Started by upstream project "BIOFORMATS-test-repo" build number 65
originally caused by:
Started by upstream project "Trigger" build number 72
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins9413720927342868213.sh
+ '[' fei = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_9677_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 01:24:03,884 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 01:24:03,886 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
[testng] 01:24:03,886 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:03,887 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 01:24:03,888 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 01:24:03,888 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 01:24:03,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 01:24:03,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:03,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 01:24:03,890 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 01:24:03,891 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 01:24:03,891 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 01:24:04,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 01:24:04,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 01:24:04,153 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 01:24:04,153 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 01:24:04,162 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 01:24:04,162 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 01:24:04,162 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 01:24:04,163 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 01:24:04,163 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
[testng] 01:24:04,164 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
[testng] 01:24:04,164 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 275 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-16 01:24:04,177] [main] java.version = 21
[testng] 01:24:04,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 01:24:04,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:04,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-16_01-24-04.log]
[testng] 01:24:04,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
[testng] [2024-05-16 01:24:04,246] [main] testng.directory = /data
[testng] [2024-05-16 01:24:04,246] [main] testng.configDirectory = /config
[testng] [2024-05-16 01:24:04,261] [main] testng.multiplier = 1.0
[testng] [2024-05-16 01:24:04,261] [main] testng.in-memory = false
[testng] [2024-05-16 01:24:04,261] [main] testng.allow-missing = false
[testng] [2024-05-16 01:24:04,261] [main] user.language = en
[testng] [2024-05-16 01:24:04,262] [main] user.country = ${user.country}
[testng] [2024-05-16 01:24:04,262] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-05-16 01:24:05,682] [main] ----------------------------------------
[testng] [2024-05-16 01:24:05,682] [main] Total files: 21
[testng] [2024-05-16 01:24:05,682] [main] Scan time: 1.42 s (67 ms/file)
[testng] [2024-05-16 01:24:05,682] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 18 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-16 01:24:07,420] [pool-1-thread-1] Initializing /data/steffen/Batman_008.tif:
[testng] 01:24:07,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 01:24:07,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-16_01-24-07.log]
[testng] 01:24:07,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14e08a56 - End of configuration.
[testng] [2024-05-16 01:24:07,465] [pool-1-thread-12] Initializing /data/venu/VENU02.IMG:
[testng] 01:24:07,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 01:24:07,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,467 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-16_01-24-07.log]
[testng] 01:24:07,467 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51e8ecea - End of configuration.
[testng] [2024-05-16 01:24:07,489] [pool-1-thread-11] Initializing /data/qa-11061/Tile_020-009-000_0.tif:
[testng] 01:24:07,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 01:24:07,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-16_01-24-07.log]
[testng] 01:24:07,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12b660cf - End of configuration.
[testng] [2024-05-16 01:24:07,568] [pool-1-thread-10] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif:
[testng] 01:24:07,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 01:24:07,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,570 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-16_01-24-07.log]
[testng] 01:24:07,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fc989cd - End of configuration.
[testng] [2024-05-16 01:24:07,630] [pool-1-thread-9] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif:
[testng] 01:24:07,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 01:24:07,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-16_01-24-07.log]
[testng] 01:24:07,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a4a7d84 - End of configuration.
[testng] [2024-05-16 01:24:07,669] [pool-1-thread-8] Initializing /data/venu/VENU01.IMG:
[testng] 01:24:07,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 01:24:07,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-16_01-24-07.log]
[testng] 01:24:07,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5617c1e3 - End of configuration.
[testng] [2024-05-16 01:24:07,694] [pool-1-thread-7] Initializing /data/antoine/Tile_001-002-000_0-000.tif:
[testng] 01:24:07,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 01:24:07,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-16_01-24-07.log]
[testng] 01:24:07,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c8dc665 - End of configuration.
[testng] [2024-05-16 01:24:07,778] [pool-1-thread-6] Initializing /data/venu/VENU02.TIF:
[testng] 01:24:07,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 01:24:07,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-16_01-24-07.log]
[testng] 01:24:07,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6614d - End of configuration.
[testng] [2024-05-16 01:24:07,849] [pool-1-thread-5] Initializing /data/venu/VENU_Five.TIF:
[testng] 01:24:07,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 01:24:07,850 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,851 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-16_01-24-07.log]
[testng] 01:24:07,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13880bfe - End of configuration.
[testng] [2024-05-16 01:24:07,892] [pool-1-thread-4] Initializing /data/venu/VENU01.TIF:
[testng] 01:24:07,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 01:24:07,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-16_01-24-07.log]
[testng] 01:24:07,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61af2656 - End of configuration.
[testng] [2024-05-16 01:24:07,968] [pool-1-thread-3] Initializing /data/venu/VENU_Six.TIF:
[testng] 01:24:07,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 01:24:07,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:07,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-16_01-24-07.log]
[testng] 01:24:07,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71aed8e6 - End of configuration.
[testng] [2024-05-16 01:24:08,007] [pool-1-thread-2] Initializing /data/venu/VENU_Four.TIF:
[testng] 01:24:08,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 01:24:08,008 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 01:24:08,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-16_01-24-08.log]
[testng] 01:24:08,009 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a75fe1d - End of configuration.
[testng] [2024-05-16 01:24:11,122] [pool-1-thread-9] Initializing /data/venu/VENU03.TIF:
[testng] [2024-05-16 01:24:11,218] [pool-1-thread-12] Initializing /data/venu/VENU_Eight.TIF:
[testng] [2024-05-16 01:24:11,291] [pool-1-thread-8] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif:
[testng] [2024-05-16 01:24:11,425] [pool-1-thread-10] Initializing /data/venu/VENU.TIF:
[testng] [2024-05-16 01:24:11,476] [pool-1-thread-4] Initializing /data/venu/VENU03.IMG:
[testng] [2024-05-16 01:24:11,511] [pool-1-thread-6] Initializing /data/venu/VENU_Seven.TIF:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 954, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 13 seconds
Finished: SUCCESS