Started by upstream project "BIOFORMATS-test-repo" build number 5
originally caused by:
Started by upstream project "Trigger" build number 6
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins11915540285952861897.sh
+ '[' sis = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_708_merge_ci -v /uod/idr/repos/curated/sis:/data -v /uod/idr-scratch/merge-ci/curated/sis:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 01:12:51,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:12:51,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:12:51,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:12:51,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:12:51,886 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:12:51,886 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:12:51,886 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:12:51,887 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:12:51,887 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 01:12:51,888 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 01:12:51,888 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 565 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-18 01:12:51,928] [main] java.version = 1.8.0_342
[testng] 01:12:51,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:12:51,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:12:51,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-18_01-12-51.log]
[testng] 01:12:51,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-03-18 01:12:51,987] [main] testng.directory = /data
[testng] [2024-03-18 01:12:51,987] [main] testng.configDirectory = /config
[testng] [2024-03-18 01:12:52,088] [main] testng.multiplier = 1.0
[testng] [2024-03-18 01:12:52,088] [main] testng.in-memory = false
[testng] [2024-03-18 01:12:52,088] [main] testng.allow-missing = false
[testng] [2024-03-18 01:12:52,088] [main] user.language = fr
[testng] [2024-03-18 01:12:52,088] [main] user.country = FR
[testng] [2024-03-18 01:12:52,088] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-03-18 01:12:53,317] [main] ----------------------------------------
[testng] [2024-03-18 01:12:53,317] [main] Total files: 13
[testng] [2024-03-18 01:12:53,318] [main] Scan time: 1.228 s (94 ms/file)
[testng] [2024-03-18 01:12:53,318] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 11 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-18 01:12:58,678] [pool-1-thread-1] Initializing /data/dimitri/ELN-ARM_00049_38.tif:
[testng] 01:12:58,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:12:58,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:12:58,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-18_01-12-58.log]
[testng] 01:12:58,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61ba55ca - End of configuration.
[testng] [2024-03-18 01:12:58,950] [pool-1-thread-11] Initializing /data/glen/CG 3.31 10K.tif:
[testng] 01:12:58,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:12:58,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:12:58,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-18_01-12-58.log]
[testng] 01:12:58,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@179b9cc1 - End of configuration.
[testng] [2024-03-18 01:12:59,233] [pool-1-thread-10] Initializing /data/glen/L1468a-2_4_15000X.tif:
[testng] 01:12:59,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:12:59,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:12:59,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-18_01-12-59.log]
[testng] 01:12:59,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4331f654 - End of configuration.
[testng] [2024-03-18 01:12:59,554] [pool-1-thread-9] Initializing /data/glen/L1500k P_3_7500X.tif:
[testng] 01:12:59,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:12:59,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:12:59,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-18_01-12-59.log]
[testng] 01:12:59,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12531d6a - End of configuration.
[testng] [2024-03-18 01:13:00,007] [pool-1-thread-8] Initializing /data/glen/L1500k P_4_7500X.tif:
[testng] 01:13:00,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:13:00,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:00,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-18_01-13-00.log]
[testng] 01:13:00,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@480169f1 - End of configuration.
[testng] [2024-03-18 01:13:00,485] [pool-1-thread-7] Initializing /data/pki/Tv2.tif:
[testng] 01:13:00,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:13:00,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:00,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-18_01-13-00.log]
[testng] 01:13:00,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ed47ee7 - End of configuration.
[testng] [2024-03-18 01:13:00,651] [pool-1-thread-6] Initializing /data/strand/FS44-1-254.tif:
[testng] 01:13:00,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:13:00,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:00,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-18_01-13-00.log]
[testng] 01:13:00,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@186a598 - End of configuration.
[testng] [2024-03-18 01:13:00,807] [pool-1-thread-5] Initializing /data/glen/CG 3.31 20K.tif:
[testng] 01:13:00,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:13:00,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:00,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-18_01-13-00.log]
[testng] 01:13:00,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f6f909d - End of configuration.
[testng] [2024-03-18 01:13:00,952] [pool-1-thread-4] Initializing /data/glen/CG 3.31 15K.tif:
[testng] 01:13:00,952 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:13:00,952 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:00,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-18_01-13-00.log]
[testng] 01:13:00,954 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d511bcd - End of configuration.
[testng] [2024-03-18 01:13:01,205] [pool-1-thread-3] Initializing /data/russell/Arbacia 2week ADL.tif:
[testng] 01:13:01,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:13:01,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:01,206 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-18_01-13-01.log]
[testng] 01:13:01,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8ad204f - End of configuration.
[testng] [2024-03-18 01:13:01,482] [pool-1-thread-2] Initializing /data/strand/MIA.tif:
[testng] 01:13:01,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:13:01,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:13:01,483 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-18_01-13-01.log]
[testng] 01:13:01,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@561895fa - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 583, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 20 seconds
Finished: SUCCESS