Started by upstream project "BIOFORMATS-test-repo" build number 381
originally caused by:
Started by upstream project "Trigger" build number 403
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder
[BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins13756362125725115500.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_60229_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:56:49,108 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
[testng] 01:56:49,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service.
[testng] 01:56:49,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:56:49,110 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:56:49,110 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:56:49,110 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:56:49,111 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:56:49,111 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:56:49,111 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:56:49,111 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:56:49,112 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:56:49,112 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:56:49,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:56:49,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:56:49,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:56:49,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:56:49,367 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:56:49,367 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:56:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:56:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:56:49,367 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration.
[testng] 01:56:49,368 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point
[testng] 01:56:49,368 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 257 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2025-03-17 01:56:49,378] [main] java.version = 1.8.0_342
[testng] 01:56:49,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:56:49,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:56:49,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-17_01-56-49.log]
[testng] 01:56:49,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration.
[testng] [2025-03-17 01:56:49,430] [main] testng.directory = /data
[testng] [2025-03-17 01:56:49,430] [main] testng.configDirectory = /config
[testng] [2025-03-17 01:56:49,442] [main] testng.multiplier = 1.0
[testng] [2025-03-17 01:56:49,442] [main] testng.in-memory = false
[testng] [2025-03-17 01:56:49,442] [main] testng.allow-missing = false
[testng] [2025-03-17 01:56:49,442] [main] user.language = fr
[testng] [2025-03-17 01:56:49,442] [main] user.country = FR
[testng] [2025-03-17 01:56:49,442] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2025-03-17 01:57:11,285] [main] ----------------------------------------
[testng] [2025-03-17 01:57:11,285] [main] Total files: 103
[testng] [2025-03-17 01:57:11,285] [main] Scan time: 21.843 s (212 ms/file)
[testng] [2025-03-17 01:57:11,285] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2025-03-17 02:00:10,661] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] 02:00:10,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 02:00:10,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:10,663 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-17_02-00-10.log]
[testng] 02:00:10,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d75513d - End of configuration.
[testng] [2025-03-17 02:00:11,096] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] 02:00:11,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 02:00:11,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:11,097 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-17_02-00-11.log]
[testng] 02:00:11,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76d28c3c - End of configuration.
[testng] [2025-03-17 02:00:11,705] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] 02:00:11,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 02:00:11,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:11,706 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-17_02-00-11.log]
[testng] 02:00:11,706 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11b19407 - End of configuration.
[testng] [2025-03-17 02:00:12,234] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] 02:00:12,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 02:00:12,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:12,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-17_02-00-12.log]
[testng] 02:00:12,235 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68d6df7b - End of configuration.
[testng] [2025-03-17 02:00:15,694] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] 02:00:15,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 02:00:15,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:15,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-17_02-00-15.log]
[testng] 02:00:15,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a6a32f6 - End of configuration.
[testng] [2025-03-17 02:00:16,254] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] 02:00:16,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 02:00:16,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:16,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-17_02-00-16.log]
[testng] 02:00:16,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c1ec081 - End of configuration.
[testng] [2025-03-17 02:00:20,493] [pool-1-thread-7] Initializing /data/qa-7642/8.dm4:
[testng] 02:00:20,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 02:00:20,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:20,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-17_02-00-20.log]
[testng] 02:00:20,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5613a30c - End of configuration.
[testng] [2025-03-17 02:00:21,590] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] 02:00:21,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 02:00:21,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:21,591 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-17_02-00-21.log]
[testng] 02:00:21,591 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f7c2687 - End of configuration.
[testng] [2025-03-17 02:00:26,680] [pool-1-thread-5] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] 02:00:26,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 02:00:26,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:26,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-17_02-00-26.log]
[testng] 02:00:26,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d97f6f0 - End of configuration.
[testng] [2025-03-17 02:00:27,464] [pool-1-thread-4] Initializing /data/jay/dnasample.tif:
[testng] 02:00:27,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 02:00:27,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:27,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-17_02-00-27.log]
[testng] 02:00:27,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f4752e5 - End of configuration.
[testng] [2025-03-17 02:00:35,275] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif:
[testng] 02:00:35,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 02:00:35,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:35,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-17_02-00-35.log]
[testng] 02:00:35,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1981fc78 - End of configuration.
[testng] [2025-03-17 02:00:41,353] [pool-1-thread-2] Initializing /data/jay/DMtest2.dm3:
[testng] 02:00:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 02:00:41,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 02:00:41,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-17_02-00-41.log]
[testng] 02:00:41,354 |-INFO in ch.qos.logback.core.sift.SiftProcessor@737ac312 - End of configuration.
[testng] [2025-03-17 02:00:52,913] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2025-03-17 02:00:53,960] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2025-03-17 02:00:54,786] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2025-03-17 02:00:55,609] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2025-03-17 02:00:57,009] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2025-03-17 02:00:58,794] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2025-03-17 02:01:05,490] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2025-03-17 02:01:13,498] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2025-03-17 02:01:15,918] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2025-03-17 02:01:21,829] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2025-03-17 02:01:27,254] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2025-03-17 02:01:31,082] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2025-03-17 02:01:39,533] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2025-03-17 02:01:40,916] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2025-03-17 02:01:41,880] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] [2025-03-17 02:01:48,995] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3:
[testng] [2025-03-17 02:01:49,995] [pool-1-thread-8] Initializing /data/jay/DMtest.dm3:
[testng] [2025-03-17 02:01:51,420] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2025-03-17 02:01:54,068] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2025-03-17 02:01:55,003] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2025-03-17 02:01:57,197] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2025-03-17 02:02:00,393] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4:
[testng] [2025-03-17 02:02:03,388] [pool-1-thread-3] Initializing /data/ofra/lowloss.dm3:
[testng] [2025-03-17 02:02:05,113] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2025-03-17 02:02:12,811] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3:
[testng] [2025-03-17 02:02:13,732] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2025-03-17 02:02:15,357] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2025-03-17 02:02:20,620] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2025-03-17 02:02:21,363] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2025-03-17 02:02:21,941] [pool-1-thread-2] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2025-03-17 02:02:23,554] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2025-03-17 02:02:24,450] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2025-03-17 02:02:31,797] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2025-03-17 02:02:32,685] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2025-03-17 02:02:33,498] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2025-03-17 02:02:39,489] [pool-1-thread-4] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2025-03-17 02:02:46,418] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2025-03-17 02:02:48,124] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2025-03-17 02:02:50,475] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2025-03-17 02:02:51,421] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2025-03-17 02:02:54,448] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2025-03-17 02:02:55,784] [pool-1-thread-9] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2025-03-17 02:02:57,751] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2025-03-17 02:03:04,240] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2025-03-17 02:03:04,997] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2025-03-17 02:03:08,916] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2025-03-17 02:03:09,542] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2025-03-17 02:03:09,825] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2025-03-17 02:03:11,941] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2025-03-17 02:03:16,340] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2025-03-17 02:03:16,969] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2025-03-17 02:03:17,399] [pool-1-thread-10] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2025-03-17 02:03:18,288] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2025-03-17 02:03:27,161] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2025-03-17 02:03:28,507] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2025-03-17 02:03:30,788] [pool-1-thread-3] Initializing /data/samples/test-tiles.dm3:
[testng] [2025-03-17 02:03:31,595] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2025-03-17 02:03:34,396] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2025-03-17 02:03:37,166] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2025-03-17 02:03:37,928] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2025-03-17 02:03:38,817] [pool-1-thread-12] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2025-03-17 02:03:39,528] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2025-03-17 02:03:46,113] [pool-1-thread-5] Initializing /data/melissa/annotation-test.tif:
[testng] [2025-03-17 02:03:51,774] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2025-03-17 02:03:52,642] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3:
[testng] [2025-03-17 02:03:54,297] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2025-03-17 02:04:01,949] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2025-03-17 02:04:02,811] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2025-03-17 02:04:04,538] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2025-03-17 02:04:09,566] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2025-03-17 02:04:11,166] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2025-03-17 02:04:12,122] [pool-1-thread-7] Initializing /data/jay/Carbon.34.dm3:
[testng] [2025-03-17 02:04:12,920] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3:
[testng] [2025-03-17 02:04:14,279] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2025-03-17 02:04:18,803] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2025-03-17 02:04:20,704] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2025-03-17 02:04:22,082] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2025-03-17 02:04:23,507] [pool-1-thread-4] Initializing /data/jay/camtest1.dm3:
[testng] [2025-03-17 02:04:29,856] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2025-03-17 02:04:35,097] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2025-03-17 02:04:36,579] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2025-03-17 02:04:38,684] [pool-1-thread-7] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2025-03-17 02:04:39,220] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2025-03-17 02:04:44,310] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2025-03-17 02:04:45,108] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3:
[testng] [2025-03-17 02:04:45,863] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 8 minutes 28 seconds
Finished: SUCCESS