Started by upstream project "<a href='/jenkins/job/Trigger/' class='jenkins-table__link model-link model-link--float'>Trigger</a>" build number <a href='/jenkins/job/Trigger/118' class='jenkins-table__link model-link model-link--float'>118</a>
originally caused by:
 Started by timer
<span class="pipeline-new-node" nodeId="2" startId="2">[Pipeline] Start of Pipeline
</span><span class="pipeline-new-node" nodeId="3" startId="3" enclosingId="2">[Pipeline] node
</span><span class="pipeline-node-3">Running on <a href='/jenkins/computer/testintegration/' class='jenkins-table__link model-link model-link--float'>testintegration</a> in /home/omero/workspace/IDRSITE-push
</span><span class="pipeline-new-node" nodeId="4" startId="4" enclosingId="3">[Pipeline] {
</span><span class="pipeline-new-node" nodeId="5" enclosingId="4">[Pipeline] library
</span><span class="pipeline-node-5">Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.47.3'
 &gt; git ls-remote -- <a href='https://github.com/ome/jenkins-library-recursivemerge.git'>https://github.com/ome/jenkins-library-recursivemerge.git</a> # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
 &gt; git rev-parse --resolve-git-dir /var/jenkins_home/jobs/IDRSITE-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10
Fetching changes from the remote Git repository
 &gt; git config remote.origin.url <a href='https://github.com/ome/jenkins-library-recursivemerge.git'>https://github.com/ome/jenkins-library-recursivemerge.git</a> # timeout=10
Fetching without tags
Fetching upstream changes from <a href='https://github.com/ome/jenkins-library-recursivemerge.git'>https://github.com/ome/jenkins-library-recursivemerge.git</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.47.3'
 &gt; git fetch --no-tags --force --progress -- <a href='https://github.com/ome/jenkins-library-recursivemerge.git'>https://github.com/ome/jenkins-library-recursivemerge.git</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
 &gt; git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
</span><span class="pipeline-new-node" nodeId="6" enclosingId="4">[Pipeline] checkout
</span><span class="pipeline-node-6">The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 &gt; git rev-parse --resolve-git-dir /home/omero/workspace/IDRSITE-push/.git # timeout=10
 &gt; git config remote.origin.url <a href='https://github.com/idr/idr.openmicroscopy.org'>https://github.com/idr/idr.openmicroscopy.org</a> # timeout=10
Fetching upstream changes from <a href='https://github.com/idr/idr.openmicroscopy.org'>https://github.com/idr/idr.openmicroscopy.org</a>
 &gt; git --version # timeout=10
 &gt; git --version # 'git version 2.52.0'
 &gt; git fetch --tags --force --progress -- <a href='https://github.com/idr/idr.openmicroscopy.org'>https://github.com/idr/idr.openmicroscopy.org</a> +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 94915ef467774ab056f6df88b2b5d944a6a61c4b (refs/remotes/origin/master)
 &gt; git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 &gt; git config core.sparsecheckout # timeout=10
 &gt; git checkout -f 94915ef467774ab056f6df88b2b5d944a6a61c4b # timeout=10
Commit message: "Merge pull request #229 from pwalczysko/remove-mybinder"
 &gt; git rev-list --no-walk 94915ef467774ab056f6df88b2b5d944a6a61c4b # timeout=10
Cleaning workspace
 &gt; git rev-parse --verify HEAD # timeout=10
Resetting working tree
 &gt; git reset --hard # timeout=10
 &gt; git clean -fdx # timeout=10
</span><span class="pipeline-new-node" nodeId="7" enclosingId="4">[Pipeline] pwd
</span><span class="pipeline-new-node" nodeId="8" enclosingId="4">[Pipeline] sh
</span><span class="pipeline-node-8">+ mkdir -p build
+ echo build
</span><span class="pipeline-new-node" nodeId="9" enclosingId="4">[Pipeline] sh
</span><span class="pipeline-node-9">+ pushd build
~/workspace/IDRSITE-push/build ~/workspace/IDRSITE-push
+ tar -zxf -
+ curl -sfL <a href='https://github.com/ome/build-infra/archive/master.tar.gz'>https://github.com/ome/build-infra/archive/master.tar.gz</a>
+ popd
~/workspace/IDRSITE-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/IDRSITE-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/IDRSITE-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
  Using cached pip-26.2.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 22.3.1
    Uninstalling pip-22.3.1:
      Successfully uninstalled pip-22.3.1
Successfully installed pip-26.2.1
+ python3.11 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub&gt;=1.54 (from scc)
  Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML&gt;=5.1 (from scc)
  Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3&lt;2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw&lt;0.3,&gt;=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl&gt;=1.4.0 (from PyGithub&gt;=1.54-&gt;scc)
  Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB)
Collecting requests&gt;=2.14.0 (from PyGithub&gt;=1.54-&gt;scc)
  Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
Collecting pyjwt&gt;=2.4.0 (from pyjwt[crypto]&gt;=2.4.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached pyjwt-2.15.1-py3-none-any.whl.metadata (3.5 kB)
Collecting typing-extensions&gt;=4.5.0 (from PyGithub&gt;=1.54-&gt;scc)
  Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography&gt;=3.4.0 (from pyjwt[crypto]&gt;=2.4.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.4 kB)
Collecting cffi&gt;=2.0.0 (from cryptography&gt;=3.4.0-&gt;pyjwt[crypto]&gt;=2.4.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB)
Collecting pycparser (from cffi&gt;=2.0.0-&gt;cryptography&gt;=3.4.0-&gt;pyjwt[crypto]&gt;=2.4.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB)
Collecting charset_normalizer&lt;4,&gt;=2 (from requests&gt;=2.14.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (46 kB)
Collecting idna&lt;4,&gt;=2.5 (from requests&gt;=2.14.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB)
Collecting certifi&gt;=2023.5.7 (from requests&gt;=2.14.0-&gt;PyGithub&gt;=1.54-&gt;scc)
  Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.10.0-py3-none-any.whl (455 kB)
Using cached pyjwt-2.15.1-py3-none-any.whl (33 kB)
Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.8 MB)
Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB)
Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.34.2-py3-none-any.whl (73 kB)
Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB)
Using cached idna-3.20-py3-none-any.whl (69 kB)
Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-3.0-py3-none-any.whl (48 kB)
Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc

Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.2 cryptography-50.0.2 future-1.0.0 idna-3.20 pycparser-3.0 pyjwt-2.15.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0
</span><span class="pipeline-new-node" nodeId="10" enclosingId="4">[Pipeline] sh
</span><span class="pipeline-node-10">+ export BASE_REPO=idr.openmicroscopy.org
+ BASE_REPO=idr.openmicroscopy.org
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/IDRSITE-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/IDRSITE-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/IDRSITE-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/IDRSITE-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-10-04 04:25:09,213 [  scc.config] DEBUG Found github.token
2026-10-04 04:25:09,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-10-04 04:25:09,453 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:09,893 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:10,316 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /rate_limit HTTP/1.1" 200 None
2026-10-04 04:25:10,316 [      scc.gh] DEBUG 5000 remaining from 5000 (Reset at 05:10
2026-10-04 04:25:10,317 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-10-04 04:25:10,340 [     scc.git] DEBUG Check current status
2026-10-04 04:25:10,340 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-10-04 04:25:10,377 [     scc.git] DEBUG 94915ef Merge pull request #229 from pwalczysko/remove-mybinder
2026-10-04 04:25:10,378 [     scc.git] DEBUG Calling 'git submodule status'
2026-10-04 04:25:10,599 [  scc.config] DEBUG Found remote.origin.url
2026-10-04 04:25:10,884 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/idr/idr.openmicroscopy.org HTTP/1.1" 200 None
2026-10-04 04:25:11,379 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /orgs/IDR HTTP/1.1" 200 None
2026-10-04 04:25:11,828 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /orgs/IDR/members HTTP/1.1" 200 None
2026-10-04 04:25:11,829 [     scc.git] DEBUG Resetting...
2026-10-04 04:25:11,829 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-10-04 04:25:12,048 [     scc.git] DEBUG HEAD is now at 94915ef Merge pull request #229 from pwalczysko/remove-mybinder
2026-10-04 04:25:12,049 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2026-10-04 04:25:12,212 [     scc.git] DEBUG Check current status
2026-10-04 04:25:12,212 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-10-04 04:25:12,230 [     scc.git] DEBUG 94915ef Merge pull request #229 from pwalczysko/remove-mybinder
2026-10-04 04:25:12,232 [     scc.git] DEBUG Calling 'git submodule status'
2026-10-04 04:25:12,408 [   scc.merge] INFO  Merging Pull Request(s) based on master
2026-10-04 04:25:12,408 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2026-10-04 04:25:12,408 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2026-10-04 04:25:12,408 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2026-10-04 04:25:12,408 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2026-10-04 04:25:12,408 [    scc.repo] DEBUG ## PRs found:
2026-10-04 04:25:12,700 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/pulls HTTP/1.1" 200 None
2026-10-04 04:25:13,263 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/issues/225 HTTP/1.1" 200 None
2026-10-04 04:25:13,761 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/issues/225/comments HTTP/1.1" 200 None
2026-10-04 04:25:13,763 [    scc.repo] DEBUG   - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'
2026-10-04 04:25:13,763 [    scc.repo] DEBUG ## Branches found:
2026-10-04 04:25:13,763 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:13,763 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:13,794 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-10-04 04:25:13,831 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-10-04 04:25:13,831 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-10-04 04:25:13,881 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-10-04 04:25:13,980 [     scc.git] DEBUG Already up to date.

2026-10-04 04:25:13,980 [     scc.git] DEBUG Calling 'git fetch origin pull/225/head'
2026-10-04 04:25:15,348 [     scc.git] DEBUG From <a href='https://github.com/idr/idr.openmicroscopy.org'>https://github.com/idr/idr.openmicroscopy.org</a>
2026-10-04 04:25:15,348 [     scc.git] DEBUG  * branch            refs/pull/225/head -&gt; FETCH_HEAD
2026-10-04 04:25:15,393 [     scc.git] DEBUG ## Unique users: []
2026-10-04 04:25:15,393 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:15,393 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:15,404 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...6f494af3a2b57249d4f647d6abea2d46e25beae5'
2026-10-04 04:25:15,473 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:15,490 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 225 (Fix idr0106 to download from ftp instead of github) 6f494af3a2b57249d4f647d6abea2d46e25beae5'
2026-10-04 04:25:15,778 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2026-10-04 04:25:15,872 [     scc.git] DEBUG  _data/download_urls.tsv | 6 +++---
2026-10-04 04:25:15,872 [     scc.git] DEBUG  1 file changed, 3 insertions(+), 3 deletions(-)
2026-10-04 04:25:16,057 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:16,058 [     scc.git] DEBUG Calling 'git submodule update'
2026-10-04 04:25:16,200 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:16,200 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:16,220 [     scc.git] DEBUG Calling 'git status --porcelain'
2026-10-04 04:25:16,313 [     scc.git] DEBUG &lt;scc.git.GitRepository object at 0x7fbd69b0f590&gt; has no local changes
2026-10-04 04:25:16,313 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: idr/idr.openmicroscopy.org
Already up to date.

Merged PRs:
  - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'

Generated by IDRSITE-push#5 (<a href='https://merge-ci.openmicroscopy.org/jenkins/job/IDRSITE-push/5/'>https://merge-ci.openmicroscopy.org/jenkins/job/IDRSITE-push/5/</a>)'
2026-10-04 04:25:16,561 [     scc.git] DEBUG [detached HEAD 9ffd010] merge master -Dorg -Snone
2026-10-04 04:25:16,563 [   scc.merge] INFO  Repository: idr/idr.openmicroscopy.org
2026-10-04 04:25:16,563 [   scc.merge] INFO  Already up to date.
2026-10-04 04:25:16,563 [   scc.merge] INFO  
2026-10-04 04:25:16,563 [   scc.merge] INFO  Merged PRs:
2026-10-04 04:25:16,563 [   scc.merge] INFO    - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'
2026-10-04 04:25:16,563 [   scc.merge] INFO  
2026-10-04 04:25:16,563 [   scc.merge] DEBUG Cleaning remote branches created for merging
2026-10-04 04:25:16,563 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2026-10-04 04:25:18,252 [  scc.config] DEBUG Found github.token
2026-10-04 04:25:18,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-10-04 04:25:18,496 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:18,984 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:19,409 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /rate_limit HTTP/1.1" 200 None
2026-10-04 04:25:19,410 [      scc.gh] DEBUG 5000 remaining from 5000 (Reset at 05:10
2026-10-04 04:25:19,410 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-10-04 04:25:19,434 [     scc.git] DEBUG Check current status
2026-10-04 04:25:19,434 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-10-04 04:25:19,478 [     scc.git] DEBUG 9ffd010 merge master -Dorg -Snone
2026-10-04 04:25:19,478 [     scc.git] DEBUG Calling 'git submodule status'
2026-10-04 04:25:19,669 [  scc.config] DEBUG Found remote.origin.url
2026-10-04 04:25:19,953 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/idr/idr.openmicroscopy.org HTTP/1.1" 200 None
2026-10-04 04:25:20,486 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /orgs/IDR HTTP/1.1" 200 None
2026-10-04 04:25:20,934 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /orgs/IDR/members HTTP/1.1" 200 None
2026-10-04 04:25:20,935 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-10-04 04:25:21,055 [     scc.git] DEBUG Resetting...
2026-10-04 04:25:21,055 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-10-04 04:25:21,171 [     scc.git] DEBUG HEAD is now at 9ffd010 merge master -Dorg -Snone
2026-10-04 04:25:21,172 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2026-10-04 04:25:21,296 [     scc.git] DEBUG Check current status
2026-10-04 04:25:21,296 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-10-04 04:25:21,312 [     scc.git] DEBUG 9ffd010 merge master -Dorg -Snone
2026-10-04 04:25:21,313 [     scc.git] DEBUG Calling 'git submodule status'
2026-10-04 04:25:21,454 [   scc.merge] INFO  Merging Pull Request(s) based on master
2026-10-04 04:25:21,454 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2026-10-04 04:25:21,454 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2026-10-04 04:25:21,454 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2026-10-04 04:25:21,454 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2026-10-04 04:25:21,454 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2026-10-04 04:25:21,454 [    scc.repo] DEBUG ## PRs found:
2026-10-04 04:25:21,751 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/pulls HTTP/1.1" 200 None
2026-10-04 04:25:22,297 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/issues/225 HTTP/1.1" 200 None
2026-10-04 04:25:22,818 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/issues/225/comments HTTP/1.1" 200 None
2026-10-04 04:25:23,365 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/commits/6f494af3a2b57249d4f647d6abea2d46e25beae5?page=1 HTTP/1.1" 200 None
2026-10-04 04:25:23,907 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/commits/6f494af3a2b57249d4f647d6abea2d46e25beae5/check-suites?app_id=15368&amp;per_page=1 HTTP/1.1" 200 None
2026-10-04 04:25:24,400 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/commits/6f494af3a2b57249d4f647d6abea2d46e25beae5/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-10-04 04:25:24,874 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/commits/6f494af3a2b57249d4f647d6abea2d46e25beae5?page=1 HTTP/1.1" 200 None
2026-10-04 04:25:25,447 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /repos/IDR/idr.openmicroscopy.org/statuses/6f494af3a2b57249d4f647d6abea2d46e25beae5?per_page=1 HTTP/1.1" 200 2
2026-10-04 04:25:25,447 [    scc.repo] DEBUG   - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'
2026-10-04 04:25:25,447 [    scc.repo] DEBUG ## Branches found:
2026-10-04 04:25:25,448 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:25,448 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:25,473 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-10-04 04:25:25,505 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-10-04 04:25:25,505 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-10-04 04:25:25,554 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-10-04 04:25:25,648 [     scc.git] DEBUG Already up to date.

2026-10-04 04:25:25,648 [     scc.git] DEBUG Calling 'git fetch origin pull/225/head'
2026-10-04 04:25:26,539 [     scc.git] DEBUG From <a href='https://github.com/idr/idr.openmicroscopy.org'>https://github.com/idr/idr.openmicroscopy.org</a>
2026-10-04 04:25:26,539 [     scc.git] DEBUG  * branch            refs/pull/225/head -&gt; FETCH_HEAD
2026-10-04 04:25:26,569 [     scc.git] DEBUG ## Unique users: []
2026-10-04 04:25:26,569 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:26,569 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:26,583 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...6f494af3a2b57249d4f647d6abea2d46e25beae5'
2026-10-04 04:25:26,621 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:26,634 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 225 (Fix idr0106 to download from ftp instead of github) 6f494af3a2b57249d4f647d6abea2d46e25beae5'
2026-10-04 04:25:26,691 [     scc.git] DEBUG Already up to date.
2026-10-04 04:25:26,874 [urllib3.conn] DEBUG <a href='https://api.github.com:443'>https://api.github.com:443</a> "GET /user HTTP/1.1" 200 None
2026-10-04 04:25:26,875 [     scc.git] DEBUG Calling 'git submodule update'
2026-10-04 04:25:27,002 [     scc.git] DEBUG Get sha1 of %s
2026-10-04 04:25:27,003 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-10-04 04:25:27,013 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-10-04 04:25:27,119 [     scc.git] DEBUG Calling 'git status --porcelain'
2026-10-04 04:25:27,177 [     scc.git] DEBUG &lt;scc.git.GitRepository object at 0x7f8cdb274390&gt; has no local changes
2026-10-04 04:25:27,177 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: idr/idr.openmicroscopy.org
Already up to date.

Merged PRs:
  - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'

Generated by IDRSITE-push#5 (<a href='https://merge-ci.openmicroscopy.org/jenkins/job/IDRSITE-push/5/'>https://merge-ci.openmicroscopy.org/jenkins/job/IDRSITE-push/5/</a>)'
2026-10-04 04:25:27,320 [     scc.git] DEBUG [detached HEAD 901245b] merge master -Dorg -Ssuccess-only
2026-10-04 04:25:27,322 [   scc.merge] INFO  Repository: idr/idr.openmicroscopy.org
2026-10-04 04:25:27,322 [   scc.merge] INFO  Already up to date.
2026-10-04 04:25:27,322 [   scc.merge] INFO  
2026-10-04 04:25:27,322 [   scc.merge] INFO  Merged PRs:
2026-10-04 04:25:27,322 [   scc.merge] INFO    - PR 225 will-moore 'Fix idr0106 to download from ftp instead of github'
2026-10-04 04:25:27,322 [   scc.merge] INFO  
2026-10-04 04:25:27,322 [   scc.merge] DEBUG Cleaning remote branches created for merging
2026-10-04 04:25:27,322 [     scc.git] DEBUG Calling 'git remote'
Update component versions
grep: build.gradle: No such file or directory
grep: settings.gradle: No such file or directory
grep: build.gradle: No such file or directory
grep: build.gradle: No such file or directory
Up-to-date: 
Commit all component version changes
HEAD detached from 94915ef
nothing to commit, working tree clean
2026-10-04 04:25:35,877 [    scc.push] INFO  Merged branch pushed to <a href='https://github.com/snoopycrimecop/idr.openmicroscopy.org/tree/merge_ci'>https://github.com/snoopycrimecop/idr.openmicroscopy.org/tree/merge_ci</a>
</span><span class="pipeline-new-node" nodeId="11" enclosingId="4">[Pipeline] archiveArtifacts
</span><span class="pipeline-node-11">Archiving artifacts
</span><span class="pipeline-new-node" nodeId="12" startId="4">[Pipeline] }
</span><span class="pipeline-new-node" nodeId="13" startId="3">[Pipeline] // node
</span><span class="pipeline-new-node" nodeId="14" startId="2">[Pipeline] End of Pipeline
</span>Finished: SUCCESS