Started by upstream project "BIOFORMATS-test-repo" build number 369
originally caused by:
Started by upstream project "Trigger" build number 395
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins5518597718949040605.sh
+ '[' lim = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58785_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 17:41:55,355 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 17:41:55,357 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
[testng] 17:41:55,357 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 17:41:55,358 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 17:41:55,358 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 17:41:55,358 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 17:41:55,359 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 17:41:55,359 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 17:41:55,359 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 17:41:55,360 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 17:41:55,360 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 17:41:55,360 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 17:41:55,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 17:41:55,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 17:41:55,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 17:41:55,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 17:41:55,548 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 17:41:55,548 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 17:41:55,548 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 17:41:55,549 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 17:41:55,549 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
[testng] 17:41:55,550 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
[testng] 17:41:55,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 191 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-09 17:41:55,558] [main] java.version = 17.0.2
[testng] 17:41:55,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 17:41:55,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:41:55,601 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-09_17-41-55.log]
[testng] 17:41:55,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
[testng] [2025-03-09 17:41:55,604] [main] testng.directory = /data
[testng] [2025-03-09 17:41:55,604] [main] testng.configDirectory = /config
[testng] [2025-03-09 17:41:55,613] [main] testng.multiplier = 1.0
[testng] [2025-03-09 17:41:55,614] [main] testng.in-memory = false
[testng] [2025-03-09 17:41:55,614] [main] testng.allow-missing = false
[testng] [2025-03-09 17:41:55,614] [main] user.language = en
[testng] [2025-03-09 17:41:55,614] [main] user.country = ${user.country}
[testng] [2025-03-09 17:41:55,614] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-09 17:41:56,099] [main] ----------------------------------------
[testng] [2025-03-09 17:41:56,099] [main] Total files: 21
[testng] [2025-03-09 17:41:56,099] [main] Scan time: 0.485 s (23 ms/file)
[testng] [2025-03-09 17:41:56,100] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 20 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-09 17:42:11,160] [pool-1-thread-1] Initializing /data/venu/Kontrolle0003.lim:
[testng] 17:42:11,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 17:42:11,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:11,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-09_17-42-11.log]
[testng] 17:42:11,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a72c5f0 - End of configuration.
[testng] [2025-03-09 17:42:12,038] [pool-1-thread-12] Initializing /data/venu/Kontrolle0005.lim:
[testng] 17:42:12,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 17:42:12,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:12,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-09_17-42-12.log]
[testng] 17:42:12,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75de55ca - End of configuration.
[testng] [2025-03-09 17:42:12,893] [pool-1-thread-11] Initializing /data/venu/Kontrolle0004.lim:
[testng] 17:42:12,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 17:42:12,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:12,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-09_17-42-12.log]
[testng] 17:42:12,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18120a93 - End of configuration.
[testng] [2025-03-09 17:42:13,704] [pool-1-thread-10] Initializing /data/venu/Kontrolle0002.lim:
[testng] 17:42:13,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 17:42:13,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:13,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-09_17-42-13.log]
[testng] 17:42:13,706 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e20d3c9 - End of configuration.
[testng] [2025-03-09 17:42:14,505] [pool-1-thread-9] Initializing /data/venu/Kontrolle0018.lim:
[testng] 17:42:14,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 17:42:14,505 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:14,506 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-09_17-42-14.log]
[testng] 17:42:14,506 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7beb973d - End of configuration.
[testng] [2025-03-09 17:42:15,288] [pool-1-thread-8] Initializing /data/venu/Kontrolle0011.lim:
[testng] 17:42:15,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 17:42:15,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:15,290 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-09_17-42-15.log]
[testng] 17:42:15,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fde0d1d - End of configuration.
[testng] [2025-03-09 17:42:16,067] [pool-1-thread-7] Initializing /data/venu/Kontrolle0009.lim:
[testng] 17:42:16,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 17:42:16,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:16,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-09_17-42-16.log]
[testng] 17:42:16,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6afa9ab1 - End of configuration.
[testng] [2025-03-09 17:42:16,812] [pool-1-thread-6] Initializing /data/venu/Kontrolle0001.lim:
[testng] 17:42:16,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 17:42:16,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:16,813 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-09_17-42-16.log]
[testng] 17:42:16,813 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d56e6bd - End of configuration.
[testng] [2025-03-09 17:42:17,415] [pool-1-thread-5] Initializing /data/venu/Kontrolle0020.lim:
[testng] 17:42:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 17:42:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:17,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-09_17-42-17.log]
[testng] 17:42:17,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5df9fdb - End of configuration.
[testng] [2025-03-09 17:42:18,042] [pool-1-thread-4] Initializing /data/venu/Kontrolle0019.lim:
[testng] 17:42:18,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 17:42:18,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:18,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-09_17-42-18.log]
[testng] 17:42:18,044 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ff09f61 - End of configuration.
[testng] [2025-03-09 17:42:18,551] [pool-1-thread-3] Initializing /data/venu/Kontrolle0012.lim:
[testng] 17:42:18,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 17:42:18,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:18,552 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-09_17-42-18.log]
[testng] 17:42:18,552 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d67eb11 - End of configuration.
[testng] [2025-03-09 17:42:19,031] [pool-1-thread-2] Initializing /data/venu/Kontrolle0017.lim:
[testng] 17:42:19,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 17:42:19,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 17:42:19,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-09_17-42-19.log]
[testng] 17:42:19,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64a0f473 - End of configuration.
[testng] [2025-03-09 17:42:24,521] [pool-1-thread-9] Initializing /data/venu/Kontrolle0016.lim:
[testng] [2025-03-09 17:42:25,013] [pool-1-thread-7] Initializing /data/venu/Kontrolle0010.lim:
[testng] [2025-03-09 17:42:25,497] [pool-1-thread-6] Initializing /data/venu/Kontrolle0021.lim:
[testng] [2025-03-09 17:42:25,956] [pool-1-thread-11] Initializing /data/venu/Kontrolle0007.lim:
[testng] [2025-03-09 17:42:26,464] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim:
[testng] [2025-03-09 17:42:27,096] [pool-1-thread-8] Initializing /data/venu/Kontrolle0008.lim:
[testng] [2025-03-09 17:42:27,777] [pool-1-thread-10] Initializing /data/venu/Kontrolle0015.lim:
[testng] [2025-03-09 17:42:28,534] [pool-1-thread-2] Initializing /data/venu/Kontrolle0014.lim:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 1060, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 45 seconds
Finished: SUCCESS