Started by upstream project "BIOFORMATS-test-repo" build number 371
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins17756607440607860643.sh
+ '[' obf = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_59112_merge_ci -v /uod/idr/repos/curated/obf:/data -v /uod/idr-scratch/merge-ci/curated/obf:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 16:36:48,697 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 16:36:48,699 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service.
   [testng] 16:36:48,699 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 16:36:48,700 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 16:36:48,700 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 16:36:48,700 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 16:36:48,700 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 16:36:48,700 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 16:36:48,701 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 16:36:48,701 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 16:36:48,701 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 16:36:48,701 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 16:36:48,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 16:36:48,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 16:36:48,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 16:36:48,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 16:36:48,948 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 16:36:48,948 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 16:36:48,948 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 16:36:48,949 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 16:36:48,949 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration.
   [testng] 16:36:48,950 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point
   [testng] 16:36:48,950 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 249 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-10 16:36:48,959] [main] java.version = 1.8.0_342
   [testng] 16:36:48,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 16:36:48,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:36:49,006 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_16-36-48.log]
   [testng] 16:36:49,007 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration.
   [testng] [2025-03-10 16:36:49,009] [main] testng.directory = /data
   [testng] [2025-03-10 16:36:49,009] [main] testng.configDirectory = /config
   [testng] [2025-03-10 16:36:49,021] [main] testng.multiplier = 1.0
   [testng] [2025-03-10 16:36:49,021] [main] testng.in-memory = false
   [testng] [2025-03-10 16:36:49,021] [main] testng.allow-missing = false
   [testng] [2025-03-10 16:36:49,021] [main] user.language = fr
   [testng] [2025-03-10 16:36:49,021] [main] user.country = FR
   [testng] [2025-03-10 16:36:49,021] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2025-03-10 16:37:43,094] [main] ----------------------------------------
   [testng] [2025-03-10 16:37:43,094] [main] Total files: 12
   [testng] [2025-03-10 16:37:43,094] [main] Scan time: 54.072 s (4506 ms/file)
   [testng] [2025-03-10 16:37:43,094] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 11 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-10 16:38:32,805] [pool-1-thread-1] Initializing /data/qa-27923/test.obf: 
   [testng] 16:38:32,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 16:38:32,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:32,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-10_16-38-32.log]
   [testng] 16:38:32,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47e8d640 - End of configuration.
   [testng] [2025-03-10 16:38:37,215] [pool-1-thread-11] Initializing /data/tristan/Example_Chrimson_Beads_40nm.msr: 
   [testng] 16:38:37,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 16:38:37,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:37,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-10_16-38-37.log]
   [testng] 16:38:37,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@756bb341 - End of configuration.
   [testng] [2025-03-10 16:38:41,469] [pool-1-thread-10] Initializing /data/bjoernthiel/20191106__zstack.msr: 
   [testng] 16:38:41,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 16:38:41,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:41,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-10_16-38-41.log]
   [testng] 16:38:41,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b510bb6 - End of configuration.
   [testng] [2025-03-10 16:38:45,885] [pool-1-thread-9] Initializing /data/public/ngladitz/v6/test-v6-uncompressed.obf: 
   [testng] 16:38:45,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 16:38:45,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:45,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-10_16-38-45.log]
   [testng] 16:38:45,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1eb7737e - End of configuration.
   [testng] [2025-03-10 16:38:50,564] [pool-1-thread-8] Initializing /data/qa-16895/Measurement1.msr: 
   [testng] 16:38:50,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 16:38:50,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:50,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-10_16-38-50.log]
   [testng] 16:38:50,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d55cd96 - End of configuration.
   [testng] [2025-03-10 16:38:54,640] [pool-1-thread-7] Initializing /data/public/ngladitz/v6/test-v6.obf: 
   [testng] 16:38:54,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 16:38:54,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:54,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-10_16-38-54.log]
   [testng] 16:38:54,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3375ff2e - End of configuration.
   [testng] [2025-03-10 16:38:58,897] [pool-1-thread-6] Initializing /data/public/ngladitz/v4/test-v4.obf: 
   [testng] 16:38:58,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 16:38:58,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:38:58,898 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-10_16-38-58.log]
   [testng] 16:38:58,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518cd4f - End of configuration.
   [testng] [2025-03-10 16:39:03,624] [pool-1-thread-5] Initializing /data/zoltan/3D-CONFOCAL-PSF-235nm.msr: 
   [testng] 16:39:03,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 16:39:03,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:39:03,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-10_16-39-03.log]
   [testng] 16:39:03,625 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49faf5ca - End of configuration.
   [testng] [2025-03-10 16:39:07,943] [pool-1-thread-4] Initializing /data/public/ngladitz/v6/test-v6-short-write.obf: 
   [testng] 16:39:07,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 16:39:07,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:39:07,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-10_16-39-07.log]
   [testng] 16:39:07,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fdf2a92 - End of configuration.
   [testng] [2025-03-10 16:39:12,420] [pool-1-thread-3] Initializing /data/qa-17111/before 1.msr: 
   [testng] 16:39:12,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 16:39:12,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:39:12,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-10_16-39-12.log]
   [testng] 16:39:12,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a624d51 - End of configuration.
   [testng] [2025-03-10 16:39:16,964] [pool-1-thread-2] Initializing /data/public/ngladitz/v4/test-v4-uncompressed.obf: 
   [testng] 16:39:16,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 16:39:16,964 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 16:39:16,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-10_16-39-16.log]
   [testng] 16:39:16,965 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b04ace9 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 583, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 3 minutes 15 seconds
Finished: SUCCESS