Started by upstream project "BIOFORMATS-test-repo" build number 5
originally caused by:
Started by upstream project "Trigger" build number 6
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins12804516409990402935.sh
+ '[' canon = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_670_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 00:32:30,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:32:30,240 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
[testng] 00:32:30,240 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:32:30,241 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:32:30,241 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:32:30,241 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:32:30,242 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:32:30,242 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:32:30,242 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:32:30,243 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:32:30,243 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:32:30,243 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:32:30,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:32:30,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:32:30,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:32:30,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:32:30,506 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:32:30,507 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:32:30,507 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:32:30,507 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:32:30,507 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
[testng] 00:32:30,508 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
[testng] 00:32:30,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 266 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-18 00:32:30,518] [main] java.version = 1.8.0_342
[testng] 00:32:30,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:32:30,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:30,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-18_00-32-30.log]
[testng] 00:32:30,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-03-18 00:32:30,571] [main] testng.directory = /data
[testng] [2024-03-18 00:32:30,571] [main] testng.configDirectory = /config
[testng] [2024-03-18 00:32:30,584] [main] testng.multiplier = 1.0
[testng] [2024-03-18 00:32:30,584] [main] testng.in-memory = false
[testng] [2024-03-18 00:32:30,584] [main] testng.allow-missing = false
[testng] [2024-03-18 00:32:30,584] [main] user.language = fr
[testng] [2024-03-18 00:32:30,584] [main] user.country = FR
[testng] [2024-03-18 00:32:30,585] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-03-18 00:32:33,214] [main] ----------------------------------------
[testng] [2024-03-18 00:32:33,215] [main] Total files: 13
[testng] [2024-03-18 00:32:33,215] [main] Scan time: 2.629 s (202 ms/file)
[testng] [2024-03-18 00:32:33,215] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 13 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-18 00:32:37,091] [pool-1-thread-1] Initializing /data/pete/DNG-WAV.WAV:
[testng] 00:32:37,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:32:37,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:37,093 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-18_00-32-37.log]
[testng] 00:32:37,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52c49b2c - End of configuration.
[testng] [2024-03-18 00:32:37,183] [pool-1-thread-12] Initializing /data/kinor/2013_03_08_0808.CR2:
[testng] 00:32:37,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:32:37,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:37,184 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-18_00-32-37.log]
[testng] 00:32:37,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23f47ece - End of configuration.
[testng] [2024-03-18 00:32:37,258] [pool-1-thread-11] Initializing /data/pete/DNG-CRW.CRW:
[testng] 00:32:37,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:32:37,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:37,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-18_00-32-37.log]
[testng] 00:32:37,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33903cf7 - End of configuration.
[testng] [2024-03-18 00:32:37,395] [pool-1-thread-10] Initializing /data/pete/Raw-THM.THM:
[testng] 00:32:37,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:32:37,395 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:37,396 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-18_00-32-37.log]
[testng] 00:32:37,396 |-INFO in ch.qos.logback.core.sift.SiftProcessor@565d26b7 - End of configuration.
[testng] [2024-03-18 00:32:37,629] [pool-1-thread-9] Initializing /data/pete/Raw-WAV.WAV:
[testng] 00:32:37,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:32:37,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:37,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-18_00-32-37.log]
[testng] 00:32:37,631 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41e86342 - End of configuration.
[testng] [2024-03-18 00:32:38,047] [pool-1-thread-8] Initializing /data/pete/Raw-CRW.CRW:
[testng] 00:32:38,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:32:38,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:38,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-18_00-32-38.log]
[testng] 00:32:38,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b4edc58 - End of configuration.
[testng] [2024-03-18 00:32:38,277] [pool-1-thread-7] Initializing /data/pete/Learning to Fly.JPG:
[testng] 00:32:38,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:32:38,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:38,278 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-18_00-32-38.log]
[testng] 00:32:38,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@420ad50a - End of configuration.
[testng] [2024-03-18 00:32:38,993] [pool-1-thread-6] Initializing /data/pete/DNG-JPG.JPG:
[testng] 00:32:38,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:32:38,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:38,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-18_00-32-38.log]
[testng] 00:32:38,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e48580f - End of configuration.
[testng] [2024-03-18 00:32:39,269] [pool-1-thread-5] Initializing /data/pete/DNG-THM.THM:
[testng] 00:32:39,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:32:39,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:39,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-18_00-32-39.log]
[testng] 00:32:39,270 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cd28f81 - End of configuration.
[testng] [2024-03-18 00:32:39,359] [pool-1-thread-4] Initializing /data/pete/Raw-CR2.CR2:
[testng] 00:32:39,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:32:39,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:39,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-18_00-32-39.log]
[testng] 00:32:39,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f4f4b6d - End of configuration.
[testng] [2024-03-18 00:32:39,593] [pool-1-thread-3] Initializing /data/pete/DNG-CR2.CR2:
[testng] 00:32:39,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:32:39,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:39,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-18_00-32-39.log]
[testng] 00:32:39,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2947572 - End of configuration.
[testng] [2024-03-18 00:32:39,651] [pool-1-thread-2] Initializing /data/cls/_N5Y0001.CR2:
[testng] 00:32:39,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:32:39,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:32:39,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-18_00-32-39.log]
[testng] 00:32:39,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da2df93 - End of configuration.
[testng] [2024-03-18 00:32:47,063] [pool-1-thread-2] Initializing /data/pete/Raw-JPG.JPG:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 689, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 32 seconds
Finished: SUCCESS