Started by upstream project "BIOFORMATS-test-repo" build number 66
originally caused by:
Started by upstream project "Trigger" build number 74
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins13245941886566737976.sh
+ '[' inveon = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_9975_merge_ci -v /uod/idr/repos/curated/inveon:/data -v /uod/idr-scratch/merge-ci/curated/inveon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
test-automated:
[testng] File leak detector installed
[testng] 09:36:30,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 09:36:30,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 09:36:30,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 09:36:30,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 09:36:30,264 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 09:36:30,264 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 09:36:30,264 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 09:36:30,264 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 09:36:30,264 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
[testng] 09:36:30,278 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
[testng] 09:36:30,278 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 716 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-05-17 09:36:30,307] [main] java.version = 1.8.0_342
[testng] 09:36:30,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 09:36:30,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:36:30,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-17_09-36-30.log]
[testng] 09:36:30,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
[testng] [2024-05-17 09:36:30,687] [main] testng.directory = /data
[testng] [2024-05-17 09:36:30,687] [main] testng.configDirectory = /config
[testng] [2024-05-17 09:36:30,788] [main] testng.multiplier = 1.0
[testng] [2024-05-17 09:36:30,788] [main] testng.in-memory = false
[testng] [2024-05-17 09:36:30,788] [main] testng.allow-missing = false
[testng] [2024-05-17 09:36:30,788] [main] user.language = en
[testng] [2024-05-17 09:36:30,788] [main] user.country = ${user.country}
[testng] [2024-05-17 09:36:30,789] [main] Maximum heap size = 13653 MB
[testng] Scanning for files...
[testng] [2024-05-17 09:36:32,462] [main] ----------------------------------------
[testng] [2024-05-17 09:36:32,462] [main] Total files: 5
[testng] [2024-05-17 09:36:32,462] [main] Scan time: 1.673 s (334 ms/file)
[testng] [2024-05-17 09:36:32,462] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 4 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-05-17 09:36:32,947] [pool-1-thread-1] Initializing /data/joshua/batch1_v1.ct.img.hdr:
[testng] 09:36:32,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 09:36:32,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:36:32,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-17_09-36-32.log]
[testng] 09:36:32,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ba8f376 - End of configuration.
[testng] [2024-05-17 09:36:33,002] [pool-1-thread-4] Initializing /data/samples/rename-test/batch1_v1.ct.img.hdr:
[testng] 09:36:33,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 09:36:33,003 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:36:33,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-17_09-36-33.log]
[testng] 09:36:33,004 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e7ae325 - End of configuration.
[testng] [2024-05-17 09:36:33,022] [pool-1-thread-3] Initializing /data/joshua/batch1_v1.cat.hdr:
[testng] 09:36:33,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 09:36:33,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:36:33,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-17_09-36-33.log]
[testng] 09:36:33,024 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69e61573 - End of configuration.
[testng] [2024-05-17 09:36:33,038] [pool-1-thread-2] Initializing /data/samples/batch1_v1.ct.img.hdr:
[testng] 09:36:33,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 09:36:33,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 09:36:33,039 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-17_09-36-33.log]
[testng] 09:36:33,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a441e3c - End of configuration.
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 212, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 13 seconds
Finished: SUCCESS