Started by upstream project "BIOFORMATS-test-repo" build number 369
originally caused by:
Started by upstream project "Trigger" build number 395
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins13206241189135125855.sh
+ '[' metamorph = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_58855_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 21:35:52,324 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 21:35:52,325 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
[testng] 21:35:52,325 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 21:35:52,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 21:35:52,326 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 21:35:52,326 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 21:35:52,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 21:35:52,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 21:35:52,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 21:35:52,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 21:35:52,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 21:35:52,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 21:35:52,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 21:35:52,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 21:35:52,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 21:35:52,511 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 21:35:52,516 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 21:35:52,516 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 21:35:52,516 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 21:35:52,517 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 21:35:52,517 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
[testng] 21:35:52,517 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
[testng] 21:35:52,518 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 191 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-09 21:35:52,526] [main] java.version = 17.0.2
[testng] 21:35:52,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 21:35:52,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 21:35:52,570 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-09_21-35-52.log]
[testng] 21:35:52,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
[testng] [2025-03-09 21:35:52,574] [main] testng.directory = /data
[testng] [2025-03-09 21:35:52,574] [main] testng.configDirectory = /config
[testng] [2025-03-09 21:35:52,583] [main] testng.multiplier = 1.0
[testng] [2025-03-09 21:35:52,583] [main] testng.in-memory = false
[testng] [2025-03-09 21:35:52,584] [main] testng.allow-missing = false
[testng] [2025-03-09 21:35:52,584] [main] user.language = en
[testng] [2025-03-09 21:35:52,584] [main] user.country = ${user.country}
[testng] [2025-03-09 21:35:52,584] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2025-03-09 22:19:58,859] [main] ----------------------------------------
[testng] [2025-03-09 22:19:58,859] [main] Total files: 14121
[testng] [2025-03-09 22:19:58,859] [main] Scan time: 2646.275 s (187 ms/file)
[testng] [2025-03-09 22:19:58,859] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 261 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-09 23:20:40,309] [pool-1-thread-1] Initializing /data/qa-30870/220209_posit5.tif:
[testng] 23:20:40,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 23:20:40,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:20:40,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-09_23-20-40.log]
[testng] 23:20:40,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1404bee9 - End of configuration.
[testng] [2025-03-09 23:20:43,772] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF:
[testng] 23:20:43,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 23:20:43,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:20:43,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-09_23-20-43.log]
[testng] 23:20:43,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57f3b6db - End of configuration.
[testng] [2025-03-09 23:20:47,082] [pool-1-thread-11] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF:
[testng] 23:20:47,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 23:20:47,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:20:47,082 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-09_23-20-47.log]
[testng] 23:20:47,083 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fb86522 - End of configuration.
[testng] [2025-03-09 23:20:50,496] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF:
[testng] 23:20:50,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 23:20:50,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:20:50,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-09_23-20-50.log]
[testng] 23:20:50,497 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e210f9e - End of configuration.
[testng] [2025-03-09 23:20:53,696] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] 23:20:53,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 23:20:53,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:20:53,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-09_23-20-53.log]
[testng] 23:20:53,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@188caed5 - End of configuration.
[testng] [2025-03-09 23:21:18,251] [pool-1-thread-8] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK:
[testng] 23:21:18,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 23:21:18,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:18,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-09_23-21-18.log]
[testng] 23:21:18,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b99abdf - End of configuration.
[testng] [2025-03-09 23:21:21,883] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF:
[testng] 23:21:21,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 23:21:21,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:21,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-09_23-21-21.log]
[testng] 23:21:21,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dddb586 - End of configuration.
[testng] [2025-03-09 23:21:24,434] [pool-1-thread-7] Used files list does not include base file
[testng] [2025-03-09 23:21:24,436] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] 23:21:24,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 23:21:24,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:24,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-09_23-21-24.log]
[testng] 23:21:24,437 |-INFO in ch.qos.logback.core.sift.SiftProcessor@604fc004 - End of configuration.
[testng] [2025-03-09 23:21:28,981] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish5_w1FRET_s1_t1.TIF:
[testng] 23:21:28,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 23:21:28,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:28,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-09_23-21-28.log]
[testng] 23:21:28,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@612450ed - End of configuration.
[testng] [2025-03-09 23:21:41,444] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF:
[testng] 23:21:41,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 23:21:41,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:41,445 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-09_23-21-41.log]
[testng] 23:21:41,445 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f45b869 - End of configuration.
[testng] [2025-03-09 23:21:46,029] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-09 23:21:46,032] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif:
[testng] 23:21:46,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 23:21:46,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:46,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-09_23-21-46.log]
[testng] 23:21:46,034 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36724a25 - End of configuration.
[testng] [2025-03-09 23:21:49,595] [pool-1-thread-3] Used files list does not include base file
[testng] [2025-03-09 23:21:49,597] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif:
[testng] 23:21:49,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 23:21:49,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 23:21:49,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-09_23-21-49.log]
[testng] 23:21:49,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a9e2a45 - End of configuration.
[testng] [2025-03-09 23:22:14,598] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-09 23:22:24,724] [pool-1-thread-12] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK:
[testng] [2025-03-09 23:22:28,938] [pool-1-thread-10] Initializing /data/chris/test2_w2_s1_t1.stk:
[testng] [2025-03-09 23:22:32,848] [pool-1-thread-1] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk:
[testng] [2025-03-09 23:22:46,435] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-09 23:22:58,039] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish10_w1FRET_s1_t1.TIF:
[testng] [2025-03-09 23:23:24,800] [pool-1-thread-1] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF:
[testng] [2025-03-09 23:23:28,835] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1A_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF:
[testng] [2025-03-09 23:24:37,756] [pool-1-thread-12] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK:
[testng] [2025-03-09 23:24:41,455] [pool-1-thread-1] Initializing /data/qa-16915/m-01-561.ome.tif:
[testng] [2025-03-09 23:25:01,897] [pool-1-thread-12] Initializing /data/josh/2101to600e.stk:
[testng] [2025-03-09 23:25:25,161] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF:
[testng] [2025-03-09 23:25:41,449] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-09 23:25:50,253] [pool-1-thread-7] Initializing /data/cumol-test-series/23.001:
[testng] [2025-03-09 23:25:58,222] [pool-1-thread-1] Initializing /data/josh/2101to400bstk.stk:
[testng] [2025-03-09 23:28:29,464] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg:
[testng] [2025-03-09 23:28:41,240] [pool-1-thread-7] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk:
[testng] [2025-03-09 23:28:45,336] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish4_w1FRET_s1_t1.TIF:
[testng] [2025-03-09 23:29:06,935] [pool-1-thread-12] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk:
[testng] [2025-03-09 23:29:26,233] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF:
[testng] [2025-03-09 23:29:52,588] [pool-1-thread-7] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif:
[testng] [2025-03-09 23:30:19,000] [pool-1-thread-7] Initializing /data/jae/RGB_s34.tif:
[testng] [2025-03-09 23:30:24,242] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF:
[testng] [2025-03-09 23:30:28,585] [pool-1-thread-12] Used files list does not include base file
[testng] [2025-03-09 23:30:54,266] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-09 23:33:40,189] [pool-1-thread-12] Initializing /data/ascb/mt prc1 kif4.tif:
[testng] [2025-03-09 23:34:06,461] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF:
[testng] [2025-03-09 23:34:36,223] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish4_w1FRET_t1.TIF:
[testng] [2025-03-09 23:37:52,592] [pool-1-thread-1] Initializing /data/qa-16915/m-01.tif:
[testng] [2025-03-09 23:38:21,221] [pool-1-thread-1] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-09 23:39:50,104] [pool-1-thread-1] Initializing /data/chris/Stream-2(partial).stk:
[testng] [2025-03-09 23:40:08,780] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-09 23:41:04,328] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-09 23:41:15,011] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-09 23:41:34,984] [pool-1-thread-11] Initializing /data/samples/test-plate/test_s10_t1.tif:
[testng] [2025-03-09 23:44:19,217] [pool-1-thread-4] Initializing /data/ascb/mt aim.tif:
[testng] [2025-03-09 23:44:44,104] [pool-1-thread-4] Initializing /data/josh/EditedMovies/2101to600b.stk:
[testng] [2025-03-09 23:47:04,494] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif:
[testng] [2025-03-09 23:47:07,707] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-09 23:47:48,681] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif:
[testng] [2025-03-09 23:47:52,622] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-09 23:48:35,158] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF:
[testng] [2025-03-09 23:49:43,794] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish4_w1FRET_s1_t1.TIF:
[testng] [2025-03-09 23:53:12,836] [pool-1-thread-12] Initializing /data/jcb/201008090/Color Combine.stk:
[testng] [2025-03-09 23:53:39,384] [pool-1-thread-12] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk:
[testng] [2025-03-09 23:54:54,751] [pool-1-thread-12] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF:
[testng] [2025-03-09 23:58:26,620] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-09 23:59:42,161] [pool-1-thread-1] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF:
[testng] [2025-03-09 23:59:46,717] [pool-1-thread-2] Initializing /data/jerome/deconv.STK:
[testng] [2025-03-10 00:00:10,013] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 00:00:48,362] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 00:08:20,589] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF:
[testng] [2025-03-10 00:08:26,089] [pool-1-thread-5] Used files list does not include base file
[testng] [2025-03-10 00:11:18,754] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk:
[testng] [2025-03-10 00:11:23,494] [pool-1-thread-5] Used files list does not include base file
[testng] [2025-03-10 00:13:05,223] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 00:16:53,335] [pool-1-thread-6] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif:
[testng] [2025-03-10 00:17:49,989] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-10 00:18:37,848] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF:
[testng] [2025-03-10 00:18:44,518] [pool-1-thread-2] Used files list does not include base file
[testng] [2025-03-10 00:18:58,670] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 00:19:27,903] [pool-1-thread-1] Initializing /data/samples/10xcalib.stk:
[testng] [2025-03-10 00:19:50,710] [pool-1-thread-1] Initializing /data/pang/z-stack/Z Series.tif:
[testng] [2025-03-10 00:20:15,443] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR5_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 00:22:16,236] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF:
[testng] [2025-03-10 00:22:43,677] [pool-1-thread-2] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 00:23:43,175] [pool-1-thread-2] Initializing /data/josh/EditedMovies/2101to400b.stk:
[testng] [2025-03-10 00:28:55,999] [pool-1-thread-2] Initializing /data/qa-16915/m-04-488.tif:
[testng] [2025-03-10 00:29:21,257] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF:
[testng] [2025-03-10 00:29:26,881] [pool-1-thread-2] Used files list does not include base file
[testng] [2025-03-10 00:32:31,783] [pool-1-thread-2] Initializing /data/ascb/C1 Stack.stk:
[testng] [2025-03-10 00:32:59,837] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk:
[testng] [2025-03-10 00:33:24,493] [pool-1-thread-2] Initializing /data/ascb/RNA dye MT.tif:
[testng] [2025-03-10 00:33:53,077] [pool-1-thread-2] Initializing /data/heiko/sample_3x3.stk:
[testng] [2025-03-10 00:34:21,594] [pool-1-thread-2] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF:
[testng] [2025-03-10 00:37:08,503] [pool-1-thread-2] Initializing /data/david/tl4.tif:
[testng] [2025-03-10 00:37:42,799] [pool-1-thread-6] Initializing /data/aaron/metamorph.stk:
[testng] [2025-03-10 00:37:47,061] [pool-1-thread-2] Initializing /data/josh/EditedMovies/2101to400a.stk:
[testng] [2025-03-10 00:38:28,595] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish7_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 00:39:13,038] [pool-1-thread-12] Initializing /data/josh/EditedMovies/2101to600a.stk:
[testng] [2025-03-10 00:42:00,326] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 00:42:37,466] [pool-1-thread-9] Initializing /data/benedikt/LosslessCompressedSTK.stk:
[testng] [2025-03-10 00:43:58,779] [pool-1-thread-9] Initializing /data/josh/2101to400astk.stk:
[testng] [2025-03-10 00:45:15,523] [pool-1-thread-10] Initializing /data/josh/EditedMovies/2101to800.stk:
[testng] [2025-03-10 00:45:26,940] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF:
[testng] [2025-03-10 00:46:09,916] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg:
[testng] [2025-03-10 00:46:11,674] [pool-1-thread-12] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF:
[testng] [2025-03-10 00:46:22,967] [pool-1-thread-3] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-10 00:47:14,708] [pool-1-thread-12] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk:
[testng] [2025-03-10 00:47:27,190] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-10 00:47:57,066] [pool-1-thread-12] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF:
[testng] [2025-03-10 00:48:51,369] [pool-1-thread-12] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF:
[testng] [2025-03-10 00:49:18,652] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 00:49:30,739] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 00:51:02,184] [pool-1-thread-8] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-10 00:52:05,575] [pool-1-thread-8] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif:
[testng] [2025-03-10 00:52:29,692] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk:
[testng] [2025-03-10 00:57:05,883] [pool-1-thread-3] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF:
[testng] [2025-03-10 00:57:49,612] [pool-1-thread-3] Initializing /data/thomas/test.tif:
[testng] [2025-03-10 00:58:12,527] [pool-1-thread-3] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk:
[testng] [2025-03-10 00:58:38,689] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif:
[testng] [2025-03-10 00:58:58,096] [pool-1-thread-3] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif:
[testng] [2025-03-10 00:59:20,552] [pool-1-thread-3] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK:
[testng] [2025-03-10 00:59:40,595] [pool-1-thread-8] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk:
[testng] [2025-03-10 01:00:04,888] [pool-1-thread-8] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif:
[testng] [2025-03-10 01:00:40,069] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF:
[testng] [2025-03-10 01:01:18,698] [pool-1-thread-8] Initializing /data/ascb/golgi marker 2.tif:
[testng] [2025-03-10 01:01:44,502] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF:
[testng] [2025-03-10 01:01:49,515] [pool-1-thread-8] Used files list does not include base file
[testng] [2025-03-10 01:04:50,814] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish6_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 01:06:01,497] [pool-1-thread-10] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF:
[testng] [2025-03-10 01:06:37,296] [pool-1-thread-10] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF:
[testng] [2025-03-10 01:07:27,782] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 01:07:36,548] [pool-1-thread-9] Initializing /data/grant/XYZC_Image_w1FITC.STK:
[testng] [2025-03-10 01:07:49,096] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:08:09,254] [pool-1-thread-10] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk:
[testng] [2025-03-10 01:08:29,009] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 01:10:12,729] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif:
[testng] [2025-03-10 01:10:46,448] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF:
[testng] [2025-03-10 01:10:50,352] [pool-1-thread-4] Used files list does not include base file
[testng] [2025-03-10 01:11:18,033] [pool-1-thread-7] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk:
[testng] [2025-03-10 01:12:52,020] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-10 01:13:22,377] [pool-1-thread-10] Initializing /data/samples/zserSixteen.stk:
[testng] [2025-03-10 01:13:34,134] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif:
[testng] [2025-03-10 01:13:49,155] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 01:14:12,550] [pool-1-thread-4] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF:
[testng] [2025-03-10 01:16:04,073] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF:
[testng] [2025-03-10 01:16:25,011] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to600e.stk:
[testng] [2025-03-10 01:17:53,491] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif:
[testng] [2025-03-10 01:18:11,459] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:18:56,727] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1B_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 01:22:59,070] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 01:23:49,635] [pool-1-thread-9] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk:
[testng] [2025-03-10 01:24:05,783] [pool-1-thread-9] Initializing /data/ascb/mt mklp1.tif:
[testng] [2025-03-10 01:24:21,886] [pool-1-thread-9] Initializing /data/qa-16915/m-02.tif:
[testng] [2025-03-10 01:24:41,383] [pool-1-thread-9] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF:
[testng] [2025-03-10 01:26:38,377] [pool-1-thread-9] Initializing /data/ascb/mt prc1 kif4 1.tif:
[testng] [2025-03-10 01:26:55,128] [pool-1-thread-9] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif:
[testng] [2025-03-10 01:27:52,946] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 01:28:19,248] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif:
[testng] [2025-03-10 01:28:36,233] [pool-1-thread-10] Initializing /data/heiko/sample_2x2.stk:
[testng] [2025-03-10 01:28:54,516] [pool-1-thread-10] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk:
[testng] [2025-03-10 01:29:11,465] [pool-1-thread-5] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF:
[testng] [2025-03-10 01:29:51,878] [pool-1-thread-5] Initializing /data/qa-16915/m-04.tif:
[testng] [2025-03-10 01:30:14,029] [pool-1-thread-5] Initializing /data/graham/G_Wright raw.stk:
[testng] [2025-03-10 01:30:29,737] [pool-1-thread-5] Initializing /data/qa-16915/m-02-561.ome.tif:
[testng] [2025-03-10 01:30:46,993] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 01:31:16,104] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:32:08,321] [pool-1-thread-10] Initializing /data/josh/2101to600b.stk:
[testng] [2025-03-10 01:34:15,744] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif:
[testng] [2025-03-10 01:34:37,764] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 01:35:36,841] [pool-1-thread-10] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK:
[testng] [2025-03-10 01:35:57,901] [pool-1-thread-10] Initializing /data/steve/Experiment2.stk:
[testng] [2025-03-10 01:36:18,380] [pool-1-thread-10] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF:
[testng] [2025-03-10 01:37:27,427] [pool-1-thread-12] Initializing /data/qa-31304/Well _C6_1.tif:
[testng] [2025-03-10 01:37:49,612] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif:
[testng] [2025-03-10 01:38:10,274] [pool-1-thread-12] Initializing /data/ascb/C9 Stack.tif:
[testng] [2025-03-10 01:38:31,975] [pool-1-thread-12] Initializing /data/chris/test2_w2_s1_t2.stk:
[testng] [2025-03-10 01:38:52,284] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:39:48,369] [pool-1-thread-12] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:40:48,671] [pool-1-thread-12] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK:
[testng] [2025-03-10 01:41:53,366] [pool-1-thread-12] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF:
[testng] [2025-03-10 01:43:33,568] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 01:49:42,965] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF:
[testng] [2025-03-10 01:49:48,356] [pool-1-thread-12] Used files list does not include base file
[testng] [2025-03-10 01:50:51,734] [pool-1-thread-6] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF:
[testng] [2025-03-10 01:51:10,872] [pool-1-thread-1] Initializing /data/qa-16915/m-04-561.tif:
[testng] [2025-03-10 01:51:32,501] [pool-1-thread-1] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK:
[testng] [2025-03-10 01:51:46,940] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:52:29,563] [pool-1-thread-12] Initializing /data/steve/Experiment2.tif:
[testng] [2025-03-10 01:52:39,960] [pool-1-thread-1] Initializing /data/qa-16907/1_w1Single SPI 405.TIF:
[testng] [2025-03-10 01:52:45,073] [pool-1-thread-2] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk:
[testng] [2025-03-10 01:52:48,648] [pool-1-thread-6] Initializing /data/stephane/Lame7-E5-Y+-001.stk:
[testng] [2025-03-10 01:52:58,425] [pool-1-thread-12] Initializing /data/thomas/t_test2001.tif:
[testng] [2025-03-10 01:53:07,383] [pool-1-thread-2] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif:
[testng] [2025-03-10 01:53:14,985] [pool-1-thread-6] Initializing /data/dave/Z Series.stk:
[testng] [2025-03-10 01:53:23,815] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif:
[testng] [2025-03-10 01:53:29,410] [pool-1-thread-1] Initializing /data/qa-16915/m-02-488.ome.tif:
[testng] [2025-03-10 01:53:35,948] [pool-1-thread-2] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF:
[testng] [2025-03-10 01:53:41,519] [pool-1-thread-6] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif:
[testng] [2025-03-10 01:53:53,857] [pool-1-thread-12] Initializing /data/samples/single-series-test/test_w1.TIF:
[testng] [2025-03-10 01:53:57,297] [pool-1-thread-1] Initializing /data/jacek/YFP2trans.tif:
[testng] [2025-03-10 01:54:05,987] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 01:54:19,989] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish1(ISO200nM)_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 01:54:43,744] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 01:54:53,907] [pool-1-thread-6] Initializing /data/ascb/mt prc1 kif4 3.tif:
[testng] [2025-03-10 01:54:57,595] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 01:55:24,040] [pool-1-thread-6] Initializing /data/ascb/RNA dye MT 2.tif:
[testng] [2025-03-10 01:55:45,660] [pool-1-thread-6] Initializing /data/heiko/metadata_3x3.jpg:
[testng] [2025-03-10 01:55:52,901] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish8_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 01:59:23,130] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 02:09:19,308] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish9_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 02:09:45,626] [pool-1-thread-12] Initializing /data/josh/2101to800.stk:
[testng] [2025-03-10 02:11:15,036] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 02:11:34,881] [pool-1-thread-12] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 02:11:52,753] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 02:12:06,531] [pool-1-thread-12] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF:
[testng] [2025-03-10 02:12:38,613] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF:
[testng] [2025-03-10 02:12:55,521] [pool-1-thread-12] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif:
[testng] [2025-03-10 02:13:10,950] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF:
[testng] [2025-03-10 02:13:51,380] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 02:20:50,846] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif:
[testng] [2025-03-10 02:21:11,317] [pool-1-thread-3] Initializing /data/ascb/mt racgap1 dna.tif:
[testng] [2025-03-10 02:21:26,789] [pool-1-thread-3] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF:
[testng] [2025-03-10 02:22:36,013] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg:
[testng] [2025-03-10 02:22:46,861] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif:
[testng] [2025-03-10 02:23:03,192] [pool-1-thread-3] Initializing /data/grant/Scale_bar_100um_XY_image.TIF:
[testng] [2025-03-10 02:23:33,595] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish5_w1FRET_s1_t1.TIF:
[testng] [2025-03-10 02:24:10,084] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif:
[testng] [2025-03-10 02:24:13,129] [pool-1-thread-8] Used files list does not include base file
[testng] [2025-03-10 02:24:30,914] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk:
[testng] [2025-03-10 02:24:45,869] [pool-1-thread-8] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK:
[testng] [2025-03-10 02:25:04,223] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 02:25:18,921] [pool-1-thread-10] Initializing /data/grant/X.STK:
[testng] [2025-03-10 02:25:49,928] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk:
[testng] [2025-03-10 02:26:53,860] [pool-1-thread-12] Initializing /data/qa-16915/m-01-488.ome.tif:
[testng] [2025-03-10 02:27:12,193] [pool-1-thread-12] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif:
[testng] [2025-03-10 02:27:21,511] [pool-1-thread-10] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-10 02:27:29,605] [pool-1-thread-12] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK:
[testng] [2025-03-10 02:28:09,010] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF:
[testng] [2025-03-10 02:28:21,263] [pool-1-thread-12] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF:
[testng] [2025-03-10 02:28:41,415] [pool-1-thread-10] Initializing /data/alex/Selected FITC.stk:
[testng] [2025-03-10 02:28:55,656] [pool-1-thread-10] Initializing /data/samples/zserEight.stk:
[testng] [2025-03-10 02:29:12,844] [pool-1-thread-10] Initializing /data/jayne/2celltest10fpstl65power.stk:
[testng] [2025-03-10 02:29:23,372] [pool-1-thread-12] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF:
[testng] [2025-03-10 02:29:40,689] [pool-1-thread-10] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif:
[testng] [2025-03-10 02:29:59,425] [pool-1-thread-10] Initializing /data/samples/diatoms3d.stk:
[testng] [2025-03-10 02:30:19,391] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF:
[testng] [2025-03-10 02:30:22,475] [pool-1-thread-10] Used files list does not include base file
[testng] [2025-03-10 02:32:57,173] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF:
[testng] [2025-03-10 02:33:17,319] [pool-1-thread-12] Initializing /data/qa-17827/G28P2E10-2 x5.TIF:
[testng] [2025-03-10 02:33:34,581] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF:
[testng] [2025-03-10 02:33:49,084] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF:
[testng] [2025-03-10 02:34:06,639] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif:
[testng] [2025-03-10 02:34:23,855] [pool-1-thread-5] Initializing /data/ascb/monopolar mt aim.tif:
[testng] [2025-03-10 02:34:40,059] [pool-1-thread-5] Initializing /data/graham/G_Wright deconvolved.stk:
[testng] [2025-03-10 02:34:52,481] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF:
[testng] [2025-03-10 02:34:55,502] [pool-1-thread-5] Used files list does not include base file
[testng] [2025-03-10 02:36:40,703] [pool-1-thread-5] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk:
[testng] [2025-03-10 02:37:22,342] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF:
[testng] [2025-03-10 02:37:58,006] [pool-1-thread-5] Initializing /data/chris/exp1_w1_s1_t1.tif:
[testng] [2025-03-10 02:38:05,707] [pool-1-thread-8] Initializing /data/grant/XYZ_Image.STK:
[testng] [2025-03-10 02:38:13,683] [pool-1-thread-5] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF:
[testng] [2025-03-10 02:38:30,026] [pool-1-thread-8] Initializing /data/josh/2101to600f.stk:
[testng] [2025-03-10 02:39:02,415] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF:
[testng] [2025-03-10 02:39:16,240] [pool-1-thread-5] Initializing /data/doil/001-23 dapi.stk:
[testng] [2025-03-10 02:39:27,530] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF:
[testng] [2025-03-10 02:41:21,325] [pool-1-thread-5] Initializing /data/qa-16887/m-01.tif:
[testng] [2025-03-10 02:41:38,747] [pool-1-thread-5] Initializing /data/ascb/mt prc1 kif4 2.tif:
[testng] [2025-03-10 02:41:52,519] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif:
[testng] [2025-03-10 02:41:55,438] [pool-1-thread-8] Initializing /data/josh/2101to600astk.stk:
[testng] [2025-03-10 02:43:05,725] [pool-1-thread-5] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF:
[testng] [2025-03-10 02:43:34,050] [pool-1-thread-10] Initializing /data/josh/EditedMovies/2101to600f.stk:
[testng] [2025-03-10 02:44:10,711] [pool-1-thread-12] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk:
[testng] [2025-03-10 02:44:28,711] [pool-1-thread-12] Initializing /data/samples/zser24.stk:
[testng] [2025-03-10 02:44:37,946] [pool-1-thread-5] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF:
[testng] [2025-03-10 02:44:45,492] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF:
[testng] [2025-03-10 02:44:49,492] [pool-1-thread-12] Used files list does not include base file
[testng] [2025-03-10 02:44:58,080] [pool-1-thread-5] Initializing /data/samples/10xcalib.tif:
[testng] [2025-03-10 02:45:12,642] [pool-1-thread-5] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk:
[testng] [2025-03-10 02:45:36,535] [pool-1-thread-10] Initializing /data/samples/zseries.stk:
[testng] [2025-03-10 02:45:50,060] [pool-1-thread-10] Initializing /data/ascb/golgi marker.tif:
[testng] [2025-03-10 02:46:01,987] [pool-1-thread-10] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF:
[testng] 07:42:58,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 07:42:58,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:42:58,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-10_07-42-58.log]
[testng] 07:42:58,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61e80682 - End of configuration.
[testng] 07:48:49,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 07:48:49,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 07:48:49,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_07-48-49.log]
[testng] 07:48:49,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35c034eb - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 13833, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 613 minutes 2 seconds
Finished: SUCCESS