Started by upstream project "BIOFORMATS-test-repo" build number 4
originally caused by:
 Started by upstream project "Trigger" build number 5
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins17341089185746043700.sh
+ '[' psd = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_595_merge_ci -v /uod/idr/repos/curated/psd:/data -v /uod/idr-scratch/merge-ci/curated/psd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:04:00,815 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:04:00,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 02:04:00,816 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:04:00,817 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:04:00,817 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:04:00,818 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:04:00,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:04:00,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:04:00,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:04:00,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:04:00,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:04:00,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:04:01,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:04:01,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:04:01,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:04:01,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:04:01,046 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:04:01,046 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:04:01,046 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:04:01,047 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:04:01,047 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 02:04:01,048 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 02:04:01,048 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 230 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-17 02:04:01,058] [main] java.version = 17.0.2
   [testng] 02:04:01,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:04:01,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:01,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-17_02-04-01.log]
   [testng] 02:04:01,104 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-03-17 02:04:01,106] [main] testng.directory = /data
   [testng] [2024-03-17 02:04:01,107] [main] testng.configDirectory = /config
   [testng] [2024-03-17 02:04:01,115] [main] testng.multiplier = 1.0
   [testng] [2024-03-17 02:04:01,116] [main] testng.in-memory = false
   [testng] [2024-03-17 02:04:01,116] [main] testng.allow-missing = false
   [testng] [2024-03-17 02:04:01,116] [main] user.language = en
   [testng] [2024-03-17 02:04:01,116] [main] user.country = ${user.country}
   [testng] [2024-03-17 02:04:01,117] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-03-17 02:04:01,495] [main] ----------------------------------------
   [testng] [2024-03-17 02:04:01,495] [main] Total files: 18
   [testng] [2024-03-17 02:04:01,495] [main] Scan time: 0.378 s (21 ms/file)
   [testng] [2024-03-17 02:04:01,495] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 18 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-17 02:04:07,822] [pool-1-thread-1] Initializing /data/cris/house.tif: 
   [testng] 02:04:07,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:04:07,823 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:07,824 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-17_02-04-07.log]
   [testng] 02:04:07,824 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15275e70 - End of configuration.
   [testng] [2024-03-17 02:04:08,346] [pool-1-thread-12] Initializing /data/qa-7632/23283078__NA_NA_27343.psd: 
   [testng] 02:04:08,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:04:08,347 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:08,348 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-17_02-04-08.log]
   [testng] 02:04:08,348 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9862e6b - End of configuration.
   [testng] [2024-03-17 02:04:08,630] [pool-1-thread-11] Initializing /data/qa-4497/22421435_Supl Fig 4_C_Flag_12987.psd: 
   [testng] 02:04:08,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:04:08,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:08,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-17_02-04-08.log]
   [testng] 02:04:08,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3813c1af - End of configuration.
   [testng] [2024-03-17 02:04:08,798] [pool-1-thread-10] Initializing /data/qa-4117/caspase gel-1.psd: 
   [testng] 02:04:08,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:04:08,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:08,800 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-17_02-04-08.log]
   [testng] 02:04:08,800 |-INFO in ch.qos.logback.core.sift.SiftProcessor@241b5e5f - End of configuration.
   [testng] [2024-03-17 02:04:08,999] [pool-1-thread-9] Initializing /data/ascb/423.psd: 
   [testng] 02:04:08,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:04:08,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:09,000 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-17_02-04-09.log]
   [testng] 02:04:09,001 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27371ac4 - End of configuration.
   [testng] [2024-03-17 02:04:09,197] [pool-1-thread-8] Initializing /data/misc/glossy_orbs.psd: 
   [testng] 02:04:09,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:04:09,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:09,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-17_02-04-09.log]
   [testng] 02:04:09,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35f0bc71 - End of configuration.
   [testng] [2024-03-17 02:04:09,352] [pool-1-thread-7] Initializing /data/jcb/Fig5A_siHP16h.tif: 
   [testng] 02:04:09,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:04:09,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:09,353 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-17_02-04-09.log]
   [testng] 02:04:09,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17126048 - End of configuration.
   [testng] [2024-03-17 02:04:09,563] [pool-1-thread-6] Initializing /data/jcb/Fig5A_sicont6h.tif: 
   [testng] 02:04:09,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:04:09,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:09,564 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-17_02-04-09.log]
   [testng] 02:04:09,564 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fa9cd6b - End of configuration.
   [testng] [2024-03-17 02:04:09,822] [pool-1-thread-5] Initializing /data/ascb/607x.psd: 
   [testng] 02:04:09,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:04:09,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:09,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-17_02-04-09.log]
   [testng] 02:04:09,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f250c58 - End of configuration.
   [testng] [2024-03-17 02:04:10,013] [pool-1-thread-4] Initializing /data/big-images/8kx8k.psd: 
   [testng] 02:04:10,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:04:10,013 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:10,014 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-17_02-04-10.log]
   [testng] 02:04:10,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@419c48c4 - End of configuration.
   [testng] [2024-03-17 02:04:10,202] [pool-1-thread-3] Initializing /data/misc/venus_composite_8bit.psd: 
   [testng] 02:04:10,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:04:10,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:10,203 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-17_02-04-10.log]
   [testng] 02:04:10,204 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e3d2b36 - End of configuration.
   [testng] [2024-03-17 02:04:10,392] [pool-1-thread-2] Initializing /data/misc/smilie.psd: 
   [testng] 02:04:10,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:04:10,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:04:10,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-17_02-04-10.log]
   [testng] 02:04:10,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@244de6f1 - End of configuration.
   [testng] [2024-03-17 02:04:13,597] [pool-1-thread-8] Initializing /data/jcb/Fig5A_sip1506h.tif: 
   [testng] [2024-03-17 02:04:13,824] [pool-1-thread-11] Initializing /data/ascb/thin&thick fill.2.psd: 
   [testng] [2024-03-17 02:04:14,081] [pool-1-thread-2] Initializing /data/misc/venus_composite.psd: 
   [testng] [2024-03-17 02:04:14,261] [pool-1-thread-7] Initializing /data/misc/vig_drawing_1.psd: 
   [testng] [2024-03-17 02:04:14,639] [pool-1-thread-10] Initializing /data/simon/colour_separated_image.psd: 
   [testng] [2024-03-17 02:04:14,826] [pool-1-thread-6] Initializing /data/misc/glossy_buttons.psd: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 954, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 36 seconds
Finished: SUCCESS