Started by upstream project "BIOFORMATS-test-repo" build number 60
originally caused by:
Started by upstream project "Trigger" build number 67
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11077413755695996113.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_8840_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] WARNING: An illegal reflective access operation has occurred
[testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
[testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
[testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
[testng] WARNING: All illegal access operations will be denied in a future release
[testng] File leak detector installed
[testng] 01:21:19,930 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:19,932 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
[testng] 01:21:19,932 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:19,933 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:19,934 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:19,934 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:19,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:19,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:19,935 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:19,936 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:19,937 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:19,937 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:20,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:20,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:20,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:20,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:20,187 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:20,188 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:20,188 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:20,188 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:20,188 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
[testng] 01:21:20,189 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
[testng] 01:21:20,189 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 254 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-11 01:21:20,202] [main] java.version = 11.0.16
[testng] 01:21:20,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:20,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:20,263 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-11_01-21-20.log]
[testng] 01:21:20,265 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
[testng] [2024-05-11 01:21:20,268] [main] testng.directory = /data
[testng] [2024-05-11 01:21:20,268] [main] testng.configDirectory = /config
[testng] [2024-05-11 01:21:20,281] [main] testng.multiplier = 1.0
[testng] [2024-05-11 01:21:20,282] [main] testng.in-memory = false
[testng] [2024-05-11 01:21:20,282] [main] testng.allow-missing = false
[testng] [2024-05-11 01:21:20,282] [main] user.language = en
[testng] [2024-05-11 01:21:20,282] [main] user.country = ${user.country}
[testng] [2024-05-11 01:21:20,283] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-05-11 01:21:36,160] [main] ----------------------------------------
[testng] [2024-05-11 01:21:36,161] [main] Total files: 283
[testng] [2024-05-11 01:21:36,161] [main] Scan time: 15.877 s (56 ms/file)
[testng] [2024-05-11 01:21:36,161] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-11 01:29:57,167] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] 01:29:57,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:29:57,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,170 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-11_01-29-57.log]
[testng] 01:29:57,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@251819c6 - End of configuration.
[testng] [2024-05-11 01:29:57,627] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] 01:29:57,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:29:57,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-11_01-29-57.log]
[testng] 01:29:57,628 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1177379a - End of configuration.
[testng] [2024-05-11 01:29:57,726] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] 01:29:57,727 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:29:57,727 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-11_01-29-57.log]
[testng] 01:29:57,728 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44fa9dc5 - End of configuration.
[testng] [2024-05-11 01:29:57,954] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] 01:29:57,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:29:57,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:57,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-11_01-29-57.log]
[testng] 01:29:57,955 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4813a673 - End of configuration.
[testng] [2024-05-11 01:29:58,024] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:29:58,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:29:58,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,025 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-11_01-29-58.log]
[testng] 01:29:58,025 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fa0b797 - End of configuration.
[testng] [2024-05-11 01:29:58,053] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:29:58,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:29:58,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-11_01-29-58.log]
[testng] 01:29:58,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c1abe9b - End of configuration.
[testng] [2024-05-11 01:29:58,101] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] 01:29:58,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:29:58,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-11_01-29-58.log]
[testng] 01:29:58,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48a23e9c - End of configuration.
[testng] [2024-05-11 01:29:58,361] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] 01:29:58,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:29:58,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-11_01-29-58.log]
[testng] 01:29:58,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@677a3755 - End of configuration.
[testng] [2024-05-11 01:29:58,489] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] 01:29:58,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:29:58,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-11_01-29-58.log]
[testng] 01:29:58,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b0e4bca - End of configuration.
[testng] [2024-05-11 01:29:58,568] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] 01:29:58,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:29:58,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:58,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-11_01-29-58.log]
[testng] 01:29:58,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49155cd1 - End of configuration.
[testng] [2024-05-11 01:30:01,501] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] 01:30:01,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:30:01,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:01,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-11_01-30-01.log]
[testng] 01:30:01,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@247667e2 - End of configuration.
[testng] [2024-05-11 01:30:01,584] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] 01:30:01,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:30:01,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:30:01,585 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-11_01-30-01.log]
[testng] 01:30:01,586 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2010f946 - End of configuration.
[testng] [2024-05-11 01:30:05,052] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-05-11 01:30:05,103] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-05-11 01:30:05,171] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-05-11 01:30:05,384] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-05-11 01:30:05,461] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-05-11 01:30:05,519] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-05-11 01:30:06,077] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-05-11 01:30:06,124] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-05-11 01:30:06,178] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-05-11 01:30:06,517] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-05-11 01:30:06,850] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-05-11 01:30:07,771] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-05-11 01:30:08,086] [pool-1-thread-3] Initializing /data/qa-17919/f10187.oir:
[testng] [2024-05-11 01:30:24,577] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-05-11 01:30:25,111] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-05-11 01:30:25,199] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-05-11 01:30:25,282] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-05-11 01:30:25,361] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-05-11 01:30:25,550] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-05-11 01:30:26,293] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-05-11 01:30:26,509] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-05-11 01:30:26,666] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-05-11 01:30:26,775] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-05-11 01:30:27,133] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] [2024-05-11 01:30:27,306] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-05-11 01:30:28,675] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-05-11 01:30:28,839] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-05-11 01:30:28,998] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-05-11 01:30:33,114] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-05-11 01:30:33,539] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-05-11 01:30:33,957] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-05-11 01:30:34,034] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-05-11 01:30:34,454] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-05-11 01:30:34,581] [pool-1-thread-10] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-05-11 01:30:34,648] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng] [2024-05-11 01:30:34,734] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-05-11 01:30:35,262] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-05-11 01:30:35,559] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-05-11 01:30:35,797] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-05-11 01:30:36,626] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-05-11 01:30:36,822] [pool-1-thread-10] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-05-11 01:30:37,180] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-05-11 01:30:37,399] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-05-11 01:30:40,619] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-05-11 01:30:40,738] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] [2024-05-11 01:30:41,149] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir:
[testng] [2024-05-11 01:30:42,621] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-05-11 01:30:43,137] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-05-11 01:30:43,872] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-05-11 01:30:44,268] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] [2024-05-11 01:30:44,347] [pool-1-thread-12] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-05-11 01:30:44,690] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-05-11 01:30:44,803] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-05-11 01:30:45,038] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-05-11 01:30:45,342] [pool-1-thread-10] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-05-11 01:30:45,857] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-05-11 01:30:46,097] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-05-11 01:30:46,269] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-05-11 01:30:46,405] [pool-1-thread-12] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-05-11 01:30:46,555] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-05-11 01:30:46,904] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] [2024-05-11 01:30:47,009] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-05-11 01:30:48,791] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-05-11 01:30:49,003] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-05-11 01:30:49,126] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-05-11 01:30:49,376] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-05-11 01:30:49,655] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-05-11 01:30:49,989] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-05-11 01:30:50,147] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-05-11 01:30:50,274] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] [2024-05-11 01:30:50,646] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-05-11 01:30:51,191] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-05-11 01:30:51,245] [pool-1-thread-12] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-05-11 01:30:51,361] [pool-1-thread-1] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-05-11 01:30:51,618] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-05-11 01:30:52,298] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-05-11 01:30:52,725] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-05-11 01:30:52,919] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-05-11 01:30:53,983] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-05-11 01:30:54,041] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-05-11 01:30:54,696] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-05-11 01:30:55,308] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-05-11 01:30:58,870] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-05-11 01:30:59,050] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-05-11 01:30:59,124] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-05-11 01:31:00,067] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-05-11 01:31:00,337] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-05-11 01:31:00,514] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir:
[testng] [2024-05-11 01:31:00,744] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-05-11 01:31:01,276] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-05-11 01:31:01,359] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-05-11 01:31:01,793] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-05-11 01:31:02,625] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-05-11 01:31:02,974] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-05-11 01:31:03,094] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-05-11 01:31:03,277] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-05-11 01:31:03,322] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-05-11 01:31:05,508] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-05-11 01:31:06,294] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-05-11 01:31:51,110] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-05-11 01:31:51,626] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-05-11 01:31:51,803] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-05-11 01:31:52,280] [pool-1-thread-7] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-05-11 01:31:52,511] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-05-11 01:31:52,658] [pool-1-thread-10] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-05-11 01:32:11,557] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-05-11 01:32:11,728] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-05-11 01:32:11,980] [pool-1-thread-5] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-05-11 01:32:12,344] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-05-11 01:32:12,681] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-05-11 01:32:12,848] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] [2024-05-11 01:32:13,102] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-05-11 01:32:13,595] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-05-11 01:32:14,098] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-05-11 01:32:14,391] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-05-11 01:32:14,516] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-05-11 01:32:15,329] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-05-11 01:32:40,689] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-05-11 01:32:40,916] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-05-11 01:32:41,153] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] [2024-05-11 01:32:41,496] [pool-1-thread-6] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-05-11 01:32:42,248] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-05-11 01:32:42,664] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-05-11 01:32:42,767] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-05-11 01:32:44,207] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-05-11 01:32:44,641] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-05-11 01:32:45,324] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-05-11 01:32:46,119] [pool-1-thread-4] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-05-11 01:32:46,371] [pool-1-thread-5] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-05-11 01:32:46,426] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-05-11 01:32:47,780] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-05-11 01:32:47,978] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-05-11 01:32:48,108] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-05-11 01:32:48,990] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-05-11 01:32:49,705] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-05-11 01:32:50,123] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-05-11 01:32:50,861] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-05-11 01:32:51,258] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-05-11 01:32:51,447] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-05-11 01:32:51,926] [pool-1-thread-4] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-05-11 01:32:52,678] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-05-11 01:32:52,837] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-05-11 01:32:53,123] [pool-1-thread-6] Initializing /data/qa-17335/1.oir:
[testng] [2024-05-11 01:32:53,245] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-05-11 01:32:53,553] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-05-11 01:32:53,684] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-05-11 01:32:54,067] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-05-11 01:32:54,678] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-05-11 01:32:54,964] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-05-11 01:32:55,033] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-05-11 01:32:55,418] [pool-1-thread-5] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-05-11 01:32:55,881] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-05-11 01:32:55,942] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-05-11 01:32:56,188] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-05-11 01:32:56,627] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-05-11 01:32:56,860] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-05-11 01:32:57,146] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-05-11 01:32:57,307] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-05-11 01:32:57,801] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-05-11 01:32:58,098] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-05-11 01:32:58,625] [pool-1-thread-6] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-05-11 01:32:58,995] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-05-11 01:32:59,205] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-05-11 01:32:59,287] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-05-11 01:33:00,169] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-05-11 01:33:00,762] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-05-11 01:33:01,138] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-05-11 01:33:01,202] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-05-11 01:33:01,367] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-05-11 01:33:01,425] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-05-11 01:33:06,538] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-05-11 01:33:06,586] [pool-1-thread-2] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-05-11 01:33:06,645] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] [2024-05-11 01:33:06,784] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 45 minutes 21 seconds
Finished: SUCCESS