Started by upstream project "BIOFORMATS-test-repo" build number 365
originally caused by:
Started by upstream project "Trigger" build number 391
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins4643688276059497574.sh
+ '[' sxm = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58217_merge_ci -v /uod/idr/repos/curated/sxm:/data -v /uod/idr-scratch/merge-ci/curated/sxm:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:57:51,921 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 01:57:51,922 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
[testng] 01:57:51,922 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:57:51,923 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:57:51,923 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:57:51,924 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:57:51,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:57:51,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:57:51,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:57:51,925 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:57:51,925 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:57:51,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:57:52,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:57:52,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:57:52,113 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:57:52,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:57:52,119 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:57:52,120 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:57:52,120 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:57:52,120 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:57:52,120 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
[testng] 01:57:52,121 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
[testng] 01:57:52,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 196 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-05 01:57:52,130] [main] java.version = 17.0.2
[testng] 01:57:52,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:57:52,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:57:52,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-05_01-57-52.log]
[testng] 01:57:52,176 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
[testng] [2025-03-05 01:57:52,178] [main] testng.directory = /data
[testng] [2025-03-05 01:57:52,178] [main] testng.configDirectory = /config
[testng] [2025-03-05 01:57:52,187] [main] testng.multiplier = 1.0
[testng] [2025-03-05 01:57:52,188] [main] testng.in-memory = false
[testng] [2025-03-05 01:57:52,188] [main] testng.allow-missing = false
[testng] [2025-03-05 01:57:52,188] [main] user.language = en
[testng] [2025-03-05 01:57:52,188] [main] user.country = ${user.country}
[testng] [2025-03-05 01:57:52,188] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-05 02:03:22,656] [main] ----------------------------------------
[testng] [2025-03-05 02:03:22,657] [main] Total files: 268
[testng] [2025-03-05 02:03:22,657] [main] Scan time: 330.468 s (1233 ms/file)
[testng] [2025-03-05 02:03:22,657] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 160 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-05 02:08:44,314] [pool-1-thread-1] Initializing /data/steve/JPK Instr (Christian L)/Titanium-implant.jpk:
[testng] 02:08:44,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:08:44,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:44,316 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-05_02-08-44.log]
[testng] 02:08:44,317 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61cc834d - End of configuration.
[testng] [2025-03-05 02:08:45,938] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031004.afm:
[testng] 02:08:45,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:08:45,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:45,939 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-05_02-08-45.log]
[testng] 02:08:45,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a7a06ea - End of configuration.
[testng] [2025-03-05 02:08:46,771] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.TIF:
[testng] 02:08:46,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:08:46,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:46,772 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-05_02-08-46.log]
[testng] 02:08:46,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44e592f9 - End of configuration.
[testng] [2025-03-05 02:08:49,354] [pool-1-thread-10] Initializing /data/steve/VG SAM (Karen)/BGND.DTI:
[testng] 02:08:49,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:08:49,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:49,356 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-05_02-08-49.log]
[testng] 02:08:49,356 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f76d63d - End of configuration.
[testng] [2025-03-05 02:08:50,140] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_02.SM2:
[testng] 02:08:50,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:08:50,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:50,140 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-05_02-08-50.log]
[testng] 02:08:50,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59f642a0 - End of configuration.
[testng] [2025-03-05 02:08:50,948] [pool-1-thread-8] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.zfr:
[testng] 02:08:50,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:08:50,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:50,949 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-05_02-08-50.log]
[testng] 02:08:50,950 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2193e3f1 - End of configuration.
[testng] [2025-03-05 02:08:51,559] [pool-1-thread-7] Initializing /data/steve/TIFF/Macrophage cell images/T48-44 800 24-bit.tif:
[testng] 02:08:51,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:08:51,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:51,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-05_02-08-51.log]
[testng] 02:08:51,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25678a7 - End of configuration.
[testng] [2025-03-05 02:08:53,669] [pool-1-thread-6] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm2.afm:
[testng] 02:08:53,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:08:53,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:53,671 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-05_02-08-53.log]
[testng] 02:08:53,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f7b66ba - End of configuration.
[testng] [2025-03-05 02:08:54,386] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_03.SM2:
[testng] 02:08:54,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:08:54,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:54,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-05_02-08-54.log]
[testng] 02:08:54,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fd9e3cd - End of configuration.
[testng] [2025-03-05 02:08:55,177] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY:
[testng] 02:08:55,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:08:55,177 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:55,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-05_02-08-55.log]
[testng] 02:08:55,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@578ebfbf - End of configuration.
[testng] [2025-03-05 02:08:55,603] [pool-1-thread-3] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEB.IMG:
[testng] 02:08:55,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:08:55,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:55,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-05_02-08-55.log]
[testng] 02:08:55,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15afdac1 - End of configuration.
[testng] [2025-03-05 02:08:56,719] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/IM_P1.TFR:
[testng] 02:08:56,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:08:56,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:08:56,720 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-05_02-08-56.log]
[testng] 02:08:56,721 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30efffc4 - End of configuration.
[testng] [2025-03-05 02:09:02,388] [pool-1-thread-4] Initializing /data/steve/SBIG/M81 H 250s Tr=5s:
[testng] [2025-03-05 02:09:05,833] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEA.IMG:
[testng] [2025-03-05 02:09:06,868] [pool-1-thread-2] Initializing /data/steve/TIFF/Hough test TIFF:
[testng] [2025-03-05 02:09:09,042] [pool-1-thread-12] Initializing /data/steve/Misc SXM test images/BMP images/m20_p.bmp:
[testng] [2025-03-05 02:09:09,232] [pool-1-thread-6] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-1a.HIS:
[testng] [2025-03-05 02:09:09,874] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm3:
[testng] [2025-03-05 02:09:10,194] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo STM v4 (Gabriella)/159HF02.ZFP:
[testng] [2025-03-05 02:09:10,977] [pool-1-thread-8] Initializing /data/steve/Gatan/TEM (Larry Thomas)/TEM 10 KX:
[testng] [2025-03-05 02:09:12,491] [pool-1-thread-1] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (8 rpts) TIFF:
[testng] [2025-03-05 02:09:16,446] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/T24-24 1600 36_48-bit.tif:
[testng] [2025-03-05 02:09:19,063] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50.ffr:
[testng] [2025-03-05 02:09:19,891] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/SloanSpec.SM2:
[testng] [2025-03-05 02:09:20,724] [pool-1-thread-11] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm1.afm:
[testng] [2025-03-05 02:09:21,739] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMei3.pict:
[testng] [2025-03-05 02:09:22,271] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50ffr.tif:
[testng] [2025-03-05 02:09:24,265] [pool-1-thread-3] Initializing /data/steve/JEOL/SEM (Steve Foulds)/IPS2000.DAT:
[testng] [2025-03-05 02:09:25,143] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Hough transform/Nathalie's test:
[testng] [2025-03-05 02:09:29,399] [pool-1-thread-4] Initializing /data/steve/TIFF/CONCRETE TIFF:
[testng] [2025-03-05 02:09:31,617] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/BF super alliage.dm3:
[testng] [2025-03-05 02:09:31,885] [pool-1-thread-9] Initializing /data/steve/JEOL/WinSem (Sue)/TA.IMG:
[testng] [2025-03-05 02:09:32,664] [pool-1-thread-11] Initializing /data/steve/Misc SXM test images/AVI movie/Clean Cu(110) LEED.avi:
[testng] [2025-03-05 02:09:33,100] [pool-1-thread-8] Initializing /data/steve/Zeiss LSM/Zeiss LSM - 2 samp:pix (??)/16bcutagain.lsm:
[testng] [2025-03-05 02:09:34,106] [pool-1-thread-2] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_01.SM2:
[testng] [2025-03-05 02:09:35,159] [pool-1-thread-5] Initializing /data/steve/SM-Camera/Orhan + IPES rig:
[testng] [2025-03-05 02:09:37,503] [pool-1-thread-1] Initializing /data/steve/Burleigh/Burleigh v1/Burleigh.IMG:
[testng] [2025-03-05 02:09:40,899] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEE.IMG:
[testng] [2025-03-05 02:09:42,029] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/03-17-05A.afm:
[testng] [2025-03-05 02:09:43,487] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/SCREEN1.PICT:
[testng] [2025-03-05 02:09:44,635] [pool-1-thread-2] Initializing /data/steve/TIFF/CD-ROM TIFF:
[testng] [2025-03-05 02:09:47,200] [pool-1-thread-11] Initializing /data/steve/FITS/Meade DSI/M31bR1.fts:
[testng] [2025-03-05 02:09:48,607] [pool-1-thread-8] Initializing /data/steve/SBIG/M82 H 100s Tr=10s:
[testng] [2025-03-05 02:09:50,820] [pool-1-thread-6] Initializing /data/steve/TIFF/Macrophage cell images/Pre-d-0 1392 36-bit.tif:
[testng] [2025-03-05 02:09:51,778] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan TIFF/THE FLY 4 TIFF:
[testng] [2025-03-05 02:09:53,848] [pool-1-thread-9] Initializing /data/steve/TIFF/ta123 stack TIFF:
[testng] [2025-03-05 02:09:55,994] [pool-1-thread-4] Initializing /data/steve/FITS/Meade DSI/M31bB1.fts:
[testng] [2025-03-05 02:09:56,413] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v4.19 (Michael Z)/Wafer_vesicles_2min_010.STP:
[testng] [2025-03-05 02:09:57,924] [pool-1-thread-11] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_3.img:
[testng] [2025-03-05 02:10:01,013] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 2.5:
[testng] [2025-03-05 02:10:02,026] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000K.SM3:
[testng] [2025-03-05 02:10:03,303] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan (Sue D)/Honey Bee:
[testng] [2025-03-05 02:10:03,778] [pool-1-thread-10] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 2:
[testng] [2025-03-05 02:10:04,536] [pool-1-thread-1] Initializing /data/steve/JEOL/WinSem (Sue)/SIC2.IMG:
[testng] [2025-03-05 02:10:05,669] [pool-1-thread-3] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/015.STP:
[testng] [2025-03-05 02:10:07,185] [pool-1-thread-12] Initializing /data/steve/Oxford Instr (Yoshimasa)/80619a.top:
[testng] [2025-03-05 02:10:07,905] [pool-1-thread-2] Initializing /data/steve/JEOL/JSM (Inger Ekvell)/g11@0.IMG:
[testng] [2025-03-05 02:10:09,805] [pool-1-thread-6] Initializing /data/steve/FITS/M51.fits:
[testng] [2025-03-05 02:10:10,091] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm1.afm:
[testng] [2025-03-05 02:10:10,863] [pool-1-thread-10] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/FFT test:
[testng] [2025-03-05 02:10:13,211] [pool-1-thread-5] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA7.TFR:
[testng] [2025-03-05 02:10:13,822] [pool-1-thread-9] Initializing /data/steve/Bio-Rad (Nico Lindegger)/b.PIC:
[testng] [2025-03-05 02:10:14,693] [pool-1-thread-8] Initializing /data/steve/RHK Tech/RHK IV (Koji N)/02042603.sm2:
[testng] [2025-03-05 02:10:15,302] [pool-1-thread-7] Initializing /data/steve/JEOL/WinSem (Sue)/CONCRETE.IMG:
[testng] [2025-03-05 02:10:16,650] [pool-1-thread-3] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/1_2h2_3.img:
[testng] [2025-03-05 02:10:18,981] [pool-1-thread-11] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-nopack.HIS:
[testng] [2025-03-05 02:10:20,254] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/302.TIF:
[testng] [2025-03-05 02:10:22,220] [pool-1-thread-12] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/stm3.afm:
[testng] [2025-03-05 02:10:23,868] [pool-1-thread-4] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/TwoDots.STP:
[testng] [2025-03-05 02:10:25,772] [pool-1-thread-2] Initializing /data/steve/TopoMetrix/Topo STM (Liam McD)/GRID1.TFR:
[testng] [2025-03-05 02:10:26,424] [pool-1-thread-5] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-3.HIS:
[testng] [2025-03-05 02:10:26,975] [pool-1-thread-1] Initializing /data/steve/Philips (Markus G)/135-30.IMG:
[testng] [2025-03-05 02:10:27,469] [pool-1-thread-9] Initializing /data/steve/Gatan/Gatan (Sue D)/WOODLOUSE:
[testng] [2025-03-05 02:10:27,753] [pool-1-thread-8] Initializing /data/steve/Targa/Test.TGA:
[testng] [2025-03-05 02:10:28,244] [pool-1-thread-11] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLED.IMG:
[testng] [2025-03-05 02:10:30,867] [pool-1-thread-12] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/FGD006.TIF:
[testng] [2025-03-05 02:10:33,622] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990301c.tif:
[testng] [2025-03-05 02:10:36,344] [pool-1-thread-4] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6proj3.lsm:
[testng] [2025-03-05 02:10:37,446] [pool-1-thread-10] Initializing /data/steve/TIFF/Little owl TIFF:
[testng] [2025-03-05 02:10:39,459] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Brad Taft)/03031020.afm:
[testng] [2025-03-05 02:10:40,120] [pool-1-thread-9] Initializing /data/steve/FITS/M13.fits:
[testng] [2025-03-05 02:10:40,459] [pool-1-thread-6] Initializing /data/steve/Molecular Imaging/Mol Imag v5.0 (Lionel S)/Cu#18-NaOH-035.STP:
[testng] [2025-03-05 02:10:41,159] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Stacks/DoF test stack (Ahnelt):
[testng] [2025-03-05 02:10:43,171] [pool-1-thread-5] Initializing /data/steve/Molecular Imaging/Mol Imag v5.2 (Steve Higgins)/014.STP:
[testng] [2025-03-05 02:10:43,764] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Chromosome images/HKGmaizeMitose5.pict:
[testng] [2025-03-05 02:10:44,273] [pool-1-thread-1] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1.lsm:
[testng] [2025-03-05 02:10:45,443] [pool-1-thread-11] Initializing /data/steve/Gatan/Gatan (Patrick Burton)/PDB_DARK_25k.dm2:
[testng] [2025-03-05 02:10:46,381] [pool-1-thread-9] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 2 samples:pixel/coltubfitc1proj.lsm:
[testng] [2025-03-05 02:10:48,002] [pool-1-thread-3] Initializing /data/steve/Gatan/Gatan Mac (Guy Mayor)/Digital Micrograph 3.4:
[testng] [2025-03-05 02:10:48,533] [pool-1-thread-8] Initializing /data/steve/Gatan/Gatan TIFF/Si CHIP TIFF:
[testng] [2025-03-05 02:10:50,125] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_05.SM2:
[testng] [2025-03-05 02:10:50,860] [pool-1-thread-11] Initializing /data/steve/UBM (Rosset)/SG2.PR3:
[testng] [2025-03-05 02:10:51,385] [pool-1-thread-12] Initializing /data/steve/JEOL/WinSem (Sue)/Shuttle tile ceramic/SHUTTLEC.IMG:
[testng] [2025-03-05 02:10:52,151] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Iron map 10.dm3:
[testng] [2025-03-05 02:10:52,391] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo STM v5 (Ewald B)/c80-50zfr.tif:
[testng] [2025-03-05 02:10:53,919] [pool-1-thread-7] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/HOPG.tif:
[testng] [2025-03-05 02:10:55,432] [pool-1-thread-10] Initializing /data/steve/Hamamatsu (Keith B)/HIS-8bit.HIS:
[testng] [2025-03-05 02:10:55,924] [pool-1-thread-1] Initializing /data/steve/Hamamatsu (Keith B)/HIS-16bit-packed.HIS:
[testng] [2025-03-05 02:10:57,210] [pool-1-thread-3] Initializing /data/steve/RHK Tech/RHK (Oliver Leifeld)/SM02_08.SM2:
[testng] [2025-03-05 02:10:57,794] [pool-1-thread-2] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY 3:
[testng] [2025-03-05 02:10:58,462] [pool-1-thread-5] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm2.afm:
[testng] [2025-03-05 02:10:59,021] [pool-1-thread-4] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo07.sm2:
[testng] [2025-03-05 02:10:59,512] [pool-1-thread-9] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Demo04.sm2:
[testng] [2025-03-05 02:11:00,001] [pool-1-thread-11] Initializing /data/steve/RHK Tech/RHK (Mark Flowers)/Silicon.sm2:
[testng] [2025-03-05 02:11:02,078] [pool-1-thread-2] Initializing /data/steve/SBIG/M81 M 40s:
[testng] [2025-03-05 02:11:04,690] [pool-1-thread-12] Initializing /data/steve/Gatan/Gatan (Sue D)/THE FLY A:
[testng] [2025-03-05 02:11:05,088] [pool-1-thread-8] Initializing /data/steve/Unisoku (Takashi)/Sample.HDR:
[testng] [2025-03-05 02:11:06,275] [pool-1-thread-10] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/JEOL3.tif:
[testng] [2025-03-05 02:11:08,830] [pool-1-thread-1] Initializing /data/steve/JPK Instr (Christian L)/Virus.jpk:
[testng] [2025-03-05 02:11:09,930] [pool-1-thread-3] Initializing /data/steve/Philips (Markus G)/135-32.IMG:
[testng] [2025-03-05 02:11:11,300] [pool-1-thread-6] Initializing /data/steve/TopoMetrix/Topo SFM (SC)/PA2.TFR:
[testng] [2025-03-05 02:11:13,037] [pool-1-thread-5] Initializing /data/steve/Zeiss LSM/Zeiss LSM (John S)/Zeiss LSM 1 sample:pixel/ug6stack3.lsm:
[testng] [2025-03-05 02:11:14,153] [pool-1-thread-4] Initializing /data/steve/Gatan/Gatan (Sue D)/SEM 500X (Larry):
[testng] [2025-03-05 02:11:14,600] [pool-1-thread-9] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDR2-1.2FL:
[testng] [2025-03-05 02:11:15,422] [pool-1-thread-11] Initializing /data/steve/Seiko Instr (Hwansoo)/05808002.xqf:
[testng] [2025-03-05 02:11:16,289] [pool-1-thread-7] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/car-mac-con-g_003.STP:
[testng] [2025-03-05 02:11:18,411] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK STS (Peter Sloan)/B50303AS.SM2:
[testng] [2025-03-05 02:11:20,379] [pool-1-thread-3] Initializing /data/steve/JEOL/SPM (Masashi N)/AFM204.TIF:
[testng] [2025-03-05 02:11:23,235] [pool-1-thread-1] Initializing /data/steve/FITS/M104.fits:
[testng] [2025-03-05 02:11:23,654] [pool-1-thread-6] Initializing /data/steve/Misc SXM test images/Chromosome images/Chironomus2.pict:
[testng] [2025-03-05 02:11:24,759] [pool-1-thread-2] Initializing /data/steve/Burleigh/Burleigh v2/Burleigh v2 (Phil W)/0_h4_4.img:
[testng] [2025-03-05 02:11:27,964] [pool-1-thread-4] Initializing /data/steve/Quesant Instr/Quesant v2.0 (Hal E)/2-18-05A.afm:
[testng] [2025-03-05 02:11:28,764] [pool-1-thread-9] Initializing /data/steve/FITS/Meade DSI/M31bG1.fts:
[testng] [2025-03-05 02:11:29,000] [pool-1-thread-5] Initializing /data/steve/Gatan/Gatan TIFF/BALL TIFF:
[testng] [2025-03-05 02:11:31,974] [pool-1-thread-10] Initializing /data/steve/JPK Instr (Christian L)/Anti-reflex-coating.jpk:
[testng] [2025-03-05 02:11:33,495] [pool-1-thread-11] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-2.xqd:
[testng] [2025-03-05 02:11:34,321] [pool-1-thread-7] Initializing /data/steve/TIFF/8MAR03A.TIFF:
[testng] [2025-03-05 02:11:37,049] [pool-1-thread-1] Initializing /data/steve/JEOL/SPM (Masashi N)/FFM204.TIF:
[testng] [2025-03-05 02:11:39,544] [pool-1-thread-8] Initializing /data/steve/Leica TCS (Keith B)/25_5BJ.SXM:
[testng] [2025-03-05 02:11:41,594] [pool-1-thread-12] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001.xqd:
[testng] [2025-03-05 02:11:42,394] [pool-1-thread-6] Initializing /data/steve/Hamamatsu (Keith B)/HIS-12bit-2b.HIS:
[testng] [2025-03-05 02:11:44,147] [pool-1-thread-9] Initializing /data/steve/JEOL/SPM (Hiroyuki Isobe)/990304j.tif:
[testng] [2025-03-05 02:11:47,759] [pool-1-thread-4] Initializing /data/steve/TIFF/ta269 TIFF:
[testng] [2025-03-05 02:11:50,963] [pool-1-thread-11] Initializing /data/steve/Molecular Imaging/Mol Imag v4.18 (Reinat)/npc-liq-sharO_003.STP:
[testng] [2025-03-05 02:11:52,008] [pool-1-thread-3] Initializing /data/steve/TIFF/HAFF SEM:
[testng] [2025-03-05 02:11:55,044] [pool-1-thread-2] Initializing /data/steve/TIFF/Macrophage cell images/T08-08 1600 24-bit.tif:
[testng] [2025-03-05 02:11:57,967] [pool-1-thread-10] Initializing /data/steve/Philips (Markus G)/135-31.IMG:
[testng] [2025-03-05 02:11:59,384] [pool-1-thread-6] Initializing /data/steve/JEOL/WinSem (Sue)/RICK1.IMG:
[testng] [2025-03-05 02:12:01,635] [pool-1-thread-12] Initializing /data/steve/TIFF/Macrophage cell images/RT1-f-24 1600 24-bit.tif:
[testng] [2025-03-05 02:12:04,608] [pool-1-thread-7] Initializing /data/steve/Gatan/Gatan PC (Eric Leroy)/Oxygen map 1.dm3:
[testng] [2025-03-05 02:12:05,011] [pool-1-thread-5] Initializing /data/steve/Seiko Instr (Hwansoo)/05808001-3.xqd:
[testng] [2025-03-05 02:12:05,911] [pool-1-thread-1] Initializing /data/steve/Philips (Markus G)/302.IMG:
[testng] [2025-03-05 02:12:07,639] [pool-1-thread-11] Initializing /data/steve/SM-Camera/W(110)+Fe,5nA,30min@110eV:
[testng] [2025-03-05 02:12:10,883] [pool-1-thread-10] Initializing /data/steve/JEOL/WinSem (Sue)/BALLS.IMG:
[testng] [2025-03-05 02:12:13,024] [pool-1-thread-7] Initializing /data/steve/Misc SXM test images/Hough transform/Dale's bubbles:
[testng] [2025-03-05 02:12:15,876] [pool-1-thread-8] Initializing /data/steve/Misc SXM test images/Stacks/Fred's stack:
[testng] [2025-03-05 02:12:18,202] [pool-1-thread-4] Initializing /data/steve/Leica TCS (Keith B)/25_5BB.SXM:
[testng] [2025-03-05 02:12:19,799] [pool-1-thread-9] Initializing /data/steve/TIFF/Macrophage cell images/D1-A-1 1392 36-bit.tif:
[testng] [2025-03-05 02:12:20,719] [pool-1-thread-6] Initializing /data/steve/Philips (Markus G)/135-33.IMG:
[testng] [2025-03-05 02:12:21,201] [pool-1-thread-1] Initializing /data/steve/VG SAM (Karen)/PEAK.DTI:
[testng] [2025-03-05 02:12:21,664] [pool-1-thread-2] Initializing /data/steve/Misc SXM test images/Fake STM/Fake STM (4 rpts) TIFF:
[testng] [2025-03-05 02:12:23,427] [pool-1-thread-5] Initializing /data/steve/RHK Tech/RHK (Bob Baker)/Examp_04.SM2:
[testng] [2025-03-05 02:12:23,915] [pool-1-thread-3] Initializing /data/steve/Quesant Instr/Quesant v1.2 (Marc F)/afm3.afm:
[testng] [2025-03-05 02:12:28,803] [pool-1-thread-1] Initializing /data/steve/TopoMetrix/Topo MFM (SC)/NDPOL-01.TFR:
[testng] [2025-03-05 02:12:29,452] [pool-1-thread-10] Initializing /data/steve/Zeiss LSM/Zeiss LSM (Ewald B)/NIALDIAN.TIF:
[testng] [2025-03-05 02:12:31,644] [pool-1-thread-5] Initializing /data/steve/Misc SXM test images/Chromosome images/HRhuman1.pict:
[testng] [2025-03-05 02:12:32,195] [pool-1-thread-6] Initializing /data/steve/Burleigh/Burleigh v2/Graphite:
[testng] [2025-03-05 02:12:34,941] [pool-1-thread-3] Initializing /data/steve/Bio-Rad (Nico Lindegger)/a.PIC:
[testng] [2025-03-05 02:12:35,781] [pool-1-thread-12] Initializing /data/steve/RHK Tech/RHK-XPM Pro (Lydie L)/B70417000Q.SM3:
[testng] [2025-03-05 02:12:36,484] [pool-1-thread-11] Initializing /data/steve/Oxford Instr (Yoshimasa)/98042103.top:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 8480, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 14 minutes 59 seconds
Finished: SUCCESS