Started by upstream project "BIOFORMATS-test-repo" build number 61
originally caused by:
Started by upstream project "Trigger" build number 68
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins13440564659573420381.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_9004_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] 1 warning
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:21:10,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:21:10,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
[testng] 01:21:10,275 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:10,276 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:21:10,277 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:21:10,277 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:21:10,278 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:21:10,278 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:10,278 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:21:10,279 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:21:10,280 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:21:10,280 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:21:10,521 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:21:10,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:21:10,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:21:10,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:21:10,564 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:21:10,564 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:21:10,565 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:21:10,565 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:21:10,565 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
[testng] 01:21:10,566 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
[testng] 01:21:10,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 289 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-12 01:21:10,581] [main] java.version = 17.0.2
[testng] 01:21:10,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:21:10,586 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:21:10,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-12_01-21-10.log]
[testng] 01:21:10,637 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
[testng] [2024-05-12 01:21:10,640] [main] testng.directory = /data
[testng] [2024-05-12 01:21:10,641] [main] testng.configDirectory = /config
[testng] [2024-05-12 01:21:10,655] [main] testng.multiplier = 1.0
[testng] [2024-05-12 01:21:10,656] [main] testng.in-memory = false
[testng] [2024-05-12 01:21:10,657] [main] testng.allow-missing = false
[testng] [2024-05-12 01:21:10,657] [main] user.language = en
[testng] [2024-05-12 01:21:10,657] [main] user.country = ${user.country}
[testng] [2024-05-12 01:21:10,657] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-05-12 01:21:27,504] [main] ----------------------------------------
[testng] [2024-05-12 01:21:27,504] [main] Total files: 283
[testng] [2024-05-12 01:21:27,504] [main] Scan time: 16.847 s (59 ms/file)
[testng] [2024-05-12 01:21:27,504] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 186 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-12 01:29:08,743] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif:
[testng] 01:29:08,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:29:08,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:08,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-12_01-29-08.log]
[testng] 01:29:08,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52f0837e - End of configuration.
[testng] [2024-05-12 01:29:08,797] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif:
[testng] 01:29:08,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:29:08,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:08,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-12_01-29-08.log]
[testng] 01:29:08,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@759d77a5 - End of configuration.
[testng] [2024-05-12 01:29:08,882] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif:
[testng] 01:29:08,882 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:29:08,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:08,883 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-12_01-29-08.log]
[testng] 01:29:08,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b32ab7f - End of configuration.
[testng] [2024-05-12 01:29:08,947] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir:
[testng] 01:29:08,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:29:08,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:08,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-12_01-29-08.log]
[testng] 01:29:08,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f65e4f6 - End of configuration.
[testng] [2024-05-12 01:29:09,037] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif:
[testng] 01:29:09,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:29:09,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-12_01-29-09.log]
[testng] 01:29:09,038 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60086230 - End of configuration.
[testng] [2024-05-12 01:29:09,122] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir:
[testng] 01:29:09,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:29:09,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,123 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-12_01-29-09.log]
[testng] 01:29:09,123 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37af0d6a - End of configuration.
[testng] [2024-05-12 01:29:09,184] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir:
[testng] 01:29:09,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:29:09,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:09,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-12_01-29-09.log]
[testng] 01:29:09,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@665176a - End of configuration.
[testng] [2024-05-12 01:29:25,398] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif:
[testng] 01:29:25,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:29:25,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:25,400 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-12_01-29-25.log]
[testng] 01:29:25,400 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b333e5 - End of configuration.
[testng] [2024-05-12 01:29:25,445] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets:
[testng] 01:29:25,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:29:25,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:25,446 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-12_01-29-25.log]
[testng] 01:29:25,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12763ab0 - End of configuration.
[testng] [2024-05-12 01:29:25,468] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif:
[testng] 01:29:25,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:29:25,468 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:25,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-12_01-29-25.log]
[testng] 01:29:25,469 |-INFO in ch.qos.logback.core.sift.SiftProcessor@700cdb01 - End of configuration.
[testng] [2024-05-12 01:29:25,559] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif:
[testng] 01:29:25,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:29:25,559 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:25,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-12_01-29-25.log]
[testng] 01:29:25,560 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58204d5e - End of configuration.
[testng] [2024-05-12 01:29:25,604] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif:
[testng] 01:29:25,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:29:25,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:29:25,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-12_01-29-25.log]
[testng] 01:29:25,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@241ab076 - End of configuration.
[testng] [2024-05-12 01:29:28,026] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir:
[testng] [2024-05-12 01:29:28,187] [pool-1-thread-1] Initializing /data/qa-17270/stack1.oir:
[testng] [2024-05-12 01:29:29,476] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir:
[testng] [2024-05-12 01:29:29,646] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir:
[testng] [2024-05-12 01:29:30,056] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif:
[testng] [2024-05-12 01:29:30,135] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif:
[testng] [2024-05-12 01:29:30,189] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.vsi:
[testng] [2024-05-12 01:29:30,217] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif:
[testng] [2024-05-12 01:29:30,312] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-alexa488.tif:
[testng] [2024-05-12 01:29:30,805] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir:
[testng] [2024-05-12 01:29:30,895] [pool-1-thread-12] Initializing /data/olympus/XYZt.vsi:
[testng] [2024-05-12 01:29:32,217] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif:
[testng] [2024-05-12 01:29:32,297] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif:
[testng] [2024-05-12 01:29:32,417] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.oir:
[testng] [2024-05-12 01:29:32,623] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif:
[testng] [2024-05-12 01:29:32,736] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.ome.tif:
[testng] [2024-05-12 01:29:32,841] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir:
[testng] [2024-05-12 01:30:51,162] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-venus stack.tif:
[testng] [2024-05-12 01:30:51,445] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif:
[testng] [2024-05-12 01:30:52,164] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif:
[testng] [2024-05-12 01:30:52,314] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir:
[testng] [2024-05-12 01:30:52,444] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif:
[testng] [2024-05-12 01:30:52,521] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif:
[testng] [2024-05-12 01:30:52,711] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif:
[testng] [2024-05-12 01:30:52,933] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif:
[testng] [2024-05-12 01:30:53,057] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png:
[testng] [2024-05-12 01:30:53,300] [pool-1-thread-6] Initializing /data/cudmore/20190401__0005.oir:
[testng] [2024-05-12 01:30:57,578] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.oir:
[testng] [2024-05-12 01:30:58,194] [pool-1-thread-12] Initializing /data/qa-21508/Stitch_A01_G008.oir:
[testng] [2024-05-12 01:30:58,262] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif:
[testng] [2024-05-12 01:30:58,442] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir:
[testng] [2024-05-12 01:30:58,734] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/Clipboard.tif:
[testng] [2024-05-12 01:30:58,907] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir:
[testng] [2024-05-12 01:31:00,304] [pool-1-thread-4] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir:
[testng] [2024-05-12 01:31:01,105] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif:
[testng] [2024-05-12 01:31:01,169] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.oir:
[testng] [2024-05-12 01:31:01,296] [pool-1-thread-10] Initializing /data/qa-17331/60x zstack RS.oir:
[testng] [2024-05-12 01:31:02,154] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.oir:
[testng] [2024-05-12 01:31:02,269] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir:
[testng] [2024-05-12 01:31:02,606] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir:
[testng] [2024-05-12 01:31:03,379] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir:
[testng] [2024-05-12 01:31:04,141] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.oir:
[testng] [2024-05-12 01:31:04,625] [pool-1-thread-9] Initializing /data/qa-17270/image1.ome.tif:
[testng] [2024-05-12 01:31:04,685] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif:
[testng] [2024-05-12 01:31:04,763] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif:
[testng] [2024-05-12 01:31:05,419] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif:
[testng] [2024-05-12 01:31:05,488] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir:
[testng] [2024-05-12 01:31:05,578] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif:
[testng] [2024-05-12 01:31:06,536] [pool-1-thread-11] Initializing /data/qa-17270/stack1.ome.tif:
[testng] [2024-05-12 01:31:06,794] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif:
[testng] [2024-05-12 01:31:06,833] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif:
[testng] [2024-05-12 01:31:06,895] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir:
[testng] [2024-05-12 01:31:07,007] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir:
[testng] [2024-05-12 01:31:07,428] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir:
[testng] [2024-05-12 01:31:07,526] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir:
[testng] [2024-05-12 01:31:08,041] [pool-1-thread-2] Initializing /data/qa-17917/f10010.oir:
[testng] [2024-05-12 01:31:32,557] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif:
[testng] [2024-05-12 01:31:32,651] [pool-1-thread-4] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir:
[testng] [2024-05-12 01:31:32,824] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir:
[testng] [2024-05-12 01:31:32,946] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-stack1.tif:
[testng] [2024-05-12 01:31:33,012] [pool-1-thread-11] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir:
[testng] [2024-05-12 01:31:33,689] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir:
[testng] [2024-05-12 01:31:33,910] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif:
[testng] [2024-05-12 01:31:34,796] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif:
[testng] [2024-05-12 01:31:34,842] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif:
[testng] [2024-05-12 01:31:34,884] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.oir:
[testng] [2024-05-12 01:31:35,077] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.ome.tif:
[testng] [2024-05-12 01:31:35,173] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.oir:
[testng] [2024-05-12 01:31:35,717] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir:
[testng] [2024-05-12 01:31:35,934] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi:
[testng] [2024-05-12 01:31:36,277] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi:
[testng] [2024-05-12 01:31:36,292] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif:
[testng] [2024-05-12 01:31:36,438] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif:
[testng] [2024-05-12 01:31:36,677] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2.oir:
[testng] [2024-05-12 01:31:36,837] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001.oir:
[testng] [2024-05-12 01:31:37,559] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif:
[testng] [2024-05-12 01:31:37,914] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif:
[testng] [2024-05-12 01:31:38,091] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif:
[testng] [2024-05-12 01:31:38,257] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir:
[testng] [2024-05-12 01:31:38,521] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif:
[testng] [2024-05-12 01:31:38,791] [pool-1-thread-4] Initializing /data/qa-17293/Clipboard.tif:
[testng] [2024-05-12 01:31:39,047] [pool-1-thread-1] Initializing /data/qa-17335/1.oir:
[testng] [2024-05-12 01:31:39,112] [pool-1-thread-10] Initializing /data/olympus/XYZt.ome.tif:
[testng] [2024-05-12 01:31:39,288] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif:
[testng] [2024-05-12 01:31:39,405] [pool-1-thread-9] Initializing /data/qa-17293/2-z-t_0001_LSM.oir:
[testng] [2024-05-12 01:31:39,917] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir:
[testng] [2024-05-12 01:31:41,150] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif:
[testng] [2024-05-12 01:31:41,431] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif:
[testng] [2024-05-12 01:31:41,572] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.ome.tif:
[testng] [2024-05-12 01:31:41,772] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-image1.tif:
[testng] [2024-05-12 01:31:42,460] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir:
[testng] [2024-05-12 01:31:42,647] [pool-1-thread-4] Initializing /data/qa-17922/example_multipart.oir:
[testng] [2024-05-12 01:32:00,942] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir:
[testng] [2024-05-12 01:32:04,527] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets:
[testng] [2024-05-12 01:32:04,686] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif:
[testng] [2024-05-12 01:32:04,800] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif:
[testng] [2024-05-12 01:32:04,939] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir:
[testng] [2024-05-12 01:32:05,389] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif:
[testng] [2024-05-12 01:32:05,858] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.oir:
[testng] [2024-05-12 01:32:06,035] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.oir:
[testng] [2024-05-12 01:32:06,434] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif:
[testng] [2024-05-12 01:32:06,572] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.oir:
[testng] [2024-05-12 01:32:07,006] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif:
[testng] [2024-05-12 01:32:07,303] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir:
[testng] [2024-05-12 01:32:07,834] [pool-1-thread-10] Initializing /data/qa-17331/Clipboard.tif:
[testng] [2024-05-12 01:32:07,918] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif:
[testng] [2024-05-12 01:32:08,281] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir:
[testng] [2024-05-12 01:32:08,809] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif:
[testng] [2024-05-12 01:32:09,465] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir:
[testng] [2024-05-12 01:32:09,976] [pool-1-thread-12] Initializing /data/olympus/Clipboard-XYZt.tif:
[testng] [2024-05-12 01:32:10,386] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif:
[testng] [2024-05-12 01:32:10,439] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif:
[testng] [2024-05-12 01:32:11,259] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir:
[testng] [2024-05-12 01:32:11,585] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif:
[testng] [2024-05-12 01:32:11,780] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi:
[testng] [2024-05-12 01:32:12,047] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif:
[testng] [2024-05-12 01:32:12,396] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.ome.tif:
[testng] [2024-05-12 01:32:12,710] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif:
[testng] [2024-05-12 01:32:12,941] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif:
[testng] [2024-05-12 01:32:13,383] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif:
[testng] [2024-05-12 01:32:13,502] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/Clipboard.tif:
[testng] [2024-05-12 01:32:13,944] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir:
[testng] [2024-05-12 01:32:14,166] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif:
[testng] [2024-05-12 01:32:14,239] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif:
[testng] [2024-05-12 01:32:14,393] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif:
[testng] [2024-05-12 01:32:14,890] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info:
[testng] [2024-05-12 01:32:15,079] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir:
[testng] [2024-05-12 01:32:15,181] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir:
[testng] [2024-05-12 01:32:15,509] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.oir:
[testng] [2024-05-12 01:32:15,777] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir:
[testng] [2024-05-12 01:32:16,271] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info:
[testng] [2024-05-12 01:32:18,904] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif:
[testng] [2024-05-12 01:32:19,092] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif:
[testng] [2024-05-12 01:32:19,168] [pool-1-thread-10] Initializing /data/qa-17335/1.ome.tif:
[testng] [2024-05-12 01:32:19,650] [pool-1-thread-11] Initializing /data/olympus/calcium sparks.jpg:
[testng] [2024-05-12 01:32:19,748] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif:
[testng] [2024-05-12 01:32:20,378] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif:
[testng] [2024-05-12 01:32:20,499] [pool-1-thread-10] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir:
[testng] [2024-05-12 01:32:20,896] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.oir:
[testng] [2024-05-12 01:32:21,167] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif:
[testng] [2024-05-12 01:32:21,494] [pool-1-thread-12] Initializing /data/qa-16871/Clipboard.tif:
[testng] [2024-05-12 01:32:22,487] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif:
[testng] [2024-05-12 01:32:22,669] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir:
[testng] [2024-05-12 01:32:26,300] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-1.tif:
[testng] [2024-05-12 01:32:26,509] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif:
[testng] [2024-05-12 01:32:27,484] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir:
[testng] [2024-05-12 01:32:27,683] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif:
[testng] [2024-05-12 01:32:27,744] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif:
[testng] [2024-05-12 01:32:27,819] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif:
[testng] [2024-05-12 01:32:28,861] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir:
[testng] [2024-05-12 01:32:28,951] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif:
[testng] [2024-05-12 01:32:29,208] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir:
[testng] [2024-05-12 01:32:29,951] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif:
[testng] [2024-05-12 01:32:30,574] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif:
[testng] [2024-05-12 01:32:30,837] [pool-1-thread-1] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif:
[testng] [2024-05-12 01:32:30,941] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/zebra shg.oir:
[testng] [2024-05-12 01:32:32,957] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2.ome.tif:
[testng] [2024-05-12 01:32:33,347] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir:
[testng] [2024-05-12 01:32:33,661] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.ome.tif:
[testng] [2024-05-12 01:32:34,591] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif:
[testng] [2024-05-12 01:32:34,667] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info:
[testng] [2024-05-12 01:32:37,626] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info:
[testng] [2024-05-12 01:32:39,483] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif:
[testng] [2024-05-12 01:32:39,577] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.ome.tif:
[testng] [2024-05-12 01:32:40,635] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif:
[testng] [2024-05-12 01:32:41,290] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir:
[testng] [2024-05-12 01:32:41,776] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.oir:
[testng] [2024-05-12 01:32:42,020] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi:
[testng] [2024-05-12 01:32:43,368] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.ome.tif:
[testng] [2024-05-12 01:32:43,765] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.vsi:
[testng] [2024-05-12 01:32:44,463] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif:
[testng] [2024-05-12 01:32:45,198] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif:
[testng] [2024-05-12 01:32:45,867] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir:
[testng] [2024-05-12 01:32:46,612] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 9858, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 47 minutes 22 seconds
Finished: SUCCESS