Started by upstream project "BIOFORMATS-test-repo" build number 62
originally caused by:
 Started by upstream project "Trigger" build number 69
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins11228640963314553893.sh
+ '[' imagepro = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_9315_merge_ci -v /uod/idr/repos/curated/imagepro:/data -v /uod/idr-scratch/merge-ci/curated/imagepro:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 02:56:01,069 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 02:56:01,071 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service.
   [testng] 02:56:01,071 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:56:01,072 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:56:01,072 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:56:01,072 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:56:01,072 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:56:01,072 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:56:01,073 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:56:01,073 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:56:01,073 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:56:01,073 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:56:01,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:56:01,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:56:01,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:56:01,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:56:01,366 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:56:01,366 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:56:01,366 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:56:01,366 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:56:01,366 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration.
   [testng] 02:56:01,367 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point
   [testng] 02:56:01,367 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 294 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-13 02:56:01,378] [main] java.version = 1.8.0_342
   [testng] 02:56:01,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:56:01,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:01,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-13_02-56-01.log]
   [testng] 02:56:01,431 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-05-13 02:56:01,433] [main] testng.directory = /data
   [testng] [2024-05-13 02:56:01,433] [main] testng.configDirectory = /config
   [testng] [2024-05-13 02:56:01,446] [main] testng.multiplier = 1.0
   [testng] [2024-05-13 02:56:01,447] [main] testng.in-memory = false
   [testng] [2024-05-13 02:56:01,447] [main] testng.allow-missing = false
   [testng] [2024-05-13 02:56:01,447] [main] user.language = fr
   [testng] [2024-05-13 02:56:01,447] [main] user.country = FR
   [testng] [2024-05-13 02:56:01,447] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-05-13 02:56:02,633] [main] ----------------------------------------
   [testng] [2024-05-13 02:56:02,634] [main] Total files: 22
   [testng] [2024-05-13 02:56:02,635] [main] Scan time: 1.186 s (53 ms/file)
   [testng] [2024-05-13 02:56:02,636] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 21 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-13 02:56:10,796] [pool-1-thread-1] Initializing /data/converted/clown8c.seq: 
   [testng] 02:56:10,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 02:56:10,797 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:10,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-13_02-56-10.log]
   [testng] 02:56:10,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f93bf6a - End of configuration.
   [testng] [2024-05-13 02:56:10,840] [pool-1-thread-12] Initializing /data/converted/NESb_C2_TP7.seq: 
   [testng] 02:56:10,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 02:56:10,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:10,841 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-13_02-56-10.log]
   [testng] 02:56:10,841 |-INFO in ch.qos.logback.core.sift.SiftProcessor@159df228 - End of configuration.
   [testng] [2024-05-13 02:56:10,875] [pool-1-thread-11] Initializing /data/converted/mitosis-test.tif: 
   [testng] 02:56:10,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 02:56:10,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:10,876 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-13_02-56-10.log]
   [testng] 02:56:10,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5049dc26 - End of configuration.
   [testng] [2024-05-13 02:56:10,994] [pool-1-thread-10] Initializing /data/converted/clown.seq: 
   [testng] 02:56:10,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 02:56:10,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:10,995 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-13_02-56-10.log]
   [testng] 02:56:10,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@693c9e21 - End of configuration.
   [testng] [2024-05-13 02:56:11,011] [pool-1-thread-9] Initializing /data/alex/AFAset0003.ips: 
   [testng] 02:56:11,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 02:56:11,011 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-13_02-56-11.log]
   [testng] 02:56:11,012 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50e86961 - End of configuration.
   [testng] [2024-05-13 02:56:11,023] [pool-1-thread-8] Initializing /data/converted/NESb_C2_TP7.tiff: 
   [testng] 02:56:11,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 02:56:11,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,024 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-13_02-56-11.log]
   [testng] 02:56:11,024 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a1a74bf - End of configuration.
   [testng] [2024-05-13 02:56:11,086] [pool-1-thread-7] Initializing /data/samples/PROBE.TIF: 
   [testng] 02:56:11,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 02:56:11,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-13_02-56-11.log]
   [testng] 02:56:11,088 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63044bd - End of configuration.
   [testng] [2024-05-13 02:56:11,104] [pool-1-thread-6] Initializing /data/converted/dub01.ipw: 
   [testng] 02:56:11,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 02:56:11,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-13_02-56-11.log]
   [testng] 02:56:11,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1807f894 - End of configuration.
   [testng] [2024-05-13 02:56:11,139] [pool-1-thread-5] Initializing /data/converted/NESb_C2_TP7.ipw: 
   [testng] 02:56:11,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 02:56:11,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,140 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-13_02-56-11.log]
   [testng] 02:56:11,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f181f7 - End of configuration.
   [testng] [2024-05-13 02:56:11,178] [pool-1-thread-4] Initializing /data/xiuwen/head2.seq: 
   [testng] 02:56:11,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 02:56:11,178 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,179 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-13_02-56-11.log]
   [testng] 02:56:11,180 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71ba798f - End of configuration.
   [testng] [2024-05-13 02:56:11,276] [pool-1-thread-3] Initializing /data/converted/clown8c.ipw: 
   [testng] 02:56:11,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 02:56:11,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,277 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-13_02-56-11.log]
   [testng] 02:56:11,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@214593ca - End of configuration.
   [testng] [2024-05-13 02:56:11,294] [pool-1-thread-2] Initializing /data/converted/dub01.seq: 
   [testng] 02:56:11,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 02:56:11,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:56:11,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-13_02-56-11.log]
   [testng] 02:56:11,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b07596 - End of configuration.
   [testng] [2024-05-13 02:56:12,990] [pool-1-thread-10] Initializing /data/converted/dub01.pic: 
   [testng] [2024-05-13 02:56:13,020] [pool-1-thread-1] Initializing /data/converted/clown.ipw: 
   [testng] [2024-05-13 02:56:13,037] [pool-1-thread-3] Initializing /data/samples/HEART.SEQ: 
   [testng] [2024-05-13 02:56:13,065] [pool-1-thread-7] Initializing /data/converted/mitosis-test.ipw: 
   [testng] [2024-05-13 02:56:13,098] [pool-1-thread-2] Initializing /data/converted/clown8c.tif: 
   [testng] [2024-05-13 02:56:13,133] [pool-1-thread-6] Initializing /data/samples/TISSUE.TIF: 
   [testng] [2024-05-13 02:56:13,222] [pool-1-thread-12] Initializing /data/converted/clown.tif: 
   [testng] [2024-05-13 02:56:13,282] [pool-1-thread-5] Initializing /data/samples/FLDUAL.TIF: 
   [testng] [2024-05-13 02:56:13,490] [pool-1-thread-8] Initializing /data/converted/mitosis-test.seq: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1113, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 30 seconds
Finished: SUCCESS