Started by upstream project "BIOFORMATS-test-repo" build number 41
originally caused by:
Started by upstream project "Trigger" build number 47
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins7249538064052070569.sh
+ '[' zeiss-zvi = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_5866_merge_ci -v /uod/idr/repos/curated/zeiss-zvi:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-zvi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 02:47:51,316 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 02:47:51,318 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 02:47:51,318 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:47:51,319 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 02:47:51,319 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 02:47:51,320 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 02:47:51,320 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 02:47:51,320 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:47:51,320 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 02:47:51,321 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 02:47:51,321 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 02:47:51,321 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 02:47:51,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 02:47:51,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 02:47:51,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 02:47:51,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 02:47:51,608 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 02:47:51,609 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 02:47:51,609 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 02:47:51,609 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 02:47:51,609 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 02:47:51,610 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 02:47:51,610 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 290 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-04-22 02:47:51,621] [main] java.version = 1.8.0_342
[testng] 02:47:51,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 02:47:51,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:47:51,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-22_02-47-51.log]
[testng] 02:47:51,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-04-22 02:47:51,683] [main] testng.directory = /data
[testng] [2024-04-22 02:47:51,683] [main] testng.configDirectory = /config
[testng] [2024-04-22 02:47:51,696] [main] testng.multiplier = 1.0
[testng] [2024-04-22 02:47:51,696] [main] testng.in-memory = false
[testng] [2024-04-22 02:47:51,696] [main] testng.allow-missing = false
[testng] [2024-04-22 02:47:51,697] [main] user.language = fr
[testng] [2024-04-22 02:47:51,697] [main] user.country = FR
[testng] [2024-04-22 02:47:51,697] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-04-22 02:47:54,951] [main] ----------------------------------------
[testng] [2024-04-22 02:47:54,951] [main] Total files: 157
[testng] [2024-04-22 02:47:54,951] [main] Scan time: 3.254 s (20 ms/file)
[testng] [2024-04-22 02:47:54,951] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 150 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-04-22 02:54:12,681] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_19.zvi:
[testng] 02:54:12,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:54:12,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:12,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-22_02-54-12.log]
[testng] 02:54:12,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c0441bf - End of configuration.
[testng] [2024-04-22 02:54:18,580] [pool-1-thread-12] Initializing /data/sebastien/F1.zvi:
[testng] 02:54:18,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:54:18,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:18,582 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-22_02-54-18.log]
[testng] 02:54:18,582 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64806345 - End of configuration.
[testng] [2024-04-22 02:54:19,140] [pool-1-thread-11] Initializing /data/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.zvi:
[testng] 02:54:19,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:54:19,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:19,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-22_02-54-19.log]
[testng] 02:54:19,142 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12babe45 - End of configuration.
[testng] [2024-04-22 02:54:20,108] [pool-1-thread-10] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif:
[testng] 02:54:20,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:54:20,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:20,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-22_02-54-20.log]
[testng] 02:54:20,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@672d7144 - End of configuration.
[testng] [2024-04-22 02:54:20,197] [pool-1-thread-9] Initializing /data/susan/BY4741NQ2.zvi:
[testng] 02:54:20,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:54:20,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:20,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-22_02-54-20.log]
[testng] 02:54:20,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f73e88 - End of configuration.
[testng] [2024-04-22 02:54:20,251] [pool-1-thread-8] Initializing /data/othmar/z-stack.zvi:
[testng] 02:54:20,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:54:20,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:20,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-22_02-54-20.log]
[testng] 02:54:20,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e0dcf4 - End of configuration.
[testng] [2024-04-22 02:54:23,557] [pool-1-thread-7] Initializing /data/markus/MosaiX_irregular_Z-stack_with_autofocus.zvi:
[testng] 02:54:23,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:54:23,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:23,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-22_02-54-23.log]
[testng] 02:54:23,558 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe0c0d9 - End of configuration.
[testng] [2024-04-22 02:54:24,047] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_18.zvi:
[testng] 02:54:24,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:54:24,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:24,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-22_02-54-24.log]
[testng] 02:54:24,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cf19929 - End of configuration.
[testng] [2024-04-22 02:54:27,657] [pool-1-thread-5] Initializing /data/eirinn/5_6_2009-DJ9-03_A01_01.zvi:
[testng] 02:54:27,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:54:27,657 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:27,658 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-22_02-54-27.log]
[testng] 02:54:27,658 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e3e95f - End of configuration.
[testng] [2024-04-22 02:54:27,811] [pool-1-thread-4] Initializing /data/jonas/10_0907_multidrug-0001_AB01_03.zvi:
[testng] 02:54:27,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:54:27,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:27,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-22_02-54-27.log]
[testng] 02:54:27,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7234c55d - End of configuration.
[testng] [2024-04-22 02:54:37,492] [pool-1-thread-3] Initializing /data/markus/PC12_neuroblastoma_Fura2_exp#9.zvi:
[testng] 02:54:37,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:54:37,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:37,493 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-22_02-54-37.log]
[testng] 02:54:37,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3940115 - End of configuration.
[testng] [2024-04-22 02:54:38,909] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_9.zvi:
[testng] 02:54:38,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:54:38,909 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:54:38,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-22_02-54-38.log]
[testng] 02:54:38,910 |-INFO in ch.qos.logback.core.sift.SiftProcessor@339373a8 - End of configuration.
[testng] [2024-04-22 02:54:43,535] [pool-1-thread-8] ExposureTimes: FAILED (Series 0 plane 154 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:54:43,548] [pool-1-thread-12] ExposureTimes: FAILED (Series 0 plane 12 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:54:43,592] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:54:46,489] [pool-1-thread-10] Initializing /data/markus/Branchiostoma_6x12_MosaiX_Tiles_color.zvi:
[testng] [2024-04-22 02:54:52,454] [pool-1-thread-9] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-widefield.zvi:
[testng] [2024-04-22 02:54:52,814] [pool-1-thread-5] Initializing /data/dan/adultNr1.zvi:
[testng] [2024-04-22 02:54:54,841] [pool-1-thread-12] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-ten.zvi:
[testng] [2024-04-22 02:54:55,717] [pool-1-thread-11] Initializing /data/kelsey/650x514BW.zvi:
[testng] [2024-04-22 02:54:56,154] [pool-1-thread-11] Initializing /data/markus/30channels_exposure-series.zvi:
[testng] [2024-04-22 02:54:56,345] [pool-1-thread-9] Initializing /data/christophe/Exemple_Zeiss_ROI.zvi:
[testng] [2024-04-22 02:54:56,771] [pool-1-thread-7] Initializing /data/converted/deconvolve6_Pseudo_Tl000_Zs000.zvi:
[testng] [2024-04-22 02:54:56,884] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_15.zvi:
[testng] [2024-04-22 02:55:01,607] [pool-1-thread-7] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:01,699] [pool-1-thread-9] Initializing /data/thomas/test_axiocam_3_1.zvi:
[testng] [2024-04-22 02:55:02,019] [pool-1-thread-11] Initializing /data/karsten/Bild1.zvi:
[testng] [2024-04-22 02:55:02,332] [pool-1-thread-7] Initializing /data/kelsey/1300x1030BW.zvi:
[testng] [2024-04-22 02:55:02,367] [pool-1-thread-11] Initializing /data/gaetan/gml16_cenp-fitc_dapi_12.zvi:
[testng] [2024-04-22 02:55:05,983] [pool-1-thread-9] Initializing /data/oli/10 x smc 2 neg.zvi:
[testng] [2024-04-22 02:55:06,136] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:06,592] [pool-1-thread-7] Initializing /data/qa-7332/qa-7332_expected_rendering_ARF1_M90T_01-0002_Position(46)_Gallery.tif:
[testng] [2024-04-22 02:55:07,020] [pool-1-thread-9] Initializing /data/rolf/example_2-c1.jpg:
[testng] [2024-04-22 02:55:07,380] [pool-1-thread-2] Initializing /data/rachel/40K 30s A2.zvi:
[testng] [2024-04-22 02:55:07,654] [pool-1-thread-3] Initializing /data/oli/10 x smc 1.zvi:
[testng] [2024-04-22 02:55:07,692] [pool-1-thread-6] Initializing /data/oli/10 x smc 1 neg.zvi:
[testng] [2024-04-22 02:55:07,733] [pool-1-thread-7] Initializing /data/pki/E-07.zvi:
[testng] [2024-04-22 02:55:10,918] [pool-1-thread-1] Initializing /data/rachel/40K 30s A1.zvi:
[testng] [2024-04-22 02:55:10,970] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:10,978] [pool-1-thread-4] Initializing /data/gaetan/gml16_cenp-fitc_dapi_11.zvi:
[testng] [2024-04-22 02:55:13,911] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:14,103] [pool-1-thread-9] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sectioned.zvi:
[testng] [2024-04-22 02:55:14,827] [pool-1-thread-6] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.zvi:
[testng] [2024-04-22 02:55:15,392] [pool-1-thread-2] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif:
[testng] [2024-04-22 02:55:15,696] [pool-1-thread-1] Initializing /data/chris/file01.zvi:
[testng] [2024-04-22 02:55:17,111] [pool-1-thread-3] Initializing /data/pradeep/MCF10A_Scratch-0003_CatGDsiNeg.zvi:
[testng] [2024-04-22 02:55:17,469] [pool-1-thread-2] Initializing /data/lior/live+cf2b.zvi:
[testng] [2024-04-22 02:55:17,790] [pool-1-thread-5] Initializing /data/miso/Aufnahme-184058-0002.zvi:
[testng] [2024-04-22 02:55:18,307] [pool-1-thread-8] Initializing /data/shalin/ibidiuslide1-timelapse3_mid2.zvi:
[testng] [2024-04-22 02:55:18,494] [pool-1-thread-12] Initializing /data/michel/e.zvi:
[testng] [2024-04-22 02:55:18,798] [pool-1-thread-9] Initializing /data/eirinn/12_16_2009-01-Tara-HD-Triple-5to15_Position(1)5.zvi:
[testng] [2024-04-22 02:55:20,259] [pool-1-thread-9] ExposureTimes: FAILED (Series 0 plane 13 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:20,305] [pool-1-thread-5] Initializing /data/markus/Brain_high_dynamic_range_imaging_Z-stack.zvi:
[testng] [2024-04-22 02:55:21,771] [pool-1-thread-2] Initializing /data/rolf/example_2.tif:
[testng] [2024-04-22 02:55:21,824] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_8.zvi:
[testng] [2024-04-22 02:55:26,834] [pool-1-thread-11] Initializing /data/dietmar/138.zvi:
[testng] [2024-04-22 02:55:27,087] [pool-1-thread-6] Initializing /data/converted/damian-compressed.zvi:
[testng] [2024-04-22 02:55:27,101] [pool-1-thread-4] Initializing /data/eirinn/Correctly-tiled.JPG:
[testng] [2024-04-22 02:55:27,113] [pool-1-thread-3] Initializing /data/michel/a.zvi:
[testng] [2024-04-22 02:55:27,123] [pool-1-thread-12] Initializing /data/jeffrey/750-30-03.zvi:
[testng] [2024-04-22 02:55:27,296] [pool-1-thread-8] Initializing /data/converted/damian.zvi:
[testng] [2024-04-22 02:55:27,317] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:27,329] [pool-1-thread-8] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:27,461] [pool-1-thread-3] Initializing /data/oli/10 x smc 3.zvi:
[testng] [2024-04-22 02:55:27,523] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_24.zvi:
[testng] [2024-04-22 02:55:32,731] [pool-1-thread-3] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:32,804] [pool-1-thread-4] Initializing /data/othmar/mozaic.zvi:
[testng] [2024-04-22 02:55:33,403] [pool-1-thread-8] Initializing /data/gaetan/gml16_cenp-fitc_dapi_4.zvi:
[testng] [2024-04-22 02:55:39,334] [pool-1-thread-12] Initializing /data/nicolas/image.zvi:
[testng] [2024-04-22 02:55:39,444] [pool-1-thread-12] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:39,467] [pool-1-thread-3] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-six.zvi:
[testng] [2024-04-22 02:55:40,204] [pool-1-thread-4] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:40,208] [pool-1-thread-2] Initializing /data/karsten/Bild2.zvi:
[testng] [2024-04-22 02:55:40,514] [pool-1-thread-11] Initializing /data/converted/2chZT.zvi:
[testng] [2024-04-22 02:55:44,086] [pool-1-thread-2] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.zvi:
[testng] [2024-04-22 02:55:44,254] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:44,320] [pool-1-thread-2] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:55:44,566] [pool-1-thread-12] Initializing /data/vladan/vladan.zvi:
[testng] [2024-04-22 02:55:45,783] [pool-1-thread-9] Initializing /data/gaetan/gml16_cenp-fitc_dapi_13.zvi:
[testng] [2024-04-22 02:55:52,969] [pool-1-thread-5] Initializing /data/gaetan/gml16_cenp-fitc_dapi_21.zvi:
[testng] [2024-04-22 02:56:01,099] [pool-1-thread-7] Initializing /data/markus/Material_color_image_HRc_microscanned_4x3K.zvi:
[testng] [2024-04-22 02:56:01,505] [pool-1-thread-1] Initializing /data/michel/c.zvi:
[testng] [2024-04-22 02:56:01,546] [pool-1-thread-3] Initializing /data/joseph/E-2009-0004.zvi:
[testng] [2024-04-22 02:56:02,218] [pool-1-thread-2] Initializing /data/dietmar/hMADS-24h-BAC1-7-AF647-AF488-RHO-1day-hyb-CSK-2007-06-29-0008_Position(113).zvi:
[testng] [2024-04-22 02:56:04,405] [pool-1-thread-1] Initializing /data/markus/6ch-Z-stack_deconvolved.zvi:
[testng] [2024-04-22 02:56:06,741] [pool-1-thread-8] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast.zvi:
[testng] [2024-04-22 02:56:07,352] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_6.zvi:
[testng] [2024-04-22 02:56:14,619] [pool-1-thread-11] Initializing /data/dietmar/137.zvi:
[testng] [2024-04-22 02:56:17,182] [pool-1-thread-3] Initializing /data/lee/u87.cells-0027_AB02_01.zvi:
[testng] [2024-04-22 02:56:19,224] [pool-1-thread-2] Initializing /data/darren/section0001_w1.zvi:
[testng] [2024-04-22 02:56:20,372] [pool-1-thread-4] Initializing /data/david/SNAP-181518-0001.zvi:
[testng] [2024-04-22 02:56:21,694] [pool-1-thread-11] Initializing /data/michel/b.zvi:
[testng] [2024-04-22 02:56:21,767] [pool-1-thread-9] Initializing /data/kmichel/20110209_region1_1505_atp.zvi:
[testng] [2024-04-22 02:56:22,335] [pool-1-thread-1] Initializing /data/sebastien/test.zvi:
[testng] [2024-04-22 02:56:22,812] [pool-1-thread-5] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.TIF:
[testng] [2024-04-22 02:56:22,866] [pool-1-thread-8] Initializing /data/ville/MultiCh-RGB/pollen_rgb.zvi:
[testng] [2024-04-22 02:56:23,269] [pool-1-thread-11] Initializing /data/georg/Recorder-Stream-0003.zvi:
[testng] [2024-04-22 02:56:25,030] [pool-1-thread-7] Initializing /data/joseph/E-2009-0001a.zvi:
[testng] [2024-04-22 02:56:26,585] [pool-1-thread-12] Initializing /data/lior/live+cf5b.zvi:
[testng] [2024-04-22 02:56:27,278] [pool-1-thread-3] Initializing /data/gaetan/gml16_cenp-fitc_dapi_23.zvi:
[testng] [2024-04-22 02:56:33,432] [pool-1-thread-9] Initializing /data/qa-7332/ARF1_M90T_01-0002_Position(46).zvi:
[testng] [2024-04-22 02:56:33,953] [pool-1-thread-5] Initializing /data/gaetan/gml16_cenp-fitc_dapi_3.zvi:
[testng] [2024-04-22 02:56:41,281] [pool-1-thread-8] Initializing /data/rolf/example_2-c3.jpg:
[testng] [2024-04-22 02:56:41,342] [pool-1-thread-12] Initializing /data/jan/SampleStack_Mosaic4x5_comb.zvi:
[testng] [2024-04-22 02:56:53,498] [pool-1-thread-2] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif:
[testng] [2024-04-22 02:56:53,757] [pool-1-thread-6] Initializing /data/georg/TinCD4 x Gcamp3-2x adult CyD-80uM+blebb-10uM-0001.zvi:
[testng] [2024-04-22 02:57:01,285] [pool-1-thread-7] Initializing /data/gaetan/gml16_cenp-fitc_dapi_22.zvi:
[testng] [2024-04-22 02:57:08,198] [pool-1-thread-10] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif:
[testng] [2024-04-22 02:57:08,385] [pool-1-thread-4] Initializing /data/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.zvi:
[testng] [2024-04-22 02:57:08,523] [pool-1-thread-1] Initializing /data/markus/HighSpeedParas.zvi:
[testng] [2024-04-22 02:57:46,786] [pool-1-thread-11] Initializing /data/converted/WTZER_Series76_z003_ch00.zvi:
[testng] [2024-04-22 02:57:47,137] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:57:48,174] [pool-1-thread-10] Initializing /data/gaetan/gml16_cenp-fitc_dapi_5.zvi:
[testng] [2024-04-22 02:57:55,624] [pool-1-thread-2] Initializing /data/kelsey/432x342BW.zvi:
[testng] [2024-04-22 02:57:55,692] [pool-1-thread-9] Initializing /data/gaetan/gml16_cenp-fitc_dapi_14.zvi:
[testng] [2024-04-22 02:58:03,702] [pool-1-thread-8] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c1.TIF:
[testng] [2024-04-22 02:58:03,883] [pool-1-thread-11] Initializing /data/nicolas/image.tif:
[testng] [2024-04-22 02:58:04,223] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_16.zvi:
[testng] [2024-04-22 02:58:14,473] [pool-1-thread-11] Initializing /data/oli/10 x smc 4.zvi:
[testng] [2024-04-22 02:58:14,744] [pool-1-thread-11] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:58:15,582] [pool-1-thread-5] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c2.TIF:
[testng] [2024-04-22 02:58:15,715] [pool-1-thread-8] Initializing /data/rolf/example_2.png:
[testng] [2024-04-22 02:58:15,813] [pool-1-thread-3] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c3.TIF:
[testng] [2024-04-22 02:58:16,299] [pool-1-thread-11] Initializing /data/markus/PhaseGFP-MosaiX-Timelapse_Tiles.zvi:
[testng] [2024-04-22 02:58:26,692] [pool-1-thread-8] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_(c1+c2+c3+c4).TIF:
[testng] [2024-04-22 02:58:27,228] [pool-1-thread-5] Initializing /data/jonas/10_0907_multidrug-0001_AB01_08.zvi:
[testng] [2024-04-22 02:58:38,184] [pool-1-thread-4] Initializing /data/ville/MultiCh-RGB/pollen_bw.zvi:
[testng] [2024-04-22 02:58:38,466] [pool-1-thread-7] Initializing /data/rolf/example_1-2010_11_25.zvi:
[testng] [2024-04-22 02:58:38,869] [pool-1-thread-3] Initializing /data/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.zvi:
[testng] [2024-04-22 02:58:39,257] [pool-1-thread-7] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:58:39,809] [pool-1-thread-10] Initializing /data/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.zvi:
[testng] [2024-04-22 02:58:39,963] [pool-1-thread-8] Initializing /data/dietmar/DAPI-TexasRed-0015.zvi:
[testng] [2024-04-22 02:58:41,271] [pool-1-thread-3] Initializing /data/james/Sylvain_run3_1Gy_Live7-2008-0019.zvi:
[testng] [2024-04-22 02:58:41,629] [pool-1-thread-9] Initializing /data/monica/Monica_elegans_movie.zvi:
[testng] [2024-04-22 02:58:43,905] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_25.zvi:
[testng] [2024-04-22 02:58:50,159] [pool-1-thread-12] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c4.TIF:
[testng] [2024-04-22 02:58:50,535] [pool-1-thread-4] Initializing /data/joseph/E-2009_0022.zvi:
[testng] [2024-04-22 02:58:51,949] [pool-1-thread-6] Initializing /data/converted/2ChZ.zvi:
[testng] [2024-04-22 02:58:52,199] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:58:52,358] [pool-1-thread-10] Initializing /data/markus/Smart_Experiment_4ch-T-time-stitched.zvi:
[testng] [2024-04-22 02:58:59,844] [pool-1-thread-1] Initializing /data/eirinn/12_2_2009-16-Hes5-BrdU-Proper_Position(52).zvi:
[testng] [2024-04-22 02:59:01,076] [pool-1-thread-7] Initializing /data/sam/ADDLs3-48hrsMouse-Vib50-Biotyn-IHC-s1c2r2-5x-001-07.zvi:
[testng] [2024-04-22 02:59:02,855] [pool-1-thread-3] Initializing /data/rolf/example_2-c1+c3.jpg:
[testng] [2024-04-22 02:59:03,026] [pool-1-thread-1] ExposureTimes: FAILED (Series 0 plane 13 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:59:03,043] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_2.zvi:
[testng] [2024-04-22 02:59:07,841] [pool-1-thread-8] Initializing /data/qa-21711/test.zvi:
[testng] [2024-04-22 02:59:15,205] [pool-1-thread-9] Initializing /data/markus/Mouse-newborn-panorama.zvi:
[testng] [2024-04-22 02:59:18,014] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_10.zvi:
[testng] [2024-04-22 02:59:22,723] [pool-1-thread-11] Initializing /data/karsten/247096n3s3s9.zvi:
[testng] [2024-04-22 02:59:24,608] [pool-1-thread-5] Initializing /data/oli/10 x smc 2.zvi:
[testng] [2024-04-22 02:59:24,750] [pool-1-thread-4] Initializing /data/markus/Hypocampus_Tiles_with_stiching.zvi:
[testng] [2024-04-22 02:59:26,013] [pool-1-thread-10] Initializing /data/joe/test_file_ng_2012.zvi:
[testng] [2024-04-22 02:59:26,116] [pool-1-thread-2] Initializing /data/eirinn/Pharm3-saline2-0147_11.zvi:
[testng] [2024-04-22 02:59:29,038] [pool-1-thread-5] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:59:29,407] [pool-1-thread-3] Initializing /data/strand/2Colors1Plane.zvi:
[testng] [2024-04-22 02:59:31,555] [pool-1-thread-5] Initializing /data/eirinn/11_10_2009-01-LCStim-15-10-09_Position(1).zvi:
[testng] [2024-04-22 02:59:32,118] [pool-1-thread-1] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055.zvi:
[testng] [2024-04-22 02:59:33,711] [pool-1-thread-11] Initializing /data/dan/Zstack_convalaria.zvi:
[testng] [2024-04-22 02:59:34,439] [pool-1-thread-5] Initializing /data/gaetan/gml16_cenp-fitc_dapi_1.zvi:
[testng] [2024-04-22 02:59:39,114] [pool-1-thread-6] Initializing /data/rolf/example_2-2010_11_25.zvi:
[testng] [2024-04-22 02:59:39,782] [pool-1-thread-6] ExposureTimes: FAILED (Series 0 plane 1 channel 1 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:59:40,656] [pool-1-thread-3] Initializing /data/eirinn/Demo-tile.zvi:
[testng] [2024-04-22 02:59:40,708] [pool-1-thread-1] Initializing /data/joseph/BEST_EXAMPLE_should_look_like.jpg:
[testng] [2024-04-22 02:59:41,117] [pool-1-thread-3] Initializing /data/kmichel/20110209_region4_1841_atp.zvi:
[testng] [2024-04-22 02:59:41,700] [pool-1-thread-10] Initializing /data/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.zvi:
[testng] [2024-04-22 02:59:47,318] [pool-1-thread-2] Initializing /data/converted/mri-stack.zvi:
[testng] [2024-04-22 02:59:47,334] [pool-1-thread-2] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:59:47,378] [pool-1-thread-10] ExposureTimes: FAILED (Series 0 plane 0 channel 0 (got null, expected ome.units.quantity.Time: value[0.0], unit[s] stored as java.lang.Double))
[testng] [2024-04-22 02:59:47,479] [pool-1-thread-2] Initializing /data/markus/Long_TL_CElegans.zvi:
[testng] [2024-04-22 03:00:24,976] [pool-1-thread-6] Initializing /data/michel/d.zvi:
[testng] [2024-04-22 03:00:25,051] [pool-1-thread-11] Initializing /data/darren/section0002_w1.zvi:
[testng] [2024-04-22 03:00:25,927] [pool-1-thread-9] Initializing /data/gaetan/gml16_cenp-fitc_dapi_17.zvi:
[testng] [2024-04-22 03:00:32,214] [pool-1-thread-1] Initializing /data/markus/Mouse-newborn-panorama_lossless_compressed.zvi:
[testng] [2024-04-22 03:00:33,188] [pool-1-thread-12] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.zvi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 7950, Failures: 24, Skips: 0
[testng] ===============================================
[testng]
[testng] The tests failed.
BUILD FAILED
/bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest
Total time: 13 minutes 31 seconds
Build step 'Execute shell' marked build as failure
Finished: FAILURE