Started by upstream project "BIOFORMATS-test-repo" build number 380
originally caused by:
 Started by upstream project "Trigger" build number 402
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins9217365753450955810.sh
+ '[' gatan-dm2 = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_60129_merge_ci -v /uod/idr/repos/curated/gatan-dm2:/data -v /uod/idr-scratch/merge-ci/curated/gatan-dm2:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:52:51,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 03:52:51,502 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 03:52:51,502 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:52:51,503 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:52:51,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:52:51,503 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:52:51,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:52:51,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:52:51,504 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:52:51,504 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:52:51,505 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:52:51,505 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:52:51,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:52:51,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:52:51,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:52:51,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:52:51,686 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:52:51,686 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:52:51,686 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:52:51,687 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:52:51,687 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 03:52:51,687 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 03:52:51,688 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 184 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-16 03:52:51,696] [main] java.version = 17.0.2
   [testng] 03:52:51,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:52:51,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:52:51,738 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-16_03-52-51.log]
   [testng] 03:52:51,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-03-16 03:52:51,742] [main] testng.directory = /data
   [testng] [2025-03-16 03:52:51,742] [main] testng.configDirectory = /config
   [testng] [2025-03-16 03:52:51,750] [main] testng.multiplier = 1.0
   [testng] [2025-03-16 03:52:51,751] [main] testng.in-memory = false
   [testng] [2025-03-16 03:52:51,751] [main] testng.allow-missing = false
   [testng] [2025-03-16 03:52:51,751] [main] user.language = en
   [testng] [2025-03-16 03:52:51,751] [main] user.country = ${user.country}
   [testng] [2025-03-16 03:52:51,751] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-03-16 03:53:30,715] [main] ----------------------------------------
   [testng] [2025-03-16 03:53:30,715] [main] Total files: 25
   [testng] [2025-03-16 03:53:30,715] [main] Scan time: 38.963 s (1558 ms/file)
   [testng] [2025-03-16 03:53:30,715] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 18 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-16 03:54:17,764] [pool-1-thread-1] Initializing /data/pang/screen capture of metadata/tem_dm_keywords_info.png: 
   [testng] 03:54:17,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:54:17,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:17,765 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-16_03-54-17.log]
   [testng] 03:54:17,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191e1084 - End of configuration.
   [testng] [2025-03-16 03:54:17,864] [pool-1-thread-12] Initializing /data/imagic/not read correctly/Zucchini_preview.png: 
   [testng] 03:54:17,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:54:17,864 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:17,865 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-16_03-54-17.log]
   [testng] 03:54:17,866 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76920921 - End of configuration.
   [testng] [2025-03-16 03:54:17,974] [pool-1-thread-11] Initializing /data/imagic/1-1.dm2: 
   [testng] 03:54:17,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:54:17,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:17,975 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-16_03-54-17.log]
   [testng] 03:54:17,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46a0d84b - End of configuration.
   [testng] [2025-03-16 03:54:18,554] [pool-1-thread-10] Initializing /data/pang/screen capture of metadata/tem_dm_general_info.png: 
   [testng] 03:54:18,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:54:18,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:18,555 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-16_03-54-18.log]
   [testng] 03:54:18,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d0ba7cf - End of configuration.
   [testng] [2025-03-16 03:54:18,674] [pool-1-thread-9] Initializing /data/imagic/not read correctly/Zucchini.dm2: 
   [testng] 03:54:18,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:54:18,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:18,675 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-16_03-54-18.log]
   [testng] 03:54:18,675 |-INFO in ch.qos.logback.core.sift.SiftProcessor@567ed717 - End of configuration.
   [testng] [2025-03-16 03:54:19,237] [pool-1-thread-8] Initializing /data/imagic/not read correctly/Abeta Moon_preview.png: 
   [testng] 03:54:19,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:54:19,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:19,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-16_03-54-19.log]
   [testng] 03:54:19,239 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f8e5b76 - End of configuration.
   [testng] [2025-03-16 03:54:19,316] [pool-1-thread-7] Initializing /data/imagic/13008.dm2: 
   [testng] 03:54:19,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:54:19,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:19,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-16_03-54-19.log]
   [testng] 03:54:19,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e6a99be - End of configuration.
   [testng] [2025-03-16 03:54:19,816] [pool-1-thread-6] Initializing /data/pang/grating025k.dm2: 
   [testng] 03:54:19,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:54:19,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:19,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-16_03-54-19.log]
   [testng] 03:54:19,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@303ad8a6 - End of configuration.
   [testng] [2025-03-16 03:54:20,340] [pool-1-thread-5] Initializing /data/pang/screen capture of metadata/tem_dm_microscope_info.png: 
   [testng] 03:54:20,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:54:20,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:20,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-16_03-54-20.log]
   [testng] 03:54:20,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42af08b4 - End of configuration.
   [testng] [2025-03-16 03:54:20,443] [pool-1-thread-4] Initializing /data/pang/screen capture of metadata/tem_dm_tags_info1.png: 
   [testng] 03:54:20,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:54:20,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:20,444 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-16_03-54-20.log]
   [testng] 03:54:20,445 |-INFO in ch.qos.logback.core.sift.SiftProcessor@562447f0 - End of configuration.
   [testng] [2025-03-16 03:54:20,550] [pool-1-thread-3] Initializing /data/imagic/not read correctly/Abeta Moon.dm2: 
   [testng] 03:54:20,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:54:20,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:20,551 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-16_03-54-20.log]
   [testng] 03:54:20,551 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b2cb0c6 - End of configuration.
   [testng] [2025-03-16 03:54:21,070] [pool-1-thread-2] Initializing /data/imagic/TEM 10118.dm2: 
   [testng] 03:54:21,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:54:21,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:54:21,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-16_03-54-21.log]
   [testng] 03:54:21,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e1d3580 - End of configuration.
   [testng] [2025-03-16 03:54:26,228] [pool-1-thread-12] Initializing /data/imagic/Histiocyte in Skin Dermis.dm2: 
   [testng] [2025-03-16 03:54:26,853] [pool-1-thread-10] Initializing /data/pang/screen capture of metadata/tem_dm_tags_info2.png: 
   [testng] [2025-03-16 03:54:26,940] [pool-1-thread-8] Initializing /data/pang/DLMeD2E1_010500x03.dm2: 
   [testng] [2025-03-16 03:54:27,546] [pool-1-thread-1] Initializing /data/pang/signed: 
   [testng] [2025-03-16 03:54:28,152] [pool-1-thread-4] Initializing /data/pang/10500x-o4: 
   [testng] [2025-03-16 03:54:29,015] [pool-1-thread-5] Initializing /data/pang/unproc-auto: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 954, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 1 minute 52 seconds
Finished: SUCCESS