Started by upstream project "BIOFORMATS-test-repo" build number 6
originally caused by:
Started by upstream project "Trigger" build number 9
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9751484223483078846.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_793_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 09:39:24,612 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 09:39:24,613 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 09:39:24,613 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 09:39:24,614 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 09:39:24,614 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 09:39:24,614 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 09:39:24,615 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 09:39:24,615 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 09:39:24,615 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 09:39:24,616 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 09:39:24,616 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 09:39:24,616 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 09:39:24,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 09:39:24,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 09:39:24,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 09:39:24,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 09:39:24,795 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 09:39:24,795 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 09:39:24,796 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 09:39:24,796 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 09:39:24,796 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 09:39:24,797 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 09:39:24,797 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 182 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-03-20 09:39:24,805] [main] java.version = 17.0.2
[testng] 09:39:24,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 09:39:24,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:24,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-20_09-39-24.log]
[testng] 09:39:24,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-03-20 09:39:24,850] [main] testng.directory = /data
[testng] [2024-03-20 09:39:24,850] [main] testng.configDirectory = /config
[testng] [2024-03-20 09:39:24,858] [main] testng.multiplier = 1.0
[testng] [2024-03-20 09:39:24,858] [main] testng.in-memory = false
[testng] [2024-03-20 09:39:24,858] [main] testng.allow-missing = false
[testng] [2024-03-20 09:39:24,859] [main] user.language = en
[testng] [2024-03-20 09:39:24,859] [main] user.country = ${user.country}
[testng] [2024-03-20 09:39:24,859] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-03-20 09:39:26,001] [main] ----------------------------------------
[testng] [2024-03-20 09:39:26,001] [main] Total files: 103
[testng] [2024-03-20 09:39:26,001] [main] Scan time: 1.142 s (11 ms/file)
[testng] [2024-03-20 09:39:26,001] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-03-20 09:39:36,593] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3:
[testng] 09:39:36,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 09:39:36,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,594 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-20_09-39-36.log]
[testng] 09:39:36,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f8c4321 - End of configuration.
[testng] [2024-03-20 09:39:36,621] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] 09:39:36,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 09:39:36,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,623 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-20_09-39-36.log]
[testng] 09:39:36,623 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1991c92e - End of configuration.
[testng] [2024-03-20 09:39:36,643] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] 09:39:36,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 09:39:36,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-20_09-39-36.log]
[testng] 09:39:36,644 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c158194 - End of configuration.
[testng] [2024-03-20 09:39:36,710] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] 09:39:36,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 09:39:36,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-20_09-39-36.log]
[testng] 09:39:36,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3619ddf3 - End of configuration.
[testng] [2024-03-20 09:39:36,728] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] 09:39:36,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 09:39:36,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,729 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-20_09-39-36.log]
[testng] 09:39:36,729 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34425952 - End of configuration.
[testng] [2024-03-20 09:39:36,752] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] 09:39:36,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 09:39:36,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,754 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-20_09-39-36.log]
[testng] 09:39:36,754 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6dfda84b - End of configuration.
[testng] [2024-03-20 09:39:36,782] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] 09:39:36,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 09:39:36,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-20_09-39-36.log]
[testng] 09:39:36,784 |-INFO in ch.qos.logback.core.sift.SiftProcessor@310ce61b - End of configuration.
[testng] [2024-03-20 09:39:36,869] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] 09:39:36,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 09:39:36,869 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-20_09-39-36.log]
[testng] 09:39:36,871 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc69032 - End of configuration.
[testng] [2024-03-20 09:39:36,891] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] 09:39:36,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 09:39:36,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:36,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-20_09-39-36.log]
[testng] 09:39:36,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51cffc54 - End of configuration.
[testng] [2024-03-20 09:39:37,088] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] 09:39:37,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 09:39:37,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:37,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-20_09-39-37.log]
[testng] 09:39:37,089 |-INFO in ch.qos.logback.core.sift.SiftProcessor@120def1a - End of configuration.
[testng] [2024-03-20 09:39:37,128] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] 09:39:37,129 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 09:39:37,129 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:37,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-20_09-39-37.log]
[testng] 09:39:37,130 |-INFO in ch.qos.logback.core.sift.SiftProcessor@229caa90 - End of configuration.
[testng] [2024-03-20 09:39:37,277] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] 09:39:37,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 09:39:37,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:39:37,278 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-20_09-39-37.log]
[testng] 09:39:37,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4998a435 - End of configuration.
[testng] [2024-03-20 09:39:39,181] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-03-20 09:39:39,202] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-03-20 09:39:39,282] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-03-20 09:39:39,298] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3:
[testng] [2024-03-20 09:39:39,699] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-03-20 09:39:39,792] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-03-20 09:39:40,141] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-03-20 09:39:40,243] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-03-20 09:39:40,653] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] [2024-03-20 09:39:40,687] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-03-20 09:39:41,012] [pool-1-thread-7] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-03-20 09:39:41,081] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-03-20 09:39:41,214] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-03-20 09:39:41,787] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-03-20 09:39:41,914] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-03-20 09:39:42,552] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-03-20 09:39:42,621] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-03-20 09:39:42,770] [pool-1-thread-12] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-03-20 09:39:43,205] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-03-20 09:39:43,652] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-03-20 09:39:43,796] [pool-1-thread-8] Initializing /data/jay/dnasample.tif:
[testng] [2024-03-20 09:39:44,133] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-03-20 09:39:44,632] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-03-20 09:39:44,920] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-03-20 09:39:45,774] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-03-20 09:39:45,932] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-03-20 09:39:46,327] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-03-20 09:39:47,457] [pool-1-thread-12] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-03-20 09:39:47,518] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] [2024-03-20 09:39:47,815] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-03-20 09:39:47,959] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-03-20 09:39:48,314] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-03-20 09:39:48,802] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-03-20 09:39:49,116] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-03-20 09:39:50,140] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-03-20 09:39:50,238] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] [2024-03-20 09:39:50,881] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] [2024-03-20 09:39:51,782] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-03-20 09:39:51,915] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-03-20 09:39:52,753] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-03-20 09:39:53,665] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] [2024-03-20 09:39:55,025] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-03-20 09:39:55,237] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-03-20 09:39:56,237] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-03-20 09:39:56,293] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-03-20 09:39:56,656] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] [2024-03-20 09:39:57,095] [pool-1-thread-6] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-03-20 09:39:57,487] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-03-20 09:39:57,856] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-03-20 09:39:57,921] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif:
[testng] [2024-03-20 09:39:58,511] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4:
[testng] [2024-03-20 09:39:58,683] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] [2024-03-20 09:39:58,737] [pool-1-thread-10] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-03-20 09:39:58,945] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-03-20 09:39:59,880] [pool-1-thread-11] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-03-20 09:40:00,167] [pool-1-thread-3] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-03-20 09:40:00,442] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-03-20 09:40:00,950] [pool-1-thread-9] Initializing /data/qa-21761/example.dm4:
[testng] [2024-03-20 09:40:01,214] [pool-1-thread-3] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-03-20 09:40:01,358] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-03-20 09:40:02,360] [pool-1-thread-5] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-03-20 09:40:02,500] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-03-20 09:40:02,668] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-03-20 09:40:03,306] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-03-20 09:40:03,936] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-03-20 09:40:04,377] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-03-20 09:40:04,540] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-03-20 09:40:04,683] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-03-20 09:40:04,926] [pool-1-thread-8] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] [2024-03-20 09:40:05,436] [pool-1-thread-2] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-03-20 09:40:05,742] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-03-20 09:40:05,875] [pool-1-thread-2] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-03-20 09:40:05,922] [pool-1-thread-5] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng] [2024-03-20 09:40:06,096] [pool-1-thread-11] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-03-20 09:40:06,490] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] [2024-03-20 09:40:06,802] [pool-1-thread-5] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-03-20 09:40:07,068] [pool-1-thread-11] Initializing /data/jay/DMtest.dm3:
[testng] [2024-03-20 09:40:07,646] [pool-1-thread-6] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-03-20 09:40:07,770] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-03-20 09:40:08,597] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-03-20 09:40:08,706] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-03-20 09:40:09,238] [pool-1-thread-1] Initializing /data/jay/Carbon.34.dm3:
[testng] [2024-03-20 09:40:09,331] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-03-20 09:40:09,728] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-03-20 09:40:09,859] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-03-20 09:40:10,038] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 3 seconds
Finished: SUCCESS