Started by upstream project "Trigger" build number 6 originally caused by: Started by timer Obtained Jenkinsfile from git https://github.com/snoopycrimecop/omero-build.git [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-build-build [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://github.com/snoopycrimecop/omero-build.git > git init /home/omero/workspace/OMERO-build-build # timeout=10 Fetching upstream changes from https://github.com/snoopycrimecop/omero-build.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/omero-build.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 2640d9953caf2a1f8c49c7689217754d60d6758c (origin/merge_ci) Commit message: "Update component versions" First time build. Skipping changelog. > git config remote.origin.url https://github.com/snoopycrimecop/omero-build.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse origin/merge_ci^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2640d9953caf2a1f8c49c7689217754d60d6758c # timeout=10 > git rev-list --no-walk dd17b749c6835f0a68c38fe1a00de193531bde80 # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 Using shallow submodule update with depth 1 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-model.url # timeout=10 > git config -f .gitmodules --get submodule.omero-model.path # timeout=10 > git config --get submodule.omero-common.url # timeout=10 > git config -f .gitmodules --get submodule.omero-common.path # timeout=10 > git config --get submodule.omero-romio.url # timeout=10 > git config -f .gitmodules --get submodule.omero-romio.path # timeout=10 > git config --get submodule.omero-renderer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-renderer.path # timeout=10 > git config --get submodule.omero-server.url # timeout=10 > git config -f .gitmodules --get submodule.omero-server.path # timeout=10 > git config --get submodule.omero-blitz.url # timeout=10 > git config -f .gitmodules --get submodule.omero-blitz.path # timeout=10 > git config --get submodule.omero-gateway-java.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gateway-java.path # timeout=10 > git submodule update --init --recursive --depth=1 omero-model # timeout=10 > git submodule update --init --recursive --depth=1 omero-common # timeout=10 > git submodule update --init --recursive --depth=1 omero-romio # timeout=10 > git submodule update --init --recursive --depth=1 omero-renderer # timeout=10 > git submodule update --init --recursive --depth=1 omero-server # timeout=10 > git submodule update --init --recursive --depth=1 omero-blitz # timeout=10 > git submodule update --init --recursive --depth=1 omero-gateway-java # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Versions) [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-gradle-plugins-build" build number 11 [Pipeline] sh + mkdir /home/omero/workspace/OMERO-build-build/build + cd /home/omero/workspace/OMERO-build-build/build + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + export PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + cd .. + find . -name version.properties -exec cp '{}' . ';' cp: './version.properties' and './version.properties' are the same file + test -e version.properties + foreach-get-version-as-property [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Build) [Pipeline] sh + gradle --init-script init-ci.gradle publishToMavenLocal --refresh-dependencies To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-romio:processResources NO-SOURCE > Task :omero-renderer:processResources NO-SOURCE > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-common:processResources > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-model:generateEnumsPsql > Task :omero-model:generateHibernatePsql > Task :omero-server:compileSlice > Task :omero-romio:sourcesJar > Task :omero-renderer:sourcesJar > Task :omero-blitz:processResources > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-gateway-java:sourcesJar > Task :omero-common:sourcesJar > Task :omero-server:processResources > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-blitz:sourcesJar > Task :omero-model:generateJavaPsql > Task :omero-model:generateSqlPsql > Task :omero-server:sourcesJar > Task :omero-model:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-model:processResources > Task :omero-model:classes > Task :omero-model:jar > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-model:javadoc > Task :omero-model:javadocJar > Task :omero-model:sourcesJar > Task :omero-model:publishOmeroModelPublicationToMavenLocal > Task :omero-model:publishToMavenLocal > Task :omero-common:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-common:classes > Task :omero-common:jar > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc > Task :omero-common:javadocJar > Task :omero-common:publishOmeroCommonPublicationToMavenLocal > Task :omero-common:publishToMavenLocal > Task :omero-romio:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-romio/src/main/java/ome/io/bioformats/BfPixelBuffer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. > Task :omero-romio:classes > Task :omero-romio:jar > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc > Task :omero-romio:javadocJar > Task :omero-romio:publishOmeroRomioPublicationToMavenLocal > Task :omero-romio:publishToMavenLocal > Task :omero-renderer:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-renderer/src/main/java/omeis/providers/re/Renderer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-renderer:classes > Task :omero-renderer:jar > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc > Task :omero-renderer:javadocJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenLocal > Task :omero-renderer:publishToMavenLocal > Task :omero-server:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-server:classes > Task :omero-server:jar > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:importDatabaseTypes > Task :omero-blitz:importMappings > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() > Task :omero-blitz:generateCombinedPsql > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() > Task :omero-blitz:generateIce > Task :omero-server:javadoc 2 warnings > Task :omero-blitz:copySliceFiles > Task :omero-server:javadocJar > Task :omero-server:publishOmeroServerPublicationToMavenLocal > Task :omero-server:publishToMavenLocal > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql > Task :omero-blitz:generateJava > Task :omero-blitz:generateModelObjectFactoryRegistryPsql > Task :omero-blitz:generatePython > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql > Task :omero-blitz:pythonZip > Task :omero-blitz:compileJava > Task :omero-blitz:compileIcedoc > Task :omero-blitz:zipIcedoc > Task :omero-blitz:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-blitz:classes > Task :omero-blitz:jar > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-gateway-java:compileJava > Task :omero-blitz:javadoc /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreDisp.java:555: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperations.java:402: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperationsNC.java:386: warning - Tag @link: reference not found: #setPixelsId 3 warnings > Task :omero-blitz:javadocJar > Task :omero-blitz:publishOmeroBlitzPublicationToMavenLocal > Task :omero-blitz:publishToMavenLocal > Task :omero-gateway-java:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-gateway-java:classes > Task :omero-gateway-java:jar > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc > Task :omero-gateway-java:javadocJar > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenLocal > Task :omero-gateway-java:publishToMavenLocal > Task :publishToMavenLocal Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 27m 33s [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Deploy) [Pipeline] sh + gradle --init-script init-ci.gradle publish To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-romio:processResources NO-SOURCE > Task :omero-renderer:processResources NO-SOURCE > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-model:generateEnumsPsql UP-TO-DATE > Task :omero-common:processResources UP-TO-DATE > Task :omero-model:generateHibernatePsql UP-TO-DATE > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-blitz:processResources UP-TO-DATE > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-romio:sourcesJar UP-TO-DATE > Task :omero-renderer:sourcesJar UP-TO-DATE > Task :omero-gateway-java:sourcesJar UP-TO-DATE > Task :omero-common:sourcesJar UP-TO-DATE > Task :omero-model:generateJavaPsql UP-TO-DATE > Task :omero-model:generateSqlPsql UP-TO-DATE > Task :omero-server:compileSlice > Task :omero-model:compileJava UP-TO-DATE > Task :omero-server:processResources UP-TO-DATE > Task :omero-model:processResources UP-TO-DATE > Task :omero-model:classes UP-TO-DATE > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-model:jar UP-TO-DATE > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-common:compileJava UP-TO-DATE > Task :omero-common:classes UP-TO-DATE > Task :omero-common:jar UP-TO-DATE > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc UP-TO-DATE > Task :omero-model:javadoc UP-TO-DATE > Task :omero-common:javadocJar UP-TO-DATE > Task :omero-model:javadocJar UP-TO-DATE > Task :omero-model:sourcesJar UP-TO-DATE > Task :omero-server:sourcesJar > Task :omero-common:publishOmeroCommonPublicationToMavenRepository > Task :omero-common:publish > Task :omero-model:publishOmeroModelPublicationToMavenRepository > Task :omero-model:publish > Task :omero-romio:compileJava UP-TO-DATE > Task :omero-romio:classes UP-TO-DATE > Task :omero-romio:jar UP-TO-DATE > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc UP-TO-DATE > Task :omero-romio:javadocJar UP-TO-DATE > Task :omero-romio:publishOmeroRomioPublicationToMavenRepository > Task :omero-romio:publish > Task :omero-renderer:compileJava UP-TO-DATE > Task :omero-renderer:classes UP-TO-DATE > Task :omero-renderer:jar UP-TO-DATE > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc UP-TO-DATE > Task :omero-renderer:javadocJar UP-TO-DATE > Task :omero-blitz:sourcesJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenRepository > Task :omero-renderer:publish > Task :omero-server:compileJava UP-TO-DATE > Task :omero-server:classes UP-TO-DATE > Task :omero-server:jar UP-TO-DATE > Task :omero-blitz:importDatabaseTypes UP-TO-DATE > Task :omero-blitz:importMappings UP-TO-DATE > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:generateCombinedPsql UP-TO-DATE > Task :omero-blitz:generateIce UP-TO-DATE > Task :omero-blitz:copySliceFiles UP-TO-DATE > Task :omero-server:javadoc UP-TO-DATE > Task :omero-server:javadocJar UP-TO-DATE > Task :omero-server:publishOmeroServerPublicationToMavenRepository > Task :omero-server:publish > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql UP-TO-DATE > Task :omero-blitz:generateJava UP-TO-DATE > Task :omero-blitz:generateModelObjectFactoryRegistryPsql UP-TO-DATE > Task :omero-blitz:generatePython UP-TO-DATE > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel UP-TO-DATE > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql UP-TO-DATE > Task :omero-blitz:pythonZip UP-TO-DATE > Task :omero-blitz:compileIcedoc UP-TO-DATE > Task :omero-blitz:zipIcedoc UP-TO-DATE > Task :omero-blitz:compileJava UP-TO-DATE > Task :omero-blitz:classes UP-TO-DATE > Task :omero-blitz:jar UP-TO-DATE > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-blitz:javadoc UP-TO-DATE > Task :omero-blitz:javadocJar UP-TO-DATE > Task :omero-blitz:publishOmeroBlitzPublicationToMavenRepository > Task :omero-blitz:publish > Task :omero-gateway-java:compileJava UP-TO-DATE > Task :omero-gateway-java:classes UP-TO-DATE > Task :omero-gateway-java:jar UP-TO-DATE > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc UP-TO-DATE > Task :omero-gateway-java:javadocJar UP-TO-DATE > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenRepository > Task :omero-gateway-java:publish > Task :publish Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 2m 33s [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] deleteDir [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS