OCT5.OIF:
[testng] [2025-03-05 00:52:08,679] [pool-1-thread-3] Initializing /data/jae/Image0001.oib:
[testng] [2025-03-05 00:52:09,279] [pool-1-thread-11] Initializing /data/johannes/step3.bmp:
[testng] [2025-03-05 00:52:09,366] [pool-1-thread-9] Initializing /data/glen/notsaturated.oif:
[testng] [2025-03-05 00:52:13,009] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib:
[testng] [2025-03-05 00:52:13,735] [pool-1-thread-1] Initializing /data/glen/LUT issue/60x11.oif:
[testng] [2025-03-05 00:52:16,256] [pool-1-thread-10] Initializing /data/aryeh/BP3 3h ch2.oif:
[testng] [2025-03-05 00:52:37,282] [pool-1-thread-7] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp:
[testng] [2025-03-05 00:52:38,707] [pool-1-thread-7] Initializing /data/glen/singlesimul.oib:
[testng] [2025-03-05 00:52:39,601] [pool-1-thread-3] Initializing /data/simon/used_to_work.oib:
[testng] [2025-03-05 00:52:41,281] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib:
[testng] [2025-03-05 00:52:43,179] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib:
[testng] [2025-03-05 00:52:43,746] [pool-1-thread-11] Initializing /data/tom/RGB-1.avi:
[testng] [2025-03-05 00:52:45,387] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif:
[testng] [2025-03-05 00:52:48,364] [pool-1-thread-11] Initializing /data/yoshihito/XY.oib:
[testng] [2025-03-05 00:52:48,977] [pool-1-thread-8] Initializing /data/shane/Data Subset/EXX6-10G30%.oib:
[testng] [2025-03-05 00:52:49,847] [pool-1-thread-7] Initializing /data/glen/Image0002.oif:
[testng] [2025-03-05 00:52:55,261] [pool-1-thread-11] Initializing /data/brian/NEURON_TIMELAPS_2.oib:
[testng] [2025-03-05 00:52:56,551] [pool-1-thread-8] Initializing /data/brian/MitoRed-POPO3.oib:
[testng] [2025-03-05 00:53:01,738] [pool-1-thread-8] Initializing /data/glen/4205basal106072.oif:
[testng] [2025-03-05 00:53:07,989] [pool-1-thread-11] Initializing /data/molly/11OCT8.OIF:
[testng] [2025-03-05 00:56:17,107] [pool-1-thread-3] Initializing /data/brian/Rhodamine-PI-1.oib:
[testng] [2025-03-05 00:56:24,041] [pool-1-thread-3] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib:
[testng] [2025-03-05 00:56:31,648] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/4.oib:
[testng] [2025-03-05 00:56:37,085] [pool-1-thread-3] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib:
[testng] [2025-03-05 00:56:45,752] [pool-1-thread-3] Initializing /data/qa-17748/Image0098.oib:
[testng] [2025-03-05 00:56:54,102] [pool-1-thread-3] Initializing /data/stephane/817A_3-0003_01.oib:
[testng] [2025-03-05 00:56:59,763] [pool-1-thread-3] Initializing /data/glen/LUT issue/Greenredfarred.oif:
[testng] [2025-03-05 00:57:47,192] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif:
[testng] [2025-03-05 01:00:12,306] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib:
[testng] [2025-03-05 01:00:20,132] [pool-1-thread-9] Initializing /data/brian/Caged Glu-3 point.oib:
[testng] [2025-03-05 01:00:27,735] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3.oib:
[testng] [2025-03-05 01:00:35,081] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif:
[testng] [2025-03-05 01:01:18,540] [pool-1-thread-3] Initializing /data/glen/simulstack.oif:
[testng] [2025-03-05 01:05:17,506] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif:
[testng] [2025-03-05 01:06:40,400] [pool-1-thread-5] Initializing /data/stefan/YC2_spectrum-405.oib:
[testng] [2025-03-05 01:06:45,600] [pool-1-thread-5] Initializing /data/johannes/step4b.bmp:
[testng] [2025-03-05 01:06:48,061] [pool-1-thread-5] Initializing /data/glen/singleseqframe.oib:
[testng] [2025-03-05 01:06:52,252] [pool-1-thread-5] Initializing /data/marc/V0606L.oib:
[testng] [2025-03-05 01:07:09,940] [pool-1-thread-5] Initializing /data/ramon/Image_01_01_01_01.oif:
[testng] [2025-03-05 01:07:22,400] [pool-1-thread-1] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib:
[testng] [2025-03-05 01:07:28,409] [pool-1-thread-1] Initializing /data/christian/20min.oif:
[testng] [2025-03-05 01:07:50,472] [pool-1-thread-1] Initializing /data/brian/CFP-GFP2.oib:
[testng] [2025-03-05 01:07:55,178] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7a.oib:
[testng] [2025-03-05 01:08:00,386] [pool-1-thread-1] Initializing /data/glen/QuitIJ/4202A2chtest.oib:
[testng] [2025-03-05 01:08:05,322] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib:
[testng] [2025-03-05 01:08:11,325] [pool-1-thread-1] Initializing /data/monica/Image0056.oif:
[testng] [2025-03-05 01:08:59,222] [pool-1-thread-1] Initializing /data/johannes/step1.bmp:
[testng] [2025-03-05 01:09:01,239] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif:
[testng] [2025-03-05 01:09:38,727] [pool-1-thread-5] Initializing /data/sten/01.oib:
[testng] [2025-03-05 01:09:45,986] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif:
[testng] [2025-03-05 01:11:01,136] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib:
[testng] [2025-03-05 01:11:06,619] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib:
[testng] [2025-03-05 01:11:10,767] [pool-1-thread-7] Initializing /data/simon/never_worked.oib:
[testng] [2025-03-05 01:11:14,703] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib:
[testng] [2025-03-05 01:11:18,006] [pool-1-thread-7] Initializing /data/glen/Null file/test no change.oif:
[testng] [2025-03-05 01:11:36,075] [pool-1-thread-12] Initializing /data/glen/111407.oif:
[testng] [2025-03-05 01:11:42,522] [pool-1-thread-4] Initializing /data/jcb/200909024/Sup Fig 2/2.oib:
[testng] [2025-03-05 01:11:43,616] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF:
[testng] [2025-03-05 01:12:01,285] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib:
[testng] [2025-03-05 01:12:05,390] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib:
[testng] [2025-03-05 01:12:06,628] [pool-1-thread-4] Initializing /data/johannes/step2.bmp:
[testng] [2025-03-05 01:12:08,808] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib:
[testng] [2025-03-05 01:12:12,147] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif:
[testng] [2025-03-05 01:12:17,785] [pool-1-thread-4] Initializing /data/glen/singleseqframe.oif:
[testng] [2025-03-05 01:13:06,954] [pool-1-thread-4] Initializing /data/allan/new_30min3_1z2.oib:
[testng] [2025-03-05 01:13:12,096] [pool-1-thread-4] Initializing /data/barbara/Image_with_working_import.oib:
[testng] [2025-03-05 01:13:16,747] [pool-1-thread-4] Initializing /data/glen/15min 200neo lyso SO1.oib:
[testng] [2025-03-05 01:13:21,654] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oif:
[testng] [2025-03-05 01:13:41,584] [pool-1-thread-2] Initializing /data/david/Image0016.oif:
[testng] [2025-03-05 01:15:34,778] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif:
[testng] [2025-03-05 01:16:25,469] [pool-1-thread-2] Initializing /data/glen/singleseqline.oib:
[testng] [2025-03-05 01:16:36,177] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib:
[testng] [2025-03-05 01:16:39,717] [pool-1-thread-3] Initializing /data/brian/lambda02nm.oib:
[testng] [2025-03-05 01:16:52,126] [pool-1-thread-3] Initializing /data/johannes/step4.bmp:
[testng] [2025-03-05 01:16:52,793] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oif:
[testng] [2025-03-05 01:17:00,845] [pool-1-thread-3] Initializing /data/karl/Image0009.oib:
[testng] [2025-03-05 01:17:09,348] [pool-1-thread-6] Initializing /data/allan/62909#1.oib:
[testng] [2025-03-05 01:17:12,518] [pool-1-thread-3] Initializing /data/glen/Null file/test change.oif:
[testng] [2025-03-05 01:17:20,696] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib:
[testng] [2025-03-05 01:17:57,252] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib:
[testng] [2025-03-05 01:18:01,009] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF:
[testng] [2025-03-05 01:18:32,818] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib:
[testng] [2025-03-05 01:18:42,601] [pool-1-thread-6] Initializing /data/molly/11OCT7.OIF:
[testng] [2025-03-05 01:19:10,054] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib:
[testng] [2025-03-05 01:19:19,584] [pool-1-thread-3] Initializing /data/brian/Kaede15.oib:
[testng] [2025-03-05 01:19:28,707] [pool-1-thread-3] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif:
[testng] [2025-03-05 01:20:53,082] [pool-1-thread-8] Initializing /data/pedro/plv-test.oib:
[testng] [2025-03-05 01:20:59,786] [pool-1-thread-8] Initializing /data/jean-claude/villositerat0heurea.oib:
[testng] [2025-03-05 01:21:05,558] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp:
[testng] [2025-03-05 01:21:07,736] [pool-1-thread-8] Initializing /data/molly/11OCT3.OIF:
[testng] [2025-03-05 01:29:08,548] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib:
[testng] [2025-03-05 01:29:22,035] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif:
[testng] [2025-03-05 01:30:43,740] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib:
[testng] [2025-03-05 01:30:54,110] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib:
[testng] [2025-03-05 01:31:34,505] [pool-1-thread-1] Initializing /data/marc/V0606J.oib:
[testng] [2025-03-05 01:31:58,203] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oib:
[testng] [2025-03-05 01:32:07,983] [pool-1-thread-1] Initializing /data/dan/outerEV1solu6new.oib:
[testng] [2025-03-05 01:32:18,429] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib:
[testng] [2025-03-05 01:32:29,990] [pool-1-thread-1] Initializing /data/molly/11OCT9.OIF:
[testng] [2025-03-05 01:34:14,809] [pool-1-thread-3] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif:
[testng] [2025-03-05 01:35:13,190] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib:
[testng] [2025-03-05 01:35:21,641] [pool-1-thread-12] Initializing /data/michael/CELL3.oib:
[testng] [2025-03-05 01:35:27,883] [pool-1-thread-12] Initializing /data/molly/13SH2bUTRtime4b.oib:
[testng] [2025-03-05 01:35:36,279] [pool-1-thread-12] Initializing /data/brian/Lambda10nm.oib:
[testng] [2025-03-05 01:35:42,477] [pool-1-thread-12] Initializing /data/lavinia/NM1-RibA-RibB-side.oib:
[testng] [2025-03-05 01:35:50,355] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib:
[testng] [2025-03-05 01:35:52,265] [pool-1-thread-2] Initializing /data/aryeh/1h.oib:
[testng] [2025-03-05 01:36:00,036] [pool-1-thread-12] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib:
[testng] [2025-03-05 01:36:04,017] [pool-1-thread-2] Initializing /data/tom/zseries-test.oib:
[testng] [2025-03-05 01:36:08,266] [pool-1-thread-12] Initializing /data/brian/Al488-yoyo1-2.oib:
[testng] [2025-03-05 01:36:13,905] [pool-1-thread-2] Initializing /data/glen/singleseqline.oif:
[testng] [2025-03-05 01:36:16,455] [pool-1-thread-12] Initializing /data/molly/11OCT2.OIF:
[testng] [2025-03-05 01:37:19,280] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib:
[testng] [2025-03-05 01:37:34,954] [pool-1-thread-2] Initializing /data/aryeh/control_test.oib:
[testng] [2025-03-05 01:38:02,681] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib:
[testng] [2025-03-05 01:38:07,913] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX4-10G40%.oib:
[testng] [2025-03-05 01:38:09,213] [pool-1-thread-9] Initializing /data/david/Image0016.oib:
[testng] [2025-03-05 01:38:13,610] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib:
[testng] [2025-03-05 01:38:15,322] [pool-1-thread-9] Initializing /data/kay/IM2pg.oib:
[testng] 02:08:47,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:08:47,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:47,739 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-05_02-08-47.log]
[testng] 02:08:47,739 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d0aa834 - End of configuration.
[testng] 03:13:05,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 03:13:05,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:13:05,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-05_03-13-05.log]
[testng] 03:13:05,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@699224a1 - End of configuration.
[testng] 03:26:30,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 03:26:30,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:26:30,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-05_03-26-30.log]
[testng] 03:26:30,156 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e9c23b7 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7632, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 161 minutes 49 seconds
Finished: SUCCESS