Started by upstream project "BIOFORMATS-test-repo" build number 52
originally caused by:
Started by upstream project "Trigger" build number 59
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins2504938264270251647.sh
+ '[' cellvoyager = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_7678_merge_ci -v /uod/idr/repos/curated/cellvoyager:/data -v /uod/idr-scratch/merge-ci/curated/cellvoyager:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 03:02:46,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 03:02:46,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 03:02:46,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 03:02:46,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 03:02:46,792 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 03:02:46,792 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 03:02:46,792 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 03:02:46,793 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 03:02:46,793 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 03:02:46,794 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 03:02:46,794 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 478 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-03 03:02:46,804] [main] java.version = 1.8.0_342
[testng] 03:02:46,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 03:02:46,809 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:02:46,856 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-03_03-02-46.log]
[testng] 03:02:46,858 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-03 03:02:46,859] [main] testng.directory = /data
[testng] [2024-05-03 03:02:46,860] [main] testng.configDirectory = /config
[testng] [2024-05-03 03:02:46,872] [main] testng.multiplier = 1.0
[testng] [2024-05-03 03:02:46,872] [main] testng.in-memory = false
[testng] [2024-05-03 03:02:46,872] [main] testng.allow-missing = false
[testng] [2024-05-03 03:02:46,872] [main] user.language = en
[testng] [2024-05-03 03:02:46,872] [main] user.country = ${user.country}
[testng] [2024-05-03 03:02:46,872] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-03 03:02:48,055] [main] ----------------------------------------
[testng] [2024-05-03 03:02:48,055] [main] Total files: 5
[testng] [2024-05-03 03:02:48,055] [main] Scan time: 1.182 s (236 ms/file)
[testng] [2024-05-03 03:02:48,055] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 3 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-03 03:02:49,257] [pool-1-thread-1] Initializing /data/jean-yves/1_3_1_2_1/20130731T133016/MeasurementResult.xml:
[testng] 03:02:49,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 03:02:49,258 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:02:49,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-03_03-02-49.log]
[testng] 03:02:49,259 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1abfafd6 - End of configuration.
[testng] [2024-05-03 03:02:49,310] [pool-1-thread-3] Initializing /data/jean-yves/20131025T092701/MeasurementResult.xml:
[testng] 03:02:49,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 03:02:49,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:02:49,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-03_03-02-49.log]
[testng] 03:02:49,311 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14442c8b - End of configuration.
[testng] [2024-05-03 03:02:49,352] [pool-1-thread-2] Initializing /data/jean-yves/20131025T101017/MeasurementResult.xml:
[testng] 03:02:49,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 03:02:49,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 03:02:49,353 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-03_03-02-49.log]
[testng] 03:02:49,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@311063b5 - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 159, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 9 seconds
Finished: SUCCESS