Started by upstream project "BIOFORMATS-test-repo" build number 366
originally caused by:
Started by upstream project "Trigger" build number 392
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins17536331164091988175.sh
+ '[' metamorph = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58378_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:54:22,620 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 01:54:22,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service.
[testng] 01:54:22,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:54:22,623 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:54:22,623 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:54:22,623 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:54:22,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:54:22,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:54:22,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:54:22,624 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:54:22,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:54:22,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:54:22,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:54:22,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:54:22,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:54:22,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:54:22,817 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:54:22,817 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:54:22,817 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:54:22,818 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:54:22,818 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@47d9a273 - End of configuration.
[testng] 01:54:22,819 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4659191b - Registering current configuration as safe fallback point
[testng] 01:54:22,819 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-06 01:54:22,828] [main] java.version = 21
[testng] 01:54:22,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:54:22,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:54:22,871 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-06_01-54-22.log]
[testng] 01:54:22,873 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration.
[testng] [2025-03-06 01:54:22,875] [main] testng.directory = /data
[testng] [2025-03-06 01:54:22,875] [main] testng.configDirectory = /config
[testng] [2025-03-06 01:54:22,884] [main] testng.multiplier = 1.0
[testng] [2025-03-06 01:54:22,885] [main] testng.in-memory = false
[testng] [2025-03-06 01:54:22,885] [main] testng.allow-missing = false
[testng] [2025-03-06 01:54:22,885] [main] user.language = en
[testng] [2025-03-06 01:54:22,885] [main] user.country = ${user.country}
[testng] [2025-03-06 01:54:22,885] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-06 02:11:13,375] [main] ----------------------------------------
[testng] [2025-03-06 02:11:13,376] [main] Total files: 14121
[testng] [2025-03-06 02:11:13,376] [main] Scan time: 1010.49 s (71 ms/file)
[testng] [2025-03-06 02:11:13,376] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 261 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-06 02:39:06,796] [pool-1-thread-1] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk:
[testng] 02:39:06,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:39:06,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:06,799 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-06_02-39-06.log]
[testng] 02:39:06,799 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a52c4c4 - End of configuration.
[testng] [2025-03-06 02:39:08,739] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] 02:39:08,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:39:08,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:08,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-06_02-39-08.log]
[testng] 02:39:08,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f86b77b - End of configuration.
[testng] [2025-03-06 02:39:13,956] [pool-1-thread-11] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF:
[testng] 02:39:13,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:39:13,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:13,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-06_02-39-13.log]
[testng] 02:39:13,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c5aa5b5 - End of configuration.
[testng] [2025-03-06 02:39:15,813] [pool-1-thread-10] Initializing /data/heiko/sample_3x3.stk:
[testng] 02:39:15,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:39:15,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:15,814 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-06_02-39-15.log]
[testng] 02:39:15,814 |-INFO in ch.qos.logback.core.sift.SiftProcessor@482cfb15 - End of configuration.
[testng] [2025-03-06 02:39:17,274] [pool-1-thread-9] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk:
[testng] 02:39:17,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:39:17,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:17,275 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-06_02-39-17.log]
[testng] 02:39:17,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d67e41a - End of configuration.
[testng] [2025-03-06 02:39:20,724] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF:
[testng] 02:39:20,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:39:20,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:20,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-06_02-39-20.log]
[testng] 02:39:20,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b09f096 - End of configuration.
[testng] [2025-03-06 02:39:22,445] [pool-1-thread-8] Used files list does not include base file
[testng] [2025-03-06 02:39:22,447] [pool-1-thread-7] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK:
[testng] 02:39:22,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:39:22,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:22,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-06_02-39-22.log]
[testng] 02:39:22,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44465a1e - End of configuration.
[testng] [2025-03-06 02:39:25,015] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF:
[testng] 02:39:25,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:39:25,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:25,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-06_02-39-25.log]
[testng] 02:39:25,017 |-INFO in ch.qos.logback.core.sift.SiftProcessor@501ba285 - End of configuration.
[testng] [2025-03-06 02:39:27,563] [pool-1-thread-6] Used files list does not include base file
[testng] [2025-03-06 02:39:27,565] [pool-1-thread-5] Initializing /data/chris/Stream-2(partial).stk:
[testng] 02:39:27,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:39:27,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:27,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-06_02-39-27.log]
[testng] 02:39:27,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22a2ef8 - End of configuration.
[testng] [2025-03-06 02:39:32,075] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg:
[testng] 02:39:32,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:39:32,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:32,076 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-06_02-39-32.log]
[testng] 02:39:32,077 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e0bc6a2 - End of configuration.
[testng] [2025-03-06 02:39:32,430] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg:
[testng] 02:39:32,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:39:32,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:32,431 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-06_02-39-32.log]
[testng] 02:39:32,431 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777f0ff3 - End of configuration.
[testng] [2025-03-06 02:39:32,730] [pool-1-thread-2] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF:
[testng] 02:39:32,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:39:32,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:39:32,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-06_02-39-32.log]
[testng] 02:39:32,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e7f1a80 - End of configuration.
[testng] [2025-03-06 02:39:42,535] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish7_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 02:39:57,609] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif:
[testng] [2025-03-06 02:40:01,886] [pool-1-thread-1] Initializing /data/josh/2101to400bstk.stk:
[testng] [2025-03-06 02:40:52,703] [pool-1-thread-10] Initializing /data/heiko/metadata_3x3.jpg:
[testng] [2025-03-06 02:40:57,959] [pool-1-thread-2] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-06 02:41:00,233] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif:
[testng] [2025-03-06 02:41:02,629] [pool-1-thread-4] Initializing /data/qa-16915/m-02-488.ome.tif:
[testng] [2025-03-06 02:41:12,983] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-06 02:41:20,229] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 02:41:30,293] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF:
[testng] [2025-03-06 02:41:32,627] [pool-1-thread-10] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif:
[testng] [2025-03-06 02:41:47,450] [pool-1-thread-4] Initializing /data/ascb/monopolar mt aim.tif:
[testng] [2025-03-06 02:41:49,447] [pool-1-thread-10] Initializing /data/ascb/mt prc1 kif4 2.tif:
[testng] [2025-03-06 02:41:51,864] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 02:41:59,333] [pool-1-thread-8] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF:
[testng] [2025-03-06 02:42:10,422] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF:
[testng] [2025-03-06 02:42:17,999] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF:
[testng] [2025-03-06 02:42:20,467] [pool-1-thread-10] Used files list does not include base file
[testng] [2025-03-06 02:42:20,468] [pool-1-thread-4] Initializing /data/samples/single-series-test/test_w1.TIF:
[testng] [2025-03-06 02:42:27,284] [pool-1-thread-2] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF:
[testng] [2025-03-06 02:42:34,343] [pool-1-thread-8] Initializing /data/jerome/deconv.STK:
[testng] [2025-03-06 02:42:42,706] [pool-1-thread-4] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF:
[testng] [2025-03-06 02:42:51,396] [pool-1-thread-8] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK:
[testng] [2025-03-06 02:43:00,768] [pool-1-thread-2] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif:
[testng] [2025-03-06 02:43:08,660] [pool-1-thread-8] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK:
[testng] [2025-03-06 02:43:17,785] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk:
[testng] [2025-03-06 02:43:31,550] [pool-1-thread-2] Initializing /data/josh/2101to600f.stk:
[testng] [2025-03-06 02:44:03,937] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 02:44:10,351] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF:
[testng] [2025-03-06 02:44:15,734] [pool-1-thread-8] Initializing /data/ascb/mt aim.tif:
[testng] [2025-03-06 02:44:27,591] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF:
[testng] [2025-03-06 02:44:31,020] [pool-1-thread-7] Used files list does not include base file
[testng] [2025-03-06 02:44:33,729] [pool-1-thread-8] Initializing /data/ascb/golgi marker.tif:
[testng] [2025-03-06 02:44:45,142] [pool-1-thread-4] Initializing /data/samples/10xcalib.tif:
[testng] [2025-03-06 02:44:50,462] [pool-1-thread-8] Initializing /data/samples/test-plate/test_s10_t1.tif:
[testng] [2025-03-06 02:45:17,134] [pool-1-thread-4] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF:
[testng] [2025-03-06 02:46:21,271] [pool-1-thread-7] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF:
[testng] [2025-03-06 02:46:35,372] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish8_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 02:46:52,093] [pool-1-thread-1] Initializing /data/grant/XYZ_Image.STK:
[testng] [2025-03-06 02:47:14,682] [pool-1-thread-1] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk:
[testng] [2025-03-06 02:47:18,790] [pool-1-thread-2] Initializing /data/samples/zserEight.stk:
[testng] [2025-03-06 02:47:34,132] [pool-1-thread-1] Initializing /data/ascb/golgi marker 2.tif:
[testng] [2025-03-06 02:47:36,778] [pool-1-thread-2] Initializing /data/josh/EditedMovies/2101to600a.stk:
[testng] [2025-03-06 02:48:16,595] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 02:50:39,052] [pool-1-thread-12] Initializing /data/ascb/C9 Stack.tif:
[testng] [2025-03-06 02:50:55,275] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF:
[testng] [2025-03-06 02:50:58,735] [pool-1-thread-12] Used files list does not include base file
[testng] [2025-03-06 02:50:58,908] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 02:52:17,568] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF:
[testng] [2025-03-06 02:52:19,621] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish4_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 02:52:47,120] [pool-1-thread-5] Initializing /data/qa-16915/m-01-561.ome.tif:
[testng] [2025-03-06 02:52:48,568] [pool-1-thread-12] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF:
[testng] [2025-03-06 02:52:53,949] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 02:53:04,240] [pool-1-thread-5] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk:
[testng] [2025-03-06 02:53:18,043] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk:
[testng] [2025-03-06 02:54:08,031] [pool-1-thread-12] Initializing /data/benedikt/LosslessCompressedSTK.stk:
[testng] [2025-03-06 02:54:27,121] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 02:54:54,372] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-06 02:54:59,211] [pool-1-thread-10] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk:
[testng] [2025-03-06 02:55:14,048] [pool-1-thread-12] Initializing /data/ascb/RNA dye MT 2.tif:
[testng] [2025-03-06 02:55:17,915] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif:
[testng] [2025-03-06 02:55:20,441] [pool-1-thread-10] Used files list does not include base file
[testng] [2025-03-06 02:55:33,581] [pool-1-thread-12] Initializing /data/ascb/mt mklp1.tif:
[testng] [2025-03-06 02:55:48,303] [pool-1-thread-12] Initializing /data/qa-16887/m-01.tif:
[testng] [2025-03-06 02:55:53,128] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 02:55:59,717] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 02:56:30,553] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 02:57:09,787] [pool-1-thread-12] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF:
[testng] [2025-03-06 02:57:36,088] [pool-1-thread-12] Initializing /data/aaron/metamorph.stk:
[testng] [2025-03-06 02:57:49,691] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 02:59:28,576] [pool-1-thread-1] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF:
[testng] [2025-03-06 02:59:32,450] [pool-1-thread-1] Used files list does not include base file
[testng] [2025-03-06 03:01:20,440] [pool-1-thread-1] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif:
[testng] [2025-03-06 03:01:36,339] [pool-1-thread-1] Initializing /data/ascb/mt racgap1 dna.tif:
[testng] [2025-03-06 03:01:49,300] [pool-1-thread-1] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF:
[testng] [2025-03-06 03:01:59,952] [pool-1-thread-2] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif:
[testng] [2025-03-06 03:02:14,042] [pool-1-thread-2] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk:
[testng] [2025-03-06 03:03:18,751] [pool-1-thread-2] Initializing /data/thomas/test.tif:
[testng] [2025-03-06 03:03:33,030] [pool-1-thread-2] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif:
[testng] [2025-03-06 03:04:28,493] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:05:27,656] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF:
[testng] [2025-03-06 03:05:31,068] [pool-1-thread-5] Used files list does not include base file
[testng] [2025-03-06 03:06:59,165] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR5_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:07:24,623] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:08:36,582] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:10:23,626] [pool-1-thread-4] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK:
[testng] [2025-03-06 03:11:02,065] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:12:01,790] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF:
[testng] [2025-03-06 03:12:16,739] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF:
[testng] [2025-03-06 03:12:35,876] [pool-1-thread-1] Initializing /data/samples/zseries.stk:
[testng] [2025-03-06 03:12:50,886] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish5_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:14:42,014] [pool-1-thread-6] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF:
[testng] [2025-03-06 03:15:15,002] [pool-1-thread-6] Initializing /data/josh/2101to600e.stk:
[testng] [2025-03-06 03:16:52,220] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish10_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:18:02,989] [pool-1-thread-5] Initializing /data/josh/EditedMovies/2101to400b.stk:
[testng] [2025-03-06 03:21:12,486] [pool-1-thread-5] Initializing /data/josh/EditedMovies/2101to600e.stk:
[testng] [2025-03-06 03:21:38,149] [pool-1-thread-4] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk:
[testng] [2025-03-06 03:22:15,847] [pool-1-thread-5] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF:
[testng] [2025-03-06 03:22:41,325] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif:
[testng] [2025-03-06 03:22:53,407] [pool-1-thread-4] Initializing /data/thomas/t_test2001.tif:
[testng] [2025-03-06 03:23:06,783] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:25:37,237] [pool-1-thread-3] Initializing /data/heiko/sample_2x2.stk:
[testng] [2025-03-06 03:25:50,333] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif:
[testng] [2025-03-06 03:26:04,462] [pool-1-thread-3] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF:
[testng] [2025-03-06 03:26:36,158] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to600b.stk:
[testng] [2025-03-06 03:28:11,694] [pool-1-thread-3] Initializing /data/cumol-test-series/23.001:
[testng] [2025-03-06 03:29:29,277] [pool-1-thread-3] Initializing /data/chris/test2_w2_s1_t1.stk:
[testng] [2025-03-06 03:29:41,767] [pool-1-thread-3] Initializing /data/grant/X.STK:
[testng] [2025-03-06 03:30:03,156] [pool-1-thread-3] Initializing /data/qa-16915/m-04-561.tif:
[testng] [2025-03-06 03:30:17,565] [pool-1-thread-3] Initializing /data/alex/Selected FITC.stk:
[testng] [2025-03-06 03:30:29,854] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF:
[testng] [2025-03-06 03:30:51,151] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk:
[testng] [2025-03-06 03:32:14,171] [pool-1-thread-7] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif:
[testng] [2025-03-06 03:32:27,937] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif:
[testng] [2025-03-06 03:32:43,340] [pool-1-thread-7] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF:
[testng] [2025-03-06 03:33:20,557] [pool-1-thread-4] Initializing /data/qa-16915/m-04.tif:
[testng] [2025-03-06 03:33:36,980] [pool-1-thread-4] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF:
[testng] [2025-03-06 03:34:10,043] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:35:05,538] [pool-1-thread-3] Initializing /data/doil/001-23 dapi.stk:
[testng] [2025-03-06 03:37:18,386] [pool-1-thread-3] Initializing /data/qa-16915/m-02.tif:
[testng] [2025-03-06 03:37:31,867] [pool-1-thread-7] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif:
[testng] [2025-03-06 03:37:33,887] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish4_w1FRET_t1.TIF:
[testng] [2025-03-06 03:37:38,987] [pool-1-thread-11] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk:
[testng] [2025-03-06 03:37:49,785] [pool-1-thread-7] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK:
[testng] [2025-03-06 03:38:55,887] [pool-1-thread-11] Initializing /data/qa-16915/m-02-561.ome.tif:
[testng] [2025-03-06 03:39:08,632] [pool-1-thread-11] Initializing /data/jcb/201008090/Color Combine.stk:
[testng] [2025-03-06 03:39:13,237] [pool-1-thread-1] Initializing /data/dave/Z Series.stk:
[testng] [2025-03-06 03:39:24,210] [pool-1-thread-11] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF:
[testng] [2025-03-06 03:39:26,627] [pool-1-thread-1] Initializing /data/ascb/mt prc1 kif4 1.tif:
[testng] [2025-03-06 03:39:39,336] [pool-1-thread-1] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:39:46,666] [pool-1-thread-11] Initializing /data/qa-16915/m-01-488.ome.tif:
[testng] [2025-03-06 03:39:57,970] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:40:11,225] [pool-1-thread-1] Initializing /data/qa-31304/Well _C6_1.tif:
[testng] [2025-03-06 03:40:24,044] [pool-1-thread-1] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif:
[testng] [2025-03-06 03:40:35,387] [pool-1-thread-1] Initializing /data/stephane/Lame7-E5-Y+-001.stk:
[testng] [2025-03-06 03:40:43,859] [pool-1-thread-9] Initializing /data/graham/G_Wright raw.stk:
[testng] [2025-03-06 03:40:48,105] [pool-1-thread-1] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif:
[testng] [2025-03-06 03:40:53,791] [pool-1-thread-9] Initializing /data/samples/zser24.stk:
[testng] [2025-03-06 03:41:00,230] [pool-1-thread-1] Initializing /data/josh/2101to800.stk:
[testng] [2025-03-06 03:41:13,276] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:42:16,160] [pool-1-thread-1] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF:
[testng] [2025-03-06 03:43:14,255] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:45:47,491] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1B_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:46:10,609] [pool-1-thread-3] Initializing /data/pang/z-stack/Z Series.tif:
[testng] [2025-03-06 03:46:21,881] [pool-1-thread-3] Initializing /data/qa-16915/m-01.tif:
[testng] [2025-03-06 03:46:35,781] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:47:50,538] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:48:16,430] [pool-1-thread-11] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK:
[testng] [2025-03-06 03:48:40,942] [pool-1-thread-11] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF:
[testng] [2025-03-06 03:48:42,910] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif:
[testng] [2025-03-06 03:48:55,737] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish9_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:49:10,596] [pool-1-thread-10] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF:
[testng] [2025-03-06 03:49:12,099] [pool-1-thread-11] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF:
[testng] [2025-03-06 03:49:28,546] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:49:43,732] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:50:42,504] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:50:58,977] [pool-1-thread-11] Initializing /data/josh/EditedMovies/2101to800.stk:
[testng] [2025-03-06 03:51:10,738] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif:
[testng] [2025-03-06 03:51:24,744] [pool-1-thread-4] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:51:45,019] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish1(ISO200nM)_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 03:51:58,540] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif:
[testng] [2025-03-06 03:52:00,036] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-06 03:52:16,058] [pool-1-thread-4] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF:
[testng] [2025-03-06 03:52:25,480] [pool-1-thread-4] Initializing /data/david/tl4.tif:
[testng] [2025-03-06 03:52:39,944] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif:
[testng] [2025-03-06 03:52:48,701] [pool-1-thread-4] Initializing /data/ascb/RNA dye MT.tif:
[testng] [2025-03-06 03:52:57,078] [pool-1-thread-4] Initializing /data/josh/2101to600b.stk:
[testng] [2025-03-06 03:53:32,677] [pool-1-thread-3] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK:
[testng] [2025-03-06 03:53:40,652] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF:
[testng] [2025-03-06 03:53:49,328] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg:
[testng] [2025-03-06 03:53:52,790] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk:
[testng] [2025-03-06 03:54:08,379] [pool-1-thread-3] Initializing /data/josh/2101to600astk.stk:
[testng] [2025-03-06 03:54:48,138] [pool-1-thread-4] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK:
[testng] [2025-03-06 03:54:59,369] [pool-1-thread-4] Initializing /data/grant/XYZC_Image_w1FITC.STK:
[testng] [2025-03-06 03:55:24,419] [pool-1-thread-4] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk:
[testng] [2025-03-06 03:55:29,688] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF:
[testng] [2025-03-06 03:55:32,607] [pool-1-thread-6] Used files list does not include base file
[testng] [2025-03-06 03:55:38,849] [pool-1-thread-4] Initializing /data/ascb/mt prc1 kif4.tif:
[testng] [2025-03-06 03:55:50,153] [pool-1-thread-4] Initializing /data/graham/G_Wright deconvolved.stk:
[testng] [2025-03-06 03:56:00,764] [pool-1-thread-4] Initializing /data/ascb/C1 Stack.stk:
[testng] [2025-03-06 03:56:13,971] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk:
[testng] [2025-03-06 03:56:16,448] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-06 03:56:37,459] [pool-1-thread-10] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF:
[testng] [2025-03-06 03:56:56,802] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-06 03:57:01,930] [pool-1-thread-10] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF:
[testng] [2025-03-06 03:57:05,924] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:57:11,097] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:57:28,360] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif:
[testng] [2025-03-06 03:57:33,129] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:57:37,775] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:57:47,583] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-06 03:57:52,725] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 03:58:19,755] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 03:59:39,854] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish6_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:00:10,665] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF:
[testng] [2025-03-06 04:00:21,781] [pool-1-thread-3] Initializing /data/chris/exp1_w1_s1_t1.tif:
[testng] [2025-03-06 04:00:34,197] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4 3.tif:
[testng] [2025-03-06 04:00:46,719] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-06 04:05:47,618] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:06:24,625] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF:
[testng] [2025-03-06 04:06:27,338] [pool-1-thread-6] Used files list does not include base file
[testng] [2025-03-06 04:06:39,380] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-06 04:07:04,206] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-06 04:07:20,196] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:07:54,469] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish5_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:09:18,367] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif:
[testng] [2025-03-06 04:09:19,801] [pool-1-thread-3] Used files list does not include base file
[testng] [2025-03-06 04:09:39,029] [pool-1-thread-3] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF:
[testng] [2025-03-06 04:10:13,723] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 04:13:57,828] [pool-1-thread-5] Initializing /data/jae/RGB_s34.tif:
[testng] [2025-03-06 04:14:14,280] [pool-1-thread-5] Initializing /data/josh/2101to400astk.stk:
[testng] [2025-03-06 04:15:01,853] [pool-1-thread-4] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-06 04:16:15,495] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:17:53,414] [pool-1-thread-3] Initializing /data/qa-30870/220209_posit5.tif:
[testng] [2025-03-06 04:18:05,140] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 04:18:36,874] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 04:19:45,958] [pool-1-thread-4] Initializing /data/grant/Scale_bar_100um_XY_image.TIF:
[testng] [2025-03-06 04:20:06,420] [pool-1-thread-4] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF:
[testng] [2025-03-06 04:20:09,637] [pool-1-thread-7] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 04:20:45,660] [pool-1-thread-7] Initializing /data/steve/Experiment2.stk:
[testng] [2025-03-06 04:20:57,882] [pool-1-thread-7] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk:
[testng] [2025-03-06 04:21:32,571] [pool-1-thread-2] Initializing /data/samples/10xcalib.stk:
[testng] [2025-03-06 04:21:34,237] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF:
[testng] [2025-03-06 04:21:38,038] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif:
[testng] [2025-03-06 04:21:47,622] [pool-1-thread-2] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk:
[testng] [2025-03-06 04:21:50,822] [pool-1-thread-7] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk:
[testng] [2025-03-06 04:21:55,334] [pool-1-thread-4] Initializing /data/samples/diatoms3d.stk:
[testng] [2025-03-06 04:22:04,054] [pool-1-thread-2] Initializing /data/chris/test2_w2_s1_t2.stk:
[testng] [2025-03-06 04:22:10,858] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF:
[testng] [2025-03-06 04:22:13,698] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-06 04:22:19,322] [pool-1-thread-2] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF:
[testng] [2025-03-06 04:22:32,703] [pool-1-thread-7] Initializing /data/qa-17827/G28P2E10-2 x5.TIF:
[testng] [2025-03-06 04:22:46,307] [pool-1-thread-7] Initializing /data/qa-16915/m-04-488.tif:
[testng] [2025-03-06 04:22:52,338] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish4_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:23:13,818] [pool-1-thread-7] Initializing /data/josh/EditedMovies/2101to600f.stk:
[testng] [2025-03-06 04:24:03,745] [pool-1-thread-4] Initializing /data/samples/zserSixteen.stk:
[testng] [2025-03-06 04:24:05,530] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-06 04:24:14,359] [pool-1-thread-4] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk:
[testng] [2025-03-06 04:24:23,476] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif:
[testng] [2025-03-06 04:24:25,522] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-06 04:24:32,415] [pool-1-thread-9] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif:
[testng] [2025-03-06 04:24:37,467] [pool-1-thread-7] Initializing /data/steve/Experiment2.tif:
[testng] [2025-03-06 04:24:43,413] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif:
[testng] [2025-03-06 04:24:45,888] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1A_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:25:01,071] [pool-1-thread-7] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF:
[testng] [2025-03-06 04:25:07,066] [pool-1-thread-9] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk:
[testng] [2025-03-06 04:25:16,550] [pool-1-thread-9] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif:
[testng] [2025-03-06 04:25:29,485] [pool-1-thread-9] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF:
[testng] [2025-03-06 04:25:31,614] [pool-1-thread-9] Used files list does not include base file
[testng] [2025-03-06 04:25:36,072] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 04:26:41,243] [pool-1-thread-9] Initializing /data/josh/EditedMovies/2101to400a.stk:
[testng] [2025-03-06 04:26:50,788] [pool-1-thread-11] Initializing /data/jacek/YFP2trans.tif:
[testng] [2025-03-06 04:27:01,470] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif:
[testng] [2025-03-06 04:27:11,527] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-06 04:27:17,463] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF:
[testng] [2025-03-06 04:27:26,861] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif:
[testng] [2025-03-06 04:27:35,857] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF:
[testng] [2025-03-06 04:27:41,564] [pool-1-thread-9] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF:
[testng] [2025-03-06 04:27:43,696] [pool-1-thread-9] Used files list does not include base file
[testng] [2025-03-06 04:27:47,450] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF:
[testng] [2025-03-06 04:28:52,524] [pool-1-thread-9] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk:
[testng] [2025-03-06 04:31:20,996] [pool-1-thread-9] Initializing /data/jayne/2celltest10fpstl65power.stk:
[testng] [2025-03-06 04:31:32,098] [pool-1-thread-9] Initializing /data/qa-16907/1_w1Single SPI 405.TIF:
[testng] [2025-03-06 04:31:50,930] [pool-1-thread-9] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK:
[testng] 07:16:13,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 07:16:13,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:16:13,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-06_07-16-13.log]
[testng] 07:16:13,016 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4eb0492e - End of configuration.
[testng] 07:18:52,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 07:18:52,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:18:52,665 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-06_07-18-52.log]
[testng] 07:18:52,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18ca99a4 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 13833, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 324 minutes 33 seconds
Finished: SUCCESS