Started by upstream project "BIOFORMATS-test-repo" build number 58
originally caused by:
Started by upstream project "Trigger" build number 65
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins6337873533429278093.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_8512_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:49,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:49,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 01:21:49,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:49,234 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:49,234 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:49,235 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:49,235 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:49,235 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:49,236 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:49,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:49,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:49,237 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:49,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:49,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:49,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:49,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:49,522 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:49,523 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:49,523 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:49,523 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:49,523 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 01:21:49,524 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 01:21:49,524 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 288 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-09 01:21:49,536] [main] java.version = 21
[testng] 01:21:49,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:49,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:49,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-09_01-21-49.log]
[testng] 01:21:49,613 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-05-09 01:21:49,616] [main] testng.directory = /data
[testng] [2024-05-09 01:21:49,617] [main] testng.configDirectory = /config
[testng] [2024-05-09 01:21:49,632] [main] testng.multiplier = 1.0
[testng] [2024-05-09 01:21:49,636] [main] testng.in-memory = false
[testng] [2024-05-09 01:21:49,636] [main] testng.allow-missing = false
[testng] [2024-05-09 01:21:49,636] [main] user.language = en
[testng] [2024-05-09 01:21:49,636] [main] user.country = ${user.country}
[testng] [2024-05-09 01:21:49,637] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-05-09 01:22:06,273] [main] ----------------------------------------
[testng] [2024-05-09 01:22:06,273] [main] Total files: 283
[testng] [2024-05-09 01:22:06,273] [main] Scan time: 16.636 s (58 ms/file)
[testng] [2024-05-09 01:22:06,273] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-09 01:30:07,739] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir:
[testng] 01:30:07,739 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:30:07,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:07,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-09_01-30-07.log]
[testng] 01:30:07,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c08f2d8 - End of configuration.
[testng] [2024-05-09 01:30:09,109] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] 01:30:09,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:30:09,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:09,111 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-09_01-30-09.log]
[testng] 01:30:09,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c84b6cf - End of configuration.
[testng] [2024-05-09 01:30:09,208] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] 01:30:09,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:30:09,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:09,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-09_01-30-09.log]
[testng] 01:30:09,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5024249e - End of configuration.
[testng] [2024-05-09 01:30:09,656] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] 01:30:09,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:30:09,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:09,657 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-09_01-30-09.log]
[testng] 01:30:09,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f468f66 - End of configuration.
[testng] [2024-05-09 01:30:09,700] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir:
[testng] 01:30:09,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:30:09,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:09,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-09_01-30-09.log]
[testng] 01:30:09,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fe8e825 - End of configuration.
[testng] [2024-05-09 01:30:28,678] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir:
[testng] 01:30:28,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:30:28,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:28,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-09_01-30-28.log]
[testng] 01:30:28,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b0bfb26 - End of configuration.
[testng] [2024-05-09 01:30:29,058] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] 01:30:29,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:30:29,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:29,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-09_01-30-29.log]
[testng] 01:30:29,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d37faef - End of configuration.
[testng] [2024-05-09 01:30:29,111] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 01:30:29,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:30:29,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:29,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-09_01-30-29.log]
[testng] 01:30:29,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@249fa48c - End of configuration.
[testng] [2024-05-09 01:30:29,197] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir:
[testng] 01:30:29,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:30:29,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:29,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-09_01-30-29.log]
[testng] 01:30:29,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18ac9e3c - End of configuration.
[testng] [2024-05-09 01:30:51,805] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif:
[testng] 01:30:51,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:30:51,806 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:51,807 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-09_01-30-51.log]
[testng] 01:30:51,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12528488 - End of configuration.
[testng] [2024-05-09 01:30:51,862] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] 01:30:51,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:30:51,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:51,863 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-09_01-30-51.log]
[testng] 01:30:51,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6da68e70 - End of configuration.
[testng] [2024-05-09 01:30:51,923] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:30:51,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:30:51,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:51,924 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-09_01-30-51.log]
[testng] 01:30:51,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c8fba36 - End of configuration.
[testng] [2024-05-09 01:30:54,537] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-05-09 01:30:54,647] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-05-09 01:30:55,049] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-05-09 01:30:55,112] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-05-09 01:30:55,156] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-05-09 01:30:55,360] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-05-09 01:31:01,386] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-05-09 01:31:02,034] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-05-09 01:31:02,421] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-05-09 01:31:02,619] [pool-1-thread-7] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-05-09 01:31:03,260] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-05-09 01:31:03,561] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-05-09 01:31:04,048] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-05-09 01:31:04,377] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-05-09 01:31:04,849] [pool-1-thread-11] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-05-09 01:31:05,099] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-05-09 01:31:05,370] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-05-09 01:31:05,827] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-05-09 01:31:06,106] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-05-09 01:31:06,161] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-05-09 01:31:06,742] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-05-09 01:31:07,087] [pool-1-thread-11] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-05-09 01:31:38,159] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-05-09 01:31:38,726] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-05-09 01:31:38,939] [pool-1-thread-4] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-05-09 01:31:39,013] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-05-09 01:31:39,073] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-05-09 01:31:39,642] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-05-09 01:31:39,733] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-05-09 01:31:39,972] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-05-09 01:31:40,801] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-05-09 01:31:40,997] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-05-09 01:31:41,031] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-05-09 01:31:41,127] [pool-1-thread-2] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-05-09 01:31:41,170] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-05-09 01:31:41,273] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-05-09 01:31:41,530] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-05-09 01:31:42,753] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-05-09 01:31:42,914] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-05-09 01:31:43,005] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-05-09 01:31:43,093] [pool-1-thread-4] Initializing /data/qa-17270/image1.oir:
[testng] [2024-05-09 01:31:43,177] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-05-09 01:31:44,033] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-05-09 01:31:44,088] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-05-09 01:31:44,345] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-05-09 01:31:44,561] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-05-09 01:31:44,698] [pool-1-thread-6] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-05-09 01:31:44,838] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-05-09 01:31:44,959] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-05-09 01:31:46,000] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-05-09 01:31:46,098] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-05-09 01:31:46,220] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-05-09 01:31:46,337] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-05-09 01:31:46,431] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-05-09 01:31:46,495] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-05-09 01:31:46,977] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-05-09 01:31:47,143] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-05-09 01:31:47,961] [pool-1-thread-7] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-05-09 01:31:48,008] [pool-1-thread-12] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-05-09 01:31:48,411] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-05-09 01:31:48,860] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-05-09 01:31:49,648] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-05-09 01:31:49,844] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-05-09 01:31:50,288] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-05-09 01:31:50,425] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-05-09 01:31:50,954] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-05-09 01:31:51,301] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-05-09 01:31:51,705] [pool-1-thread-7] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-05-09 01:31:52,489] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-05-09 01:31:53,292] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-05-09 01:31:54,314] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-05-09 01:31:54,384] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-05-09 01:31:54,472] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-05-09 01:31:54,686] [pool-1-thread-8] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-05-09 01:31:55,153] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-05-09 01:31:55,592] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-05-09 01:31:56,077] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-05-09 01:31:56,227] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-05-09 01:31:57,325] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-05-09 01:31:58,129] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-05-09 01:32:01,444] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-05-09 01:32:01,966] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-05-09 01:32:02,473] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-05-09 01:32:02,864] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-05-09 01:32:03,508] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-05-09 01:32:17,943] [pool-1-thread-6] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-05-09 01:32:18,096] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-05-09 01:32:18,642] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-05-09 01:32:18,707] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-05-09 01:32:19,440] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-05-09 01:32:19,867] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-05-09 01:32:20,089] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-05-09 01:32:20,755] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-05-09 01:32:20,926] [pool-1-thread-4] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-05-09 01:32:21,032] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-05-09 01:32:21,798] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-05-09 01:32:22,381] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-05-09 01:32:22,868] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-05-09 01:32:23,087] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-05-09 01:32:23,199] [pool-1-thread-4] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-05-09 01:32:23,268] [pool-1-thread-6] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-05-09 01:32:24,421] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-05-09 01:32:25,044] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-05-09 01:32:25,147] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-05-09 01:32:25,556] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-05-09 01:32:27,178] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-05-09 01:32:27,433] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-05-09 01:32:28,066] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-05-09 01:32:28,175] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-05-09 01:32:28,453] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-05-09 01:32:28,544] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-05-09 01:32:29,271] [pool-1-thread-8] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-05-09 01:32:29,477] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-05-09 01:32:29,552] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-05-09 01:32:30,106] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-05-09 01:32:30,191] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-05-09 01:32:30,737] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-05-09 01:32:30,996] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-05-09 01:32:31,281] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-05-09 01:32:31,582] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-05-09 01:32:32,020] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-05-09 01:32:32,258] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-05-09 01:32:32,913] [pool-1-thread-6] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-05-09 01:34:37,305] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-05-09 01:34:37,346] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-05-09 01:34:37,782] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-05-09 01:34:38,023] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-05-09 01:34:40,613] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-05-09 01:34:40,825] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-05-09 01:34:41,403] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-05-09 01:34:41,854] [pool-1-thread-4] Initializing /data/qa-17335/1.oir:
[testng] [2024-05-09 01:34:42,062] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-05-09 01:34:49,652] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-05-09 01:34:53,383] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-05-09 01:34:53,600] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-05-09 01:34:54,382] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-05-09 01:34:55,151] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-05-09 01:34:55,716] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-05-09 01:34:55,979] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-05-09 01:34:57,384] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-05-09 01:34:57,980] [pool-1-thread-7] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-05-09 01:34:58,082] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-05-09 01:34:58,738] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-05-09 01:34:59,567] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-05-09 01:35:00,015] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-05-09 01:35:00,126] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-05-09 01:35:01,146] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-05-09 01:35:01,435] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-05-09 01:35:02,258] [pool-1-thread-12] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-05-09 01:35:02,524] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-05-09 01:35:03,097] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-05-09 01:35:06,625] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-05-09 01:35:06,822] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-05-09 01:35:07,622] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] [2024-05-09 01:35:07,944] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-05-09 01:35:08,084] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-05-09 01:35:09,167] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-05-09 01:35:09,278] [pool-1-thread-7] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-05-09 01:35:09,772] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-05-09 01:35:10,418] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-05-09 01:35:10,583] [pool-1-thread-7] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-05-09 01:35:10,797] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-05-09 01:35:11,315] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-05-09 01:35:12,324] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-05-09 01:35:13,738] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-05-09 01:35:14,089] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-05-09 01:35:14,904] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-05-09 01:35:15,122] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-05-09 01:35:15,662] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-05-09 01:35:16,635] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-05-09 01:35:17,028] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-05-09 01:35:17,389] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-05-09 01:35:17,883] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-05-09 01:35:18,538] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 60 minutes 36 seconds
Finished: SUCCESS