Started by upstream project "Trigger" build number 94
originally caused by:
 Started by timer
Running as SYSTEM
Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /uod/idr-scratch/merge-ci
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /uod/idr-scratch/merge-ci/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url git@github.com:openmicroscopy/data_repo_config.git # timeout=10
Fetching upstream changes from git@github.com:openmicroscopy/data_repo_config.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.3'
 > git fetch --tags --force --progress -- git@github.com:openmicroscopy/data_repo_config.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 18c724ee061ee34de2f2398ee77079b7a825e860 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 18c724ee061ee34de2f2398ee77079b7a825e860 # timeout=10
Commit message: "Merge pull request #607 from melissalinkert/columbus-z"
 > git rev-list --no-walk 18c724ee061ee34de2f2398ee77079b7a825e860 # timeout=10
[merge-ci] $ /bin/bash -xe /tmp/jenkins14118987520698932930.sh
+ python3 -mvenv /tmp/venv
+ source /tmp/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/tmp/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/tmp/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ /tmp/venv/bin/pip install -U pip
Requirement already satisfied: pip in /tmp/venv/lib/python3.9/site-packages (24.0)
+ /tmp/venv/bin/pip install -U scc
Requirement already satisfied: scc in /tmp/venv/lib/python3.9/site-packages (0.19.1)
Requirement already satisfied: PyGithub>=1.54 in /tmp/venv/lib/python3.9/site-packages (from scc) (2.3.0)
Requirement already satisfied: PyYAML>=5.1 in /tmp/venv/lib/python3.9/site-packages (from scc) (6.0.1)
Requirement already satisfied: future in /tmp/venv/lib/python3.9/site-packages (from scc) (1.0.0)
Requirement already satisfied: ruamel.yaml in /tmp/venv/lib/python3.9/site-packages (from scc) (0.18.6)
Requirement already satisfied: ruamel.yaml.jinja2 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.7)
Requirement already satisfied: six in /tmp/venv/lib/python3.9/site-packages (from scc) (1.16.0)
Requirement already satisfied: urllib3<2 in /tmp/venv/lib/python3.9/site-packages (from scc) (1.26.18)
Requirement already satisfied: yaclifw<0.3,>=0.2.0 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.0)
Requirement already satisfied: pynacl>=1.4.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.5.0)
Requirement already satisfied: requests>=2.14.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (2.31.0)
Requirement already satisfied: pyjwt>=2.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.8.0)
Requirement already satisfied: typing-extensions>=4.0.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (4.11.0)
Requirement already satisfied: Deprecated in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.2.14)
Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in /tmp/venv/lib/python3.9/site-packages (from ruamel.yaml->scc) (0.2.8)
Requirement already satisfied: cryptography>=3.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (42.0.5)
Requirement already satisfied: cffi>=1.4.1 in /tmp/venv/lib/python3.9/site-packages (from pynacl>=1.4.0->PyGithub>=1.54->scc) (1.16.0)
Requirement already satisfied: charset-normalizer<4,>=2 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.3.2)
Requirement already satisfied: idna<4,>=2.5 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.7)
Requirement already satisfied: certifi>=2017.4.17 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2024.2.2)
Requirement already satisfied: wrapt<2,>=1.10 in /tmp/venv/lib/python3.9/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.16.0)
Requirement already satisfied: pycparser in /tmp/venv/lib/python3.9/site-packages (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) (2.22)
+ test -e src
+ /tmp/venv/bin/scc merge master --no-ask --reset --comment --push merge_ci
2024-06-06 00:00:24,272 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-06-06 00:00:24,272 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-06-06 00:00:24,272 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-06-06 00:00:24,272 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-06-06 00:00:24,272 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-06-06 00:00:30,702 [   scc.merge] INFO  Repository: openmicroscopy/data_repo_config
2024-06-06 00:00:30,702 [   scc.merge] INFO  Excluded PRs:
2024-06-06 00:00:30,702 [   scc.merge] INFO    - PR 611 melissalinkert 'Columbus: use micrometers instead of `reference frame` for plane positions' (label: exclude)
2024-06-06 00:00:30,702 [   scc.merge] INFO    - PR 546 melissalinkert 'InCell updates' (label: exclude)
2024-06-06 00:00:30,702 [   scc.merge] INFO  Already up to date.
2024-06-06 00:00:30,702 [   scc.merge] INFO  
2024-06-06 00:00:30,702 [   scc.merge] INFO  Merged PRs:
2024-06-06 00:00:30,702 [   scc.merge] INFO    - PR 610 melissalinkert 'Add dataset from https://github.com/ome/bioformats/issues/4165'
2024-06-06 00:00:30,702 [   scc.merge] INFO  
2024-06-06 00:00:33,202 [   scc.merge] INFO  Merged branch pushed to https://github.com/snoopycrimecop/data_repo_config/tree/merge_ci
Finished: SUCCESS