Started by upstream project "BIOFORMATS-test-repo" build number 55
originally caused by:
 Started by upstream project "Trigger" build number 62
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9214018429722199598.sh
+ '[' leica-tcs = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_8152_merge_ci -v /uod/idr/repos/curated/leica-tcs:/data -v /uod/idr-scratch/merge-ci/curated/leica-tcs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:41:43,382 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:41:43,384 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:41:43,384 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:41:43,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:41:43,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:41:43,386 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:41:43,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:41:43,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:41:43,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:41:43,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:41:43,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:41:43,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:41:43,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:41:43,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:41:43,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:41:43,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:41:43,651 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:41:43,652 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:41:43,652 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:41:43,652 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:41:43,652 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:41:43,653 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:41:43,653 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-06 02:41:43,663] [main] java.version = 1.8.0_342
   [testng] 02:41:43,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:41:43,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:41:43,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-06_02-41-43.log]
   [testng] 02:41:43,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-05-06 02:41:43,715] [main] testng.directory = /data
   [testng] [2024-05-06 02:41:43,715] [main] testng.configDirectory = /config
   [testng] [2024-05-06 02:41:43,727] [main] testng.multiplier = 1.0
   [testng] [2024-05-06 02:41:43,727] [main] testng.in-memory = false
   [testng] [2024-05-06 02:41:43,727] [main] testng.allow-missing = false
   [testng] [2024-05-06 02:41:43,727] [main] user.language = fr
   [testng] [2024-05-06 02:41:43,727] [main] user.country = FR
   [testng] [2024-05-06 02:41:43,727] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-05-06 02:41:55,687] [main] ----------------------------------------
   [testng] [2024-05-06 02:41:55,687] [main] Total files: 944
   [testng] [2024-05-06 02:41:55,687] [main] Scan time: 11.96 s (12 ms/file)
   [testng] [2024-05-06 02:41:55,688] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-06 02:42:28,463] [pool-1-thread-1] Initializing /data/stjude/AntoDay4dblcatdataGRP.tif: 
   [testng] 02:42:28,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:42:28,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-06_02-42-28.log]
   [testng] 02:42:28,465 |-INFO in ch.qos.logback.core.sift.SiftProcessor@308e562d - End of configuration.
   [testng] [2024-05-06 02:42:28,526] [pool-1-thread-12] Initializing /data/stjude/AntoDay1dblGRP.tif: 
   [testng] 02:42:28,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:42:28,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-06_02-42-28.log]
   [testng] 02:42:28,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67a5403b - End of configuration.
   [testng] [2024-05-06 02:42:28,568] [pool-1-thread-11] Initializing /data/stjude/AntoDay1cy3/c01f0001.TIF: 
   [testng] 02:42:28,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:42:28,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-06_02-42-28.log]
   [testng] 02:42:28,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f280a62 - End of configuration.
   [testng] [2024-05-06 02:42:28,599] [pool-1-thread-10] Initializing /data/brian/Series002_z01.tif: 
   [testng] 02:42:28,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:42:28,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-06_02-42-28.log]
   [testng] 02:42:28,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52d2d214 - End of configuration.
   [testng] [2024-05-06 02:42:28,640] [pool-1-thread-9] Initializing /data/brian/Series002_z00_ch00.tif: 
   [testng] 02:42:28,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:42:28,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-06_02-42-28.log]
   [testng] 02:42:28,641 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7340eab6 - End of configuration.
   [testng] [2024-05-06 02:42:28,670] [pool-1-thread-8] Initializing /data/stjude/AntoDayzerocy3GRP.tif: 
   [testng] 02:42:28,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:42:28,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,671 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-06_02-42-28.log]
   [testng] 02:42:28,672 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6add203c - End of configuration.
   [testng] [2024-05-06 02:42:28,698] [pool-1-thread-7] Initializing /data/stjude/AntoDay4dblmyGRP.tif: 
   [testng] 02:42:28,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:42:28,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-06_02-42-28.log]
   [testng] 02:42:28,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fe80a71 - End of configuration.
   [testng] [2024-05-06 02:42:28,748] [pool-1-thread-6] Initializing /data/stjude/Antoday1dblmysglGRP.tif: 
   [testng] 02:42:28,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:42:28,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,749 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-06_02-42-28.log]
   [testng] 02:42:28,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31ec6df - End of configuration.
   [testng] [2024-05-06 02:42:28,783] [pool-1-thread-5] Initializing /data/primate/Leica_Image.tif: 
   [testng] 02:42:28,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:42:28,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,784 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-06_02-42-28.log]
   [testng] 02:42:28,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33ead281 - End of configuration.
   [testng] [2024-05-06 02:42:28,844] [pool-1-thread-4] Initializing /data/dave/series 35/042911_Series035_t00_z000_ch00.tif: 
   [testng] 02:42:28,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:42:28,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:28,845 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-06_02-42-28.log]
   [testng] 02:42:28,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea4082c - End of configuration.
   [testng] [2024-05-06 02:42:33,980] [pool-1-thread-3] Initializing /data/stjude/AntoDay4dblmy2GRP.tif: 
   [testng] 02:42:33,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:42:33,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:33,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-06_02-42-33.log]
   [testng] 02:42:33,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23dd36a4 - End of configuration.
   [testng] [2024-05-06 02:42:34,031] [pool-1-thread-2] Initializing /data/martin/Series028_z00_ch00.tif: 
   [testng] 02:42:34,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:42:34,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:42:34,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-06_02-42-34.log]
   [testng] 02:42:34,033 |-INFO in ch.qos.logback.core.sift.SiftProcessor@649fd666 - End of configuration.
   [testng] [2024-05-06 02:42:35,636] [pool-1-thread-9] Initializing /data/stjude/Antoday1dblcatsglGRP.tif: 
   [testng] [2024-05-06 02:42:35,681] [pool-1-thread-6] Initializing /data/stjude/Antoday1dblcat2dataGRP.tif: 
   [testng] [2024-05-06 02:42:35,718] [pool-1-thread-3] Initializing /data/stjude/AntoDayzerocy3OVP.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 10 minutes 4 seconds
Finished: SUCCESS