Started by upstream project "BIOFORMATS-test-repo" build number 388
originally caused by:
 Started by upstream project "Trigger" build number 411
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@15
[BIOFORMATS-test-folder@15] $ /bin/bash -xe /tmp/jenkins17162645605545612899.sh
+ '[' jpeg2000 = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_61478_merge_ci -v /uod/idr/repos/curated/jpeg2000:/data -v /uod/idr-scratch/merge-ci/curated/jpeg2000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 05:05:22,046 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 05:05:22,047 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 05:05:22,047 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:05:22,048 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 05:05:22,049 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 05:05:22,049 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 05:05:22,049 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 05:05:22,049 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:05:22,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 05:05:22,050 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 05:05:22,050 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 05:05:22,051 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 05:05:22,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 05:05:22,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 05:05:22,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 05:05:22,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 05:05:22,241 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 05:05:22,241 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 05:05:22,241 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 05:05:22,242 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 05:05:22,242 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 05:05:22,243 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 05:05:22,243 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 193 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-23 05:05:22,252] [main] java.version = 17.0.2
   [testng] 05:05:22,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 05:05:22,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:05:22,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-23_05-05-22.log]
   [testng] 05:05:22,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-03-23 05:05:22,297] [main] testng.directory = /data
   [testng] [2025-03-23 05:05:22,297] [main] testng.configDirectory = /config
   [testng] [2025-03-23 05:05:22,306] [main] testng.multiplier = 1.0
   [testng] [2025-03-23 05:05:22,306] [main] testng.in-memory = false
   [testng] [2025-03-23 05:05:22,307] [main] testng.allow-missing = false
   [testng] [2025-03-23 05:05:22,307] [main] user.language = en
   [testng] [2025-03-23 05:05:22,307] [main] user.country = ${user.country}
   [testng] [2025-03-23 05:05:22,307] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-03-23 05:06:57,339] [main] ----------------------------------------
   [testng] [2025-03-23 05:06:57,339] [main] Total files: 31
   [testng] [2025-03-23 05:06:57,339] [main] Scan time: 95.031 s (3065 ms/file)
   [testng] [2025-03-23 05:06:57,339] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 30 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-23 05:08:49,778] [pool-1-thread-1] Initializing /data/venu/Multichannel 3a.jpg: 
   [testng] 05:08:49,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 05:08:49,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:08:49,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-23_05-08-49.log]
   [testng] 05:08:49,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5180968b - End of configuration.
   [testng] [2025-03-23 05:08:50,450] [pool-1-thread-12] Initializing /data/venu/Multichannel 3.jp2: 
   [testng] 05:08:50,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 05:08:50,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:08:50,451 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-23_05-08-50.log]
   [testng] 05:08:50,452 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79ac1212 - End of configuration.
   [testng] [2025-03-23 05:08:53,280] [pool-1-thread-11] Initializing /data/david/000000_000001.jpx: 
   [testng] 05:08:53,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 05:08:53,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:08:53,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-23_05-08-53.log]
   [testng] 05:08:53,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41ee90ab - End of configuration.
   [testng] [2025-03-23 05:08:56,082] [pool-1-thread-10] Initializing /data/vikram/Captured 3.jp2: 
   [testng] 05:08:56,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 05:08:56,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:08:56,083 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-23_05-08-56.log]
   [testng] 05:08:56,083 |-INFO in ch.qos.logback.core.sift.SiftProcessor@289dc7ae - End of configuration.
   [testng] [2025-03-23 05:08:59,053] [pool-1-thread-9] Initializing /data/david/C1R1_FOS.jp2: 
   [testng] 05:08:59,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 05:08:59,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:08:59,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-23_05-08-59.log]
   [testng] 05:08:59,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72515c59 - End of configuration.
   [testng] [2025-03-23 05:09:01,668] [pool-1-thread-8] Initializing /data/angel/002_L050071_32_01_09_x2.jp2: 
   [testng] 05:09:01,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 05:09:01,668 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:01,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-23_05-09-01.log]
   [testng] 05:09:01,669 |-INFO in ch.qos.logback.core.sift.SiftProcessor@481eb826 - End of configuration.
   [testng] [2025-03-23 05:09:04,475] [pool-1-thread-7] Initializing /data/mike/LCM-4-3-color-cleaned-LOCI.tiff: 
   [testng] 05:09:04,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 05:09:04,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:04,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-23_05-09-04.log]
   [testng] 05:09:04,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@291b8dd8 - End of configuration.
   [testng] [2025-03-23 05:09:10,926] [pool-1-thread-6] Initializing /data/david/multichannel-3d-MBF-type.jpx: 
   [testng] 05:09:10,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 05:09:10,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:10,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-23_05-09-10.log]
   [testng] 05:09:10,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5468ea46 - End of configuration.
   [testng] [2025-03-23 05:09:13,326] [pool-1-thread-5] Initializing /data/david/multichannel-2d test-non MBF-type.jp2: 
   [testng] 05:09:13,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 05:09:13,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:13,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-23_05-09-13.log]
   [testng] 05:09:13,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@240bdfb5 - End of configuration.
   [testng] [2025-03-23 05:09:16,025] [pool-1-thread-4] Initializing /data/vikram/Captured 2.jp2: 
   [testng] 05:09:16,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 05:09:16,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:16,026 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-23_05-09-16.log]
   [testng] 05:09:16,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b1ddb3c - End of configuration.
   [testng] [2025-03-23 05:09:18,783] [pool-1-thread-3] Initializing /data/david/cy5-tph.jp2: 
   [testng] 05:09:18,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 05:09:18,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:18,784 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-23_05-09-18.log]
   [testng] 05:09:18,784 |-INFO in ch.qos.logback.core.sift.SiftProcessor@360cec37 - End of configuration.
   [testng] [2025-03-23 05:09:21,512] [pool-1-thread-2] Initializing /data/vikram/Captured 1.jp2: 
   [testng] 05:09:21,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 05:09:21,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 05:09:21,513 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-23_05-09-21.log]
   [testng] 05:09:21,513 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56b8bcce - End of configuration.
   [testng] [2025-03-23 05:09:39,416] [pool-1-thread-1] Initializing /data/vikram/Captured 5.jp2: 
   [testng] [2025-03-23 05:09:45,974] [pool-1-thread-2] Initializing /data/angel/052_L050071_56_x2hv.jp2: 
   [testng] [2025-03-23 05:09:48,966] [pool-1-thread-10] Initializing /data/big-images/2kx2k.jpf: 
   [testng] [2025-03-23 05:09:51,905] [pool-1-thread-4] Initializing /data/misc/clown-rgb.jbig: 
   [testng] [2025-03-23 05:09:58,550] [pool-1-thread-11] Initializing /data/david/multichannel-2d test.jp2: 
   [testng] [2025-03-23 05:10:04,709] [pool-1-thread-12] Initializing /data/mike/LCM-4-3-color-cleaned.tiff: 
   [testng] [2025-03-23 05:10:12,633] [pool-1-thread-8] Initializing /data/frans/flower.jp2: 
   [testng] [2025-03-23 05:10:24,241] [pool-1-thread-1] Initializing /data/big-images/8kx8k.jpf: 
   [testng] [2025-03-23 05:10:28,110] [pool-1-thread-7] Initializing /data/aryeh/flour 12.jp2: 
   [testng] [2025-03-23 05:10:33,552] [pool-1-thread-9] Initializing /data/misc/clown-rgb.jpc: 
   [testng] [2025-03-23 05:10:43,828] [pool-1-thread-10] Initializing /data/misc/clown-rgb.jp2: 
   [testng] [2025-03-23 05:10:50,297] [pool-1-thread-2] Initializing /data/david/multichannel-3d-non-MBF-trial-2.jpx: 
   [testng] [2025-03-23 05:10:53,998] [pool-1-thread-4] Initializing /data/mario/b0bCDME-0007_wB05_s1_z1_t1_cGFP_u001.jp2: 
   [testng] [2025-03-23 05:11:00,038] [pool-1-thread-7] Initializing /data/kraig/head.jp2: 
   [testng] [2025-03-23 05:11:03,841] [pool-1-thread-12] Initializing /data/mike/LCM4-1-cr10-cleaned.jp2: 
   [testng] [2025-03-23 05:11:07,493] [pool-1-thread-8] Initializing /data/vikram/Captured 4.jp2: 
   [testng] [2025-03-23 05:11:10,857] [pool-1-thread-9] Initializing /data/mike/LCM-4-3-color-cleaned.jp2: 
   [testng] [2025-03-23 05:11:14,793] [pool-1-thread-5] Initializing /data/big-images/4kx4k.jpf: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1590, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 9 minutes 53 seconds
Finished: SUCCESS