Started by upstream project "BIOFORMATS-test-repo" build number 46
originally caused by:
 Started by upstream project "Trigger" build number 53
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins17757300636013717163.sh
+ '[' mrw = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_6628_merge_ci -v /uod/idr/repos/curated/mrw:/data -v /uod/idr-scratch/merge-ci/curated/mrw:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 02:08:08,751 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:08:08,753 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 02:08:08,753 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:08:08,754 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:08:08,755 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:08:08,755 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:08:08,756 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:08:08,756 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:08:08,756 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:08:08,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:08:08,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:08:08,758 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:08:08,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:08:08,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:08:08,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:08:08,988 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:08:08,994 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:08:08,995 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:08:08,995 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:08:08,995 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:08:08,995 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 02:08:08,996 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 02:08:08,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 240 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-27 02:08:09,007] [main] java.version = 11.0.16
   [testng] 02:08:09,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:08:09,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:09,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-27_02-08-09.log]
   [testng] 02:08:09,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-04-27 02:08:09,066] [main] testng.directory = /data
   [testng] [2024-04-27 02:08:09,067] [main] testng.configDirectory = /config
   [testng] [2024-04-27 02:08:09,078] [main] testng.multiplier = 1.0
   [testng] [2024-04-27 02:08:09,080] [main] testng.in-memory = false
   [testng] [2024-04-27 02:08:09,080] [main] testng.allow-missing = false
   [testng] [2024-04-27 02:08:09,080] [main] user.language = en
   [testng] [2024-04-27 02:08:09,080] [main] user.country = ${user.country}
   [testng] [2024-04-27 02:08:09,080] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-27 02:08:09,532] [main] ----------------------------------------
   [testng] [2024-04-27 02:08:09,533] [main] Total files: 19
   [testng] [2024-04-27 02:08:09,533] [main] Scan time: 0.451 s (23 ms/file)
   [testng] [2024-04-27 02:08:09,533] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 19 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-27 02:08:12,691] [pool-1-thread-1] Initializing /data/samples/05-Sep-11_nyc_swiatla_0619.mrw: 
   [testng] 02:08:12,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:08:12,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-27_02-08-12.log]
   [testng] 02:08:12,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6efcec04 - End of configuration.
   [testng] [2024-04-27 02:08:12,748] [pool-1-thread-12] Initializing /data/samples/05-Sep-11_nyc_swiatla_0612.mrw: 
   [testng] 02:08:12,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:08:12,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-27_02-08-12.log]
   [testng] 02:08:12,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55c6db80 - End of configuration.
   [testng] [2024-04-27 02:08:12,842] [pool-1-thread-11] Initializing /data/samples/05-Aug-17_bokeh_0214_400.mrw: 
   [testng] 02:08:12,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:08:12,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-27_02-08-12.log]
   [testng] 02:08:12,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cb177c8 - End of configuration.
   [testng] [2024-04-27 02:08:12,896] [pool-1-thread-10] Initializing /data/samples/1600R PICT0005.MRW: 
   [testng] 02:08:12,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:08:12,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-27_02-08-12.log]
   [testng] 02:08:12,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@319c2aaf - End of configuration.
   [testng] [2024-04-27 02:08:12,925] [pool-1-thread-9] Initializing /data/samples/05-Sep-10_nyc_swiatla_0584.mrw: 
   [testng] 02:08:12,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:08:12,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,926 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-27_02-08-12.log]
   [testng] 02:08:12,926 |-INFO in ch.qos.logback.core.sift.SiftProcessor@740d9745 - End of configuration.
   [testng] [2024-04-27 02:08:12,954] [pool-1-thread-8] Initializing /data/samples/05-Sep-07_nyc_0531.mrw: 
   [testng] 02:08:12,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:08:12,955 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:12,956 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-27_02-08-12.log]
   [testng] 02:08:12,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5144c452 - End of configuration.
   [testng] [2024-04-27 02:08:13,008] [pool-1-thread-7] Initializing /data/samples/05-Sep-22_statua_0800.mrw: 
   [testng] 02:08:13,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:08:13,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-27_02-08-13.log]
   [testng] 02:08:13,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22dca74a - End of configuration.
   [testng] [2024-04-27 02:08:13,071] [pool-1-thread-6] Initializing /data/samples/800R PICT0010.MRW: 
   [testng] 02:08:13,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:08:13,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,072 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-27_02-08-13.log]
   [testng] 02:08:13,073 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17f181b4 - End of configuration.
   [testng] [2024-04-27 02:08:13,112] [pool-1-thread-5] Initializing /data/samples/400R PICT0003.MRW: 
   [testng] 02:08:13,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:08:13,112 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,113 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-27_02-08-13.log]
   [testng] 02:08:13,114 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32f590b5 - End of configuration.
   [testng] [2024-04-27 02:08:13,136] [pool-1-thread-4] Initializing /data/samples/05-Aug-17_bokeh_0215_400.mrw: 
   [testng] 02:08:13,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:08:13,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-27_02-08-13.log]
   [testng] 02:08:13,137 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60222b10 - End of configuration.
   [testng] [2024-04-27 02:08:13,158] [pool-1-thread-3] Initializing /data/samples/100R PICT0001.MRW: 
   [testng] 02:08:13,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:08:13,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,160 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-27_02-08-13.log]
   [testng] 02:08:13,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7487962c - End of configuration.
   [testng] [2024-04-27 02:08:13,212] [pool-1-thread-2] Initializing /data/samples/200R PICT0002.MRW: 
   [testng] 02:08:13,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:08:13,212 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:13,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-27_02-08-13.log]
   [testng] 02:08:13,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@505b05e - End of configuration.
   [testng] [2024-04-27 02:08:21,163] [pool-1-thread-1] Initializing /data/samples/3200R PICT0006.MRW: 
   [testng] [2024-04-27 02:08:21,202] [pool-1-thread-11] Initializing /data/samples/05-Sep-14_sigma_0698.mrw: 
   [testng] [2024-04-27 02:08:21,238] [pool-1-thread-8] Initializing /data/samples/05-Aug-17_manhatan_0321.mrw: 
   [testng] [2024-04-27 02:08:21,281] [pool-1-thread-5] Initializing /data/samples/05-Sep-22_statua_0837.mrw: 
   [testng] [2024-04-27 02:08:21,305] [pool-1-thread-6] Initializing /data/samples/05-Sep-22_statua_0818.mrw: 
   [testng] [2024-04-27 02:08:21,358] [pool-1-thread-10] Initializing /data/samples/05-Sep-03_duperele_0472.mrw: 
   [testng] [2024-04-27 02:08:21,390] [pool-1-thread-3] Initializing /data/samples/05-Aug-21_duperele_0353.mrw: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1007, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 21 seconds
Finished: SUCCESS